Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12-1A0N8R1 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav12-1A0N8R1 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Trav12-1A0N8R1 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.36□□□□□ -0.27
Trav12-1A0N8R1 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav12-1A0N8R1 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Trav12-1A0N8R1 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12-1A0N8R1 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav12-1A0N8R1 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12-1A0N8R1 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12-1A0N8R1 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav12-1A0N8R1 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav12-1A0N8R1 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.35□□□□□ -0.27
Trav12-1A0N8R1 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12-1A0N8R1 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12-1A0N8R1 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12-1A0N8R1 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC13.35□□□□□ -0.27
Trav12-1A0N8R1 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.35□□□□□ -0.27
Trav12-1A0N8R1 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12-1A0N8R1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12-1A0N8R1 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12-1A0N8R1 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.35□□□□□ -0.27
Trav12-1A0N8R1 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12-1A0N8R1 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12-1A0N8R1 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12-1A0N8R1 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12-1A0N8R1 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trav12-1A0N8R1 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12-1A0N8R1 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.35□□□□□ -0.27
Trav12-1A0N8R1 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav12-1A0N8R1 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Trav12-1A0N8R1 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav12-1A0N8R1 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav12-1A0N8R1 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav12-1A0N8R1 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav12-1A0N8R1 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav12-1A0N8R1 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Trav12-1A0N8R1 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav12-1A0N8R1 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav12-1A0N8R1 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav12-1A0N8R1 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav12-1A0N8R1 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav12-1A0N8R1 Gm13559-201ENSMUST00000120476 863 ntBASIC13.33□□□□□ -0.28
Trav12-1A0N8R1 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC13.33□□□□□ -0.28
Trav12-1A0N8R1 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav12-1A0N8R1 Gm37055-201ENSMUST00000191866 133 ntBASIC13.33□□□□□ -0.28
Trav12-1A0N8R1 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.33□□□□□ -0.28
Trav12-1A0N8R1 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav12-1A0N8R1 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav12-1A0N8R1 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.33□□□□□ -0.28
Trav12-1A0N8R1 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav12-1A0N8R1 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav12-1A0N8R1 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav12-1A0N8R1 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav12-1A0N8R1 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms