Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.06■□□□□ 0.16
Gm28043E0CXC2 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm28043E0CXC2 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm28043E0CXC2 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.06■□□□□ 0.16
Gm28043E0CXC2 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm28043E0CXC2 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm28043E0CXC2 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Gm28043E0CXC2 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Gm28043E0CXC2 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm28043E0CXC2 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Gm28043E0CXC2 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm28043E0CXC2 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm28043E0CXC2 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Gm28043E0CXC2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm28043E0CXC2 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm28043E0CXC2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm28043E0CXC2 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Gm28043E0CXC2 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm28043E0CXC2 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm28043E0CXC2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Gm28043E0CXC2 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm28043E0CXC2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm28043E0CXC2 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm28043E0CXC2 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Gm28043E0CXC2 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm28043E0CXC2 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm28043E0CXC2 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Gm28043E0CXC2 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.05■□□□□ 0.16
Gm28043E0CXC2 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Gm28043E0CXC2 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.04■□□□□ 0.16
Gm28043E0CXC2 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm28043E0CXC2 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm28043E0CXC2 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Gm28043E0CXC2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Gm28043E0CXC2 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Gm28043E0CXC2 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Gm28043E0CXC2 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm28043E0CXC2 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm28043E0CXC2 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Gm28043E0CXC2 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Gm28043E0CXC2 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Gm28043E0CXC2 Gm13186-201ENSMUST00000118031 316 ntBASIC16.04■□□□□ 0.16
Gm28043E0CXC2 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.04■□□□□ 0.16
Gm28043E0CXC2 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Gm28043E0CXC2 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Gm28043E0CXC2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.04■□□□□ 0.16
Gm28043E0CXC2 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.04■□□□□ 0.16
Gm28043E0CXC2 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm28043E0CXC2 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Gm28043E0CXC2 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Gm28043E0CXC2 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm28043E0CXC2 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm28043E0CXC2 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Gm28043E0CXC2 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.04■□□□□ 0.16
Gm28043E0CXC2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm28043E0CXC2 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm28043E0CXC2 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Gm28043E0CXC2 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm28043E0CXC2 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm28043E0CXC2 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Gm28043E0CXC2 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm28043E0CXC2 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm28043E0CXC2 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm28043E0CXC2 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm28043E0CXC2 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm28043E0CXC2 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Gm28043E0CXC2 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm28043E0CXC2 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm28043E0CXC2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.03■□□□□ 0.16
Gm28043E0CXC2 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Gm28043E0CXC2 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Gm28043E0CXC2 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.03■□□□□ 0.16
Gm28043E0CXC2 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Gm28043E0CXC2 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm28043E0CXC2 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm28043E0CXC2 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm28043E0CXC2 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.03■□□□□ 0.16
Gm28043E0CXC2 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm28043E0CXC2 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm28043E0CXC2 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm28043E0CXC2 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm28043E0CXC2 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm28043E0CXC2 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
Gm28043E0CXC2 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Gm28043E0CXC2 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Gm28043E0CXC2 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Gm28043E0CXC2 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Gm28043E0CXC2 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.02■□□□□ 0.16
Gm28043E0CXC2 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.02■□□□□ 0.16
Gm28043E0CXC2 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Gm28043E0CXC2 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Gm28043E0CXC2 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Gm28043E0CXC2 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Gm28043E0CXC2 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.02■□□□□ 0.16
Gm28043E0CXC2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Gm28043E0CXC2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Gm28043E0CXC2 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Gm28043E0CXC2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Gm28043E0CXC2 Gm10231-201ENSMUST00000181584 441 ntBASIC16.02■□□□□ 0.16
Gm28043E0CXC2 Mir7071-201ENSMUST00000184847 69 ntBASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms