Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.99□□□□□ -0.33
Trav13n-4A0A0G2JG01 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-4A0A0G2JG01 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-4A0A0G2JG01 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-4A0A0G2JG01 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Trav13n-4A0A0G2JG01 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-4A0A0G2JG01 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-4A0A0G2JG01 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-4A0A0G2JG01 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-4A0A0G2JG01 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-4A0A0G2JG01 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-4A0A0G2JG01 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav13n-4A0A0G2JG01 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav13n-4A0A0G2JG01 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav13n-4A0A0G2JG01 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-4A0A0G2JG01 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-4A0A0G2JG01 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav13n-4A0A0G2JG01 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 Spr-ps1-201ENSMUST00000089584 605 ntBASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.98□□□□□ -0.33
Trav13n-4A0A0G2JG01 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-4A0A0G2JG01 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-4A0A0G2JG01 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-4A0A0G2JG01 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-4A0A0G2JG01 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-4A0A0G2JG01 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-4A0A0G2JG01 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Trav13n-4A0A0G2JG01 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-4A0A0G2JG01 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-4A0A0G2JG01 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-4A0A0G2JG01 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-4A0A0G2JG01 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-4A0A0G2JG01 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-4A0A0G2JG01 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-4A0A0G2JG01 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-4A0A0G2JG01 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Trav13n-4A0A0G2JG01 Gm24589-201ENSMUST00000116692 94 ntBASIC12.97□□□□□ -0.33
Trav13n-4A0A0G2JG01 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav13n-4A0A0G2JG01 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav13n-4A0A0G2JG01 Gm45328-201ENSMUST00000210942 917 ntBASIC12.97□□□□□ -0.33
Trav13n-4A0A0G2JG01 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-4A0A0G2JG01 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-4A0A0G2JG01 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-4A0A0G2JG01 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-4A0A0G2JG01 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-4A0A0G2JG01 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-4A0A0G2JG01 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Trav13n-4A0A0G2JG01 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-4A0A0G2JG01 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.97□□□□□ -0.33
Trav13n-4A0A0G2JG01 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-4A0A0G2JG01 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav13n-4A0A0G2JG01 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13n-4A0A0G2JG01 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav13n-4A0A0G2JG01 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav13n-4A0A0G2JG01 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav13n-4A0A0G2JG01 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13n-4A0A0G2JG01 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13n-4A0A0G2JG01 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav13n-4A0A0G2JG01 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav13n-4A0A0G2JG01 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.96□□□□□ -0.33
Trav13n-4A0A0G2JG01 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms