Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Ldb3-207ENSMUST00000227819 1499 ntBASIC8.36□□□□□ -1.07
Ubr4A2AN08 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ubr4A2AN08 Hsf1-204ENSMUST00000226872 2104 ntBASIC8.36□□□□□ -1.07
Ubr4A2AN08 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC8.36□□□□□ -1.07
Ubr4A2AN08 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC8.36□□□□□ -1.07
Ubr4A2AN08 AC117588.1-201ENSMUST00000228510 999 ntBASIC8.36□□□□□ -1.07
Ubr4A2AN08 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ubr4A2AN08 Gm29361-201ENSMUST00000183323 2000 ntBASIC8.36□□□□□ -1.07
Ubr4A2AN08 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ubr4A2AN08 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ubr4A2AN08 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC8.36□□□□□ -1.07
Ubr4A2AN08 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ubr4A2AN08 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Ubr4A2AN08 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ubr4A2AN08 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ubr4A2AN08 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ubr4A2AN08 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ubr4A2AN08 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ubr4A2AN08 Gm4984-201ENSMUST00000115987 360 ntBASIC8.36□□□□□ -1.07
Ubr4A2AN08 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Ubr4A2AN08 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC8.36□□□□□ -1.07
Ubr4A2AN08 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ubr4A2AN08 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ubr4A2AN08 Gm18222-201ENSMUST00000202416 1387 ntBASIC8.36□□□□□ -1.07
Ubr4A2AN08 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC8.36□□□□□ -1.07
Ubr4A2AN08 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Ubr4A2AN08 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC8.36□□□□□ -1.07
Ubr4A2AN08 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ubr4A2AN08 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Ubr4A2AN08 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ubr4A2AN08 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Ubr4A2AN08 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ubr4A2AN08 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ubr4A2AN08 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC8.35□□□□□ -1.07
Ubr4A2AN08 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Ubr4A2AN08 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Ubr4A2AN08 Gm12960-201ENSMUST00000120017 1066 ntBASIC8.35□□□□□ -1.07
Ubr4A2AN08 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC8.35□□□□□ -1.07
Ubr4A2AN08 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC8.35□□□□□ -1.07
Ubr4A2AN08 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC8.35□□□□□ -1.07
Ubr4A2AN08 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ubr4A2AN08 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Ubr4A2AN08 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC8.35□□□□□ -1.07
Ubr4A2AN08 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC8.35□□□□□ -1.07
Ubr4A2AN08 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC8.35□□□□□ -1.07
Ubr4A2AN08 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Ubr4A2AN08 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC8.35□□□□□ -1.07
Ubr4A2AN08 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Ubr4A2AN08 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ubr4A2AN08 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC8.35□□□□□ -1.07
Ubr4A2AN08 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ubr4A2AN08 Gm15358-201ENSMUST00000119249 520 ntBASIC8.35□□□□□ -1.07
Ubr4A2AN08 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Ubr4A2AN08 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC8.35□□□□□ -1.07
Ubr4A2AN08 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ubr4A2AN08 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ubr4A2AN08 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Ubr4A2AN08 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ubr4A2AN08 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ubr4A2AN08 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ubr4A2AN08 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ubr4A2AN08 Ldha-ps-201ENSMUST00000119390 995 ntBASIC8.35□□□□□ -1.07
Ubr4A2AN08 Mir8112-201ENSMUST00000184382 131 ntBASIC8.35□□□□□ -1.07
Ubr4A2AN08 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC8.35□□□□□ -1.07
Ubr4A2AN08 CT009718.3-201ENSMUST00000221116 367 ntBASIC8.35□□□□□ -1.07
Ubr4A2AN08 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ubr4A2AN08 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
Ubr4A2AN08 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ubr4A2AN08 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ubr4A2AN08 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ubr4A2AN08 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Ubr4A2AN08 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC8.34□□□□□ -1.07
Ubr4A2AN08 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC8.34□□□□□ -1.07
Ubr4A2AN08 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ubr4A2AN08 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ubr4A2AN08 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Ubr4A2AN08 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ubr4A2AN08 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Ubr4A2AN08 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ubr4A2AN08 Gm5070-201ENSMUST00000177599 862 ntBASIC8.34□□□□□ -1.07
Ubr4A2AN08 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC8.34□□□□□ -1.07
Ubr4A2AN08 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ubr4A2AN08 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ubr4A2AN08 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ubr4A2AN08 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ubr4A2AN08 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ubr4A2AN08 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
Ubr4A2AN08 Gm13015-201ENSMUST00000118674 204 ntBASIC8.34□□□□□ -1.07
Ubr4A2AN08 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC8.34□□□□□ -1.07
Ubr4A2AN08 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Ubr4A2AN08 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ubr4A2AN08 AC238811.1-201ENSMUST00000225302 441 ntBASIC8.34□□□□□ -1.07
Ubr4A2AN08 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC8.34□□□□□ -1.07
Ubr4A2AN08 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ubr4A2AN08 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ubr4A2AN08 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ubr4A2AN08 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ubr4A2AN08 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
Ubr4A2AN08 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Ubr4A2AN08 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC8.34□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms