Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhgb8A0A140LI48 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhgb8A0A140LI48 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.48□□□□□ -0.09
Pcdhgb8A0A140LI48 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhgb8A0A140LI48 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Pcdhgb8A0A140LI48 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.48□□□□□ -0.09
Pcdhgb8A0A140LI48 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
Pcdhgb8A0A140LI48 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhgb8A0A140LI48 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhgb8A0A140LI48 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhgb8A0A140LI48 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.48□□□□□ -0.09
Pcdhgb8A0A140LI48 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhgb8A0A140LI48 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhgb8A0A140LI48 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhgb8A0A140LI48 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhgb8A0A140LI48 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhgb8A0A140LI48 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhgb8A0A140LI48 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhgb8A0A140LI48 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhgb8A0A140LI48 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhgb8A0A140LI48 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhgb8A0A140LI48 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhgb8A0A140LI48 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhgb8A0A140LI48 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Pcdhgb8A0A140LI48 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhgb8A0A140LI48 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhgb8A0A140LI48 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhgb8A0A140LI48 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhgb8A0A140LI48 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhgb8A0A140LI48 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhgb8A0A140LI48 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhgb8A0A140LI48 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhgb8A0A140LI48 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhgb8A0A140LI48 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhgb8A0A140LI48 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
Pcdhgb8A0A140LI48 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhgb8A0A140LI48 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Pcdhgb8A0A140LI48 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhgb8A0A140LI48 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhgb8A0A140LI48 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhgb8A0A140LI48 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhgb8A0A140LI48 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhgb8A0A140LI48 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhgb8A0A140LI48 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.47□□□□□ -0.09
Pcdhgb8A0A140LI48 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhgb8A0A140LI48 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhgb8A0A140LI48 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.47□□□□□ -0.09
Pcdhgb8A0A140LI48 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhgb8A0A140LI48 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Pcdhgb8A0A140LI48 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhgb8A0A140LI48 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Pcdhgb8A0A140LI48 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhgb8A0A140LI48 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pcdhgb8A0A140LI48 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhgb8A0A140LI48 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhgb8A0A140LI48 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhgb8A0A140LI48 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhgb8A0A140LI48 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhgb8A0A140LI48 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhgb8A0A140LI48 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.46□□□□□ -0.09
Pcdhgb8A0A140LI48 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhgb8A0A140LI48 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhgb8A0A140LI48 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhgb8A0A140LI48 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Pcdhgb8A0A140LI48 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhgb8A0A140LI48 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhgb8A0A140LI48 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhgb8A0A140LI48 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhgb8A0A140LI48 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Pcdhgb8A0A140LI48 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhgb8A0A140LI48 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhgb8A0A140LI48 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Pcdhgb8A0A140LI48 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Pcdhgb8A0A140LI48 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhgb8A0A140LI48 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdhgb8A0A140LI48 Gm21559-201ENSMUST00000220638 855 ntBASIC14.46□□□□□ -0.09
Pcdhgb8A0A140LI48 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.46□□□□□ -0.09
Pcdhgb8A0A140LI48 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhgb8A0A140LI48 Gm8587-201ENSMUST00000076538 843 ntBASIC14.46□□□□□ -0.09
Pcdhgb8A0A140LI48 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.46□□□□□ -0.09
Pcdhgb8A0A140LI48 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhgb8A0A140LI48 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhgb8A0A140LI48 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Pcdhgb8A0A140LI48 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhgb8A0A140LI48 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhgb8A0A140LI48 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhgb8A0A140LI48 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhgb8A0A140LI48 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhgb8A0A140LI48 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhgb8A0A140LI48 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhgb8A0A140LI48 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhgb8A0A140LI48 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdhgb8A0A140LI48 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhgb8A0A140LI48 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhgb8A0A140LI48 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhgb8A0A140LI48 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhgb8A0A140LI48 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhgb8A0A140LI48 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Pcdhgb8A0A140LI48 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhgb8A0A140LI48 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms