Protein–RNA interactions for Protein: E9PWL0

Trim30d, Tripartite motif-containing 30D, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30dE9PWL0 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim30dE9PWL0 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim30dE9PWL0 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Trim30dE9PWL0 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim30dE9PWL0 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim30dE9PWL0 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Trim30dE9PWL0 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Trim30dE9PWL0 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim30dE9PWL0 Gm10653-202ENSMUST00000139570 835 ntBASIC19.89■□□□□ 0.77
Trim30dE9PWL0 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trim30dE9PWL0 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Trim30dE9PWL0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Trim30dE9PWL0 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trim30dE9PWL0 Gm4217-201ENSMUST00000182243 1002 ntBASIC19.89■□□□□ 0.77
Trim30dE9PWL0 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.89■□□□□ 0.77
Trim30dE9PWL0 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim30dE9PWL0 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trim30dE9PWL0 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim30dE9PWL0 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim30dE9PWL0 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim30dE9PWL0 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim30dE9PWL0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim30dE9PWL0 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim30dE9PWL0 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim30dE9PWL0 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim30dE9PWL0 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Trim30dE9PWL0 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim30dE9PWL0 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim30dE9PWL0 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim30dE9PWL0 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim30dE9PWL0 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim30dE9PWL0 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC19.88■□□□□ 0.77
Trim30dE9PWL0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim30dE9PWL0 Gm44450-201ENSMUST00000199528 114 ntBASIC19.88■□□□□ 0.77
Trim30dE9PWL0 Odf3b-204ENSMUST00000227834 930 ntBASIC19.88■□□□□ 0.77
Trim30dE9PWL0 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim30dE9PWL0 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim30dE9PWL0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim30dE9PWL0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim30dE9PWL0 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Trim30dE9PWL0 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim30dE9PWL0 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Trim30dE9PWL0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim30dE9PWL0 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim30dE9PWL0 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Trim30dE9PWL0 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Trim30dE9PWL0 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim30dE9PWL0 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC19.88■□□□□ 0.77
Trim30dE9PWL0 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim30dE9PWL0 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim30dE9PWL0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim30dE9PWL0 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim30dE9PWL0 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim30dE9PWL0 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim30dE9PWL0 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim30dE9PWL0 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Trim30dE9PWL0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim30dE9PWL0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.87■□□□□ 0.77
Trim30dE9PWL0 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.87■□□□□ 0.77
Trim30dE9PWL0 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.87■□□□□ 0.77
Trim30dE9PWL0 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.87■□□□□ 0.77
Trim30dE9PWL0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim30dE9PWL0 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim30dE9PWL0 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.87■□□□□ 0.77
Trim30dE9PWL0 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.87■□□□□ 0.77
Trim30dE9PWL0 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim30dE9PWL0 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim30dE9PWL0 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trim30dE9PWL0 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trim30dE9PWL0 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC19.87■□□□□ 0.77
Trim30dE9PWL0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim30dE9PWL0 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Trim30dE9PWL0 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim30dE9PWL0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim30dE9PWL0 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Trim30dE9PWL0 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.86■□□□□ 0.77
Trim30dE9PWL0 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim30dE9PWL0 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim30dE9PWL0 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim30dE9PWL0 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim30dE9PWL0 Gm43353-201ENSMUST00000199224 1295 ntBASIC19.86■□□□□ 0.77
Trim30dE9PWL0 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim30dE9PWL0 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim30dE9PWL0 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim30dE9PWL0 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Trim30dE9PWL0 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim30dE9PWL0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim30dE9PWL0 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim30dE9PWL0 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
Trim30dE9PWL0 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.85■□□□□ 0.77
Trim30dE9PWL0 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trim30dE9PWL0 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trim30dE9PWL0 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim30dE9PWL0 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim30dE9PWL0 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim30dE9PWL0 Gm715-201ENSMUST00000117865 831 ntBASIC19.85■□□□□ 0.77
Trim30dE9PWL0 Gm11539-201ENSMUST00000119837 557 ntBASIC19.85■□□□□ 0.77
Trim30dE9PWL0 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC19.85■□□□□ 0.77
Trim30dE9PWL0 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Trim30dE9PWL0 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms