Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav13d-3J3QMG8 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-3J3QMG8 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-3J3QMG8 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-3J3QMG8 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav13d-3J3QMG8 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-3J3QMG8 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-3J3QMG8 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav13d-3J3QMG8 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13d-3J3QMG8 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13d-3J3QMG8 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Trav13d-3J3QMG8 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13d-3J3QMG8 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13d-3J3QMG8 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13d-3J3QMG8 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav13d-3J3QMG8 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13d-3J3QMG8 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13d-3J3QMG8 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.05□□□□□ -0.16
Trav13d-3J3QMG8 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.05□□□□□ -0.16
Trav13d-3J3QMG8 Gm7977-201ENSMUST00000193787 748 ntBASIC14.05□□□□□ -0.16
Trav13d-3J3QMG8 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.05□□□□□ -0.16
Trav13d-3J3QMG8 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav13d-3J3QMG8 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13d-3J3QMG8 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav13d-3J3QMG8 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13d-3J3QMG8 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13d-3J3QMG8 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13d-3J3QMG8 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13d-3J3QMG8 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav13d-3J3QMG8 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13d-3J3QMG8 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav13d-3J3QMG8 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav13d-3J3QMG8 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-3J3QMG8 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav13d-3J3QMG8 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-3J3QMG8 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-3J3QMG8 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-3J3QMG8 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-3J3QMG8 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-3J3QMG8 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav13d-3J3QMG8 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-3J3QMG8 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-3J3QMG8 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-3J3QMG8 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-3J3QMG8 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-3J3QMG8 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-3J3QMG8 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.04□□□□□ -0.16
Trav13d-3J3QMG8 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trav13d-3J3QMG8 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-3J3QMG8 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav13d-3J3QMG8 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-3J3QMG8 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-3J3QMG8 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-3J3QMG8 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-3J3QMG8 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-3J3QMG8 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-3J3QMG8 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-3J3QMG8 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-3J3QMG8 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-3J3QMG8 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav13d-3J3QMG8 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-3J3QMG8 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-3J3QMG8 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav13d-3J3QMG8 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.03□□□□□ -0.16
Trav13d-3J3QMG8 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-3J3QMG8 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-3J3QMG8 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-3J3QMG8 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-3J3QMG8 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.03□□□□□ -0.16
Trav13d-3J3QMG8 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-3J3QMG8 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-3J3QMG8 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-3J3QMG8 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav13d-3J3QMG8 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-3J3QMG8 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-3J3QMG8 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-3J3QMG8 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav13d-3J3QMG8 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-3J3QMG8 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-3J3QMG8 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.03□□□□□ -0.16
Trav13d-3J3QMG8 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-3J3QMG8 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-3J3QMG8 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-3J3QMG8 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-3J3QMG8 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-3J3QMG8 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-3J3QMG8 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav13d-3J3QMG8 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-3J3QMG8 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-3J3QMG8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13d-3J3QMG8 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13d-3J3QMG8 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13d-3J3QMG8 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13d-3J3QMG8 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13d-3J3QMG8 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13d-3J3QMG8 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13d-3J3QMG8 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.02□□□□□ -0.16
Trav13d-3J3QMG8 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13d-3J3QMG8 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13d-3J3QMG8 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms