Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC15.86■□□□□ 0.13
Col6a3E9PWQ3 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Col6a3E9PWQ3 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.86■□□□□ 0.13
Col6a3E9PWQ3 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col6a3E9PWQ3 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Col6a3E9PWQ3 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Col6a3E9PWQ3 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.86■□□□□ 0.13
Col6a3E9PWQ3 Gm10499-201ENSMUST00000174094 934 ntBASIC15.86■□□□□ 0.13
Col6a3E9PWQ3 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Col6a3E9PWQ3 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col6a3E9PWQ3 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Col6a3E9PWQ3 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.86■□□□□ 0.13
Col6a3E9PWQ3 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.86■□□□□ 0.13
Col6a3E9PWQ3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col6a3E9PWQ3 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col6a3E9PWQ3 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col6a3E9PWQ3 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Col6a3E9PWQ3 Gm8399-201ENSMUST00000082300 1117 ntBASIC15.86■□□□□ 0.13
Col6a3E9PWQ3 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Col6a3E9PWQ3 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.86■□□□□ 0.13
Col6a3E9PWQ3 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col6a3E9PWQ3 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col6a3E9PWQ3 Gm11661-201ENSMUST00000121761 1327 ntBASIC15.85■□□□□ 0.13
Col6a3E9PWQ3 Gm16198-201ENSMUST00000118766 670 ntBASIC15.85■□□□□ 0.13
Col6a3E9PWQ3 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC15.85■□□□□ 0.13
Col6a3E9PWQ3 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.85■□□□□ 0.13
Col6a3E9PWQ3 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.85■□□□□ 0.13
Col6a3E9PWQ3 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col6a3E9PWQ3 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col6a3E9PWQ3 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.85■□□□□ 0.13
Col6a3E9PWQ3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col6a3E9PWQ3 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Col6a3E9PWQ3 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.85■□□□□ 0.13
Col6a3E9PWQ3 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col6a3E9PWQ3 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.85■□□□□ 0.13
Col6a3E9PWQ3 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col6a3E9PWQ3 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
Col6a3E9PWQ3 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Col6a3E9PWQ3 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col6a3E9PWQ3 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col6a3E9PWQ3 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col6a3E9PWQ3 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC15.85■□□□□ 0.13
Col6a3E9PWQ3 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Col6a3E9PWQ3 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Col6a3E9PWQ3 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Col6a3E9PWQ3 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col6a3E9PWQ3 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.84■□□□□ 0.13
Col6a3E9PWQ3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col6a3E9PWQ3 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.84■□□□□ 0.13
Col6a3E9PWQ3 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col6a3E9PWQ3 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col6a3E9PWQ3 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.84■□□□□ 0.13
Col6a3E9PWQ3 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Col6a3E9PWQ3 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col6a3E9PWQ3 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.84■□□□□ 0.13
Col6a3E9PWQ3 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col6a3E9PWQ3 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC15.84■□□□□ 0.13
Col6a3E9PWQ3 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col6a3E9PWQ3 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
Col6a3E9PWQ3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.84■□□□□ 0.13
Col6a3E9PWQ3 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.84■□□□□ 0.13
Col6a3E9PWQ3 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Col6a3E9PWQ3 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col6a3E9PWQ3 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col6a3E9PWQ3 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col6a3E9PWQ3 Gm18489-201ENSMUST00000172565 551 ntBASIC15.84■□□□□ 0.13
Col6a3E9PWQ3 Gm37424-201ENSMUST00000191727 561 ntBASIC15.84■□□□□ 0.13
Col6a3E9PWQ3 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col6a3E9PWQ3 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col6a3E9PWQ3 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col6a3E9PWQ3 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Col6a3E9PWQ3 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Col6a3E9PWQ3 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.84■□□□□ 0.13
Col6a3E9PWQ3 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Col6a3E9PWQ3 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Col6a3E9PWQ3 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC15.83■□□□□ 0.13
Col6a3E9PWQ3 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Col6a3E9PWQ3 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Col6a3E9PWQ3 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Col6a3E9PWQ3 Olfr582-201ENSMUST00000098212 960 ntBASIC15.83■□□□□ 0.13
Col6a3E9PWQ3 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col6a3E9PWQ3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Col6a3E9PWQ3 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.83■□□□□ 0.12
Col6a3E9PWQ3 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.83■□□□□ 0.12
Col6a3E9PWQ3 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col6a3E9PWQ3 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Col6a3E9PWQ3 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col6a3E9PWQ3 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col6a3E9PWQ3 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col6a3E9PWQ3 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Col6a3E9PWQ3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col6a3E9PWQ3 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col6a3E9PWQ3 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Col6a3E9PWQ3 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col6a3E9PWQ3 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.82■□□□□ 0.12
Col6a3E9PWQ3 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col6a3E9PWQ3 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col6a3E9PWQ3 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col6a3E9PWQ3 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.82■□□□□ 0.12
Col6a3E9PWQ3 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms