Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smim17A0A504 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smim17A0A504 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smim17A0A504 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smim17A0A504 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smim17A0A504 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Smim17A0A504 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smim17A0A504 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smim17A0A504 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Smim17A0A504 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smim17A0A504 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smim17A0A504 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smim17A0A504 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smim17A0A504 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smim17A0A504 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smim17A0A504 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smim17A0A504 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Smim17A0A504 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smim17A0A504 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smim17A0A504 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.54□□□□□ -0.08
Smim17A0A504 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smim17A0A504 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Smim17A0A504 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smim17A0A504 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.54□□□□□ -0.08
Smim17A0A504 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.54□□□□□ -0.08
Smim17A0A504 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smim17A0A504 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Smim17A0A504 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smim17A0A504 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.54□□□□□ -0.08
Smim17A0A504 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smim17A0A504 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smim17A0A504 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.54□□□□□ -0.08
Smim17A0A504 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smim17A0A504 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smim17A0A504 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
Smim17A0A504 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Smim17A0A504 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smim17A0A504 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC14.54□□□□□ -0.08
Smim17A0A504 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smim17A0A504 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Smim17A0A504 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smim17A0A504 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smim17A0A504 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.54□□□□□ -0.08
Smim17A0A504 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Smim17A0A504 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Smim17A0A504 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smim17A0A504 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smim17A0A504 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smim17A0A504 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smim17A0A504 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smim17A0A504 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smim17A0A504 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smim17A0A504 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smim17A0A504 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smim17A0A504 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smim17A0A504 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smim17A0A504 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smim17A0A504 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smim17A0A504 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smim17A0A504 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Smim17A0A504 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smim17A0A504 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smim17A0A504 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smim17A0A504 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smim17A0A504 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.53□□□□□ -0.08
Smim17A0A504 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smim17A0A504 Mir6349-201ENSMUST00000184059 97 ntBASIC14.53□□□□□ -0.08
Smim17A0A504 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC14.53□□□□□ -0.08
Smim17A0A504 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smim17A0A504 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smim17A0A504 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.53□□□□□ -0.08
Smim17A0A504 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.53□□□□□ -0.08
Smim17A0A504 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smim17A0A504 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smim17A0A504 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smim17A0A504 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smim17A0A504 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smim17A0A504 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Smim17A0A504 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smim17A0A504 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Smim17A0A504 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Smim17A0A504 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smim17A0A504 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Smim17A0A504 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Smim17A0A504 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Smim17A0A504 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smim17A0A504 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smim17A0A504 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC14.52□□□□□ -0.09
Smim17A0A504 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.52□□□□□ -0.09
Smim17A0A504 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Smim17A0A504 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC14.52□□□□□ -0.09
Smim17A0A504 Gm42642-201ENSMUST00000200683 355 ntBASIC14.52□□□□□ -0.09
Smim17A0A504 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.52□□□□□ -0.09
Smim17A0A504 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC14.52□□□□□ -0.09
Smim17A0A504 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.52□□□□□ -0.09
Smim17A0A504 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smim17A0A504 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smim17A0A504 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smim17A0A504 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smim17A0A504 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms