Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a5A6H584 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Col6a5A6H584 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a5A6H584 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a5A6H584 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.99□□□□□ -0.49
Col6a5A6H584 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Col6a5A6H584 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a5A6H584 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC11.99□□□□□ -0.49
Col6a5A6H584 AC166341.4-201ENSMUST00000220625 123 ntBASIC11.99□□□□□ -0.49
Col6a5A6H584 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a5A6H584 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a5A6H584 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a5A6H584 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a5A6H584 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a5A6H584 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Col6a5A6H584 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a5A6H584 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a5A6H584 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a5A6H584 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a5A6H584 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a5A6H584 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a5A6H584 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Col6a5A6H584 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC11.99□□□□□ -0.49
Col6a5A6H584 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a5A6H584 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC11.99□□□□□ -0.49
Col6a5A6H584 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a5A6H584 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC11.99□□□□□ -0.49
Col6a5A6H584 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a5A6H584 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Col6a5A6H584 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC11.98□□□□□ -0.49
Col6a5A6H584 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a5A6H584 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a5A6H584 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a5A6H584 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a5A6H584 Gm11185-201ENSMUST00000117732 1007 ntBASIC11.98□□□□□ -0.49
Col6a5A6H584 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC11.98□□□□□ -0.49
Col6a5A6H584 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.98□□□□□ -0.49
Col6a5A6H584 Gm6218-201ENSMUST00000219812 628 ntBASIC11.98□□□□□ -0.49
Col6a5A6H584 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a5A6H584 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a5A6H584 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a5A6H584 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a5A6H584 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a5A6H584 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a5A6H584 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a5A6H584 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a5A6H584 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a5A6H584 Gm23984-201ENSMUST00000157139 203 ntBASIC11.98□□□□□ -0.49
Col6a5A6H584 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a5A6H584 CT025555.1-201ENSMUST00000225901 1217 ntBASIC11.98□□□□□ -0.49
Col6a5A6H584 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Col6a5A6H584 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a5A6H584 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a5A6H584 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a5A6H584 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a5A6H584 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a5A6H584 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a5A6H584 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Col6a5A6H584 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Col6a5A6H584 Gm15321-201ENSMUST00000121290 288 ntBASIC11.97□□□□□ -0.49
Col6a5A6H584 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a5A6H584 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a5A6H584 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a5A6H584 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a5A6H584 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a5A6H584 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC11.97□□□□□ -0.49
Col6a5A6H584 AC117588.1-201ENSMUST00000228510 999 ntBASIC11.97□□□□□ -0.49
Col6a5A6H584 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC11.97□□□□□ -0.49
Col6a5A6H584 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Col6a5A6H584 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a5A6H584 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a5A6H584 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a5A6H584 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a5A6H584 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Col6a5A6H584 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Col6a5A6H584 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a5A6H584 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a5A6H584 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a5A6H584 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.97□□□□□ -0.49
Col6a5A6H584 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a5A6H584 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a5A6H584 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Col6a5A6H584 Gm17150-201ENSMUST00000165577 381 ntBASIC11.97□□□□□ -0.49
Col6a5A6H584 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Col6a5A6H584 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a5A6H584 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a5A6H584 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Col6a5A6H584 AC131068.2-201ENSMUST00000226175 1453 ntBASIC11.97□□□□□ -0.49
Col6a5A6H584 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a5A6H584 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a5A6H584 Gm18737-201ENSMUST00000173594 937 ntBASIC11.96□□□□□ -0.49
Col6a5A6H584 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.96□□□□□ -0.49
Col6a5A6H584 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.96□□□□□ -0.49
Col6a5A6H584 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.96□□□□□ -0.49
Col6a5A6H584 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Col6a5A6H584 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a5A6H584 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC11.96□□□□□ -0.49
Col6a5A6H584 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a5A6H584 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Col6a5A6H584 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms