Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ighv1-42A0A0A6YY38 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ighv1-42A0A0A6YY38 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.72□□□□□ -0.05
Ighv1-42A0A0A6YY38 Gm2213-201ENSMUST00000197485 688 ntBASIC14.72□□□□□ -0.05
Ighv1-42A0A0A6YY38 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ighv1-42A0A0A6YY38 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ighv1-42A0A0A6YY38 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ighv1-42A0A0A6YY38 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ighv1-42A0A0A6YY38 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ighv1-42A0A0A6YY38 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ighv1-42A0A0A6YY38 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ighv1-42A0A0A6YY38 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ighv1-42A0A0A6YY38 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Ighv1-42A0A0A6YY38 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.72□□□□□ -0.05
Ighv1-42A0A0A6YY38 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.71□□□□□ -0.05
Ighv1-42A0A0A6YY38 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ighv1-42A0A0A6YY38 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Ighv1-42A0A0A6YY38 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ighv1-42A0A0A6YY38 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ighv1-42A0A0A6YY38 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ighv1-42A0A0A6YY38 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Ighv1-42A0A0A6YY38 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ighv1-42A0A0A6YY38 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Ighv1-42A0A0A6YY38 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.71□□□□□ -0.05
Ighv1-42A0A0A6YY38 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ighv1-42A0A0A6YY38 Gm11594-201ENSMUST00000122313 162 ntBASIC14.71□□□□□ -0.05
Ighv1-42A0A0A6YY38 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.71□□□□□ -0.05
Ighv1-42A0A0A6YY38 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.71□□□□□ -0.05
Ighv1-42A0A0A6YY38 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.71□□□□□ -0.05
Ighv1-42A0A0A6YY38 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Ighv1-42A0A0A6YY38 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Ighv1-42A0A0A6YY38 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.71□□□□□ -0.05
Ighv1-42A0A0A6YY38 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.71□□□□□ -0.05
Ighv1-42A0A0A6YY38 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.71□□□□□ -0.05
Ighv1-42A0A0A6YY38 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ighv1-42A0A0A6YY38 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.71□□□□□ -0.05
Ighv1-42A0A0A6YY38 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ighv1-42A0A0A6YY38 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ighv1-42A0A0A6YY38 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ighv1-42A0A0A6YY38 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ighv1-42A0A0A6YY38 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ighv1-42A0A0A6YY38 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Ighv1-42A0A0A6YY38 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ighv1-42A0A0A6YY38 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ighv1-42A0A0A6YY38 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Ighv1-42A0A0A6YY38 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Ighv1-42A0A0A6YY38 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Ighv1-42A0A0A6YY38 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ighv1-42A0A0A6YY38 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ighv1-42A0A0A6YY38 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ighv1-42A0A0A6YY38 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.7□□□□□ -0.06
Ighv1-42A0A0A6YY38 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ighv1-42A0A0A6YY38 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ighv1-42A0A0A6YY38 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ighv1-42A0A0A6YY38 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.7□□□□□ -0.06
Ighv1-42A0A0A6YY38 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Ighv1-42A0A0A6YY38 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ighv1-42A0A0A6YY38 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.7□□□□□ -0.06
Ighv1-42A0A0A6YY38 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ighv1-42A0A0A6YY38 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.7□□□□□ -0.06
Ighv1-42A0A0A6YY38 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.7□□□□□ -0.06
Ighv1-42A0A0A6YY38 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ighv1-42A0A0A6YY38 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ighv1-42A0A0A6YY38 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ighv1-42A0A0A6YY38 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ighv1-42A0A0A6YY38 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Ighv1-42A0A0A6YY38 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Ighv1-42A0A0A6YY38 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ighv1-42A0A0A6YY38 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ighv1-42A0A0A6YY38 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ighv1-42A0A0A6YY38 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ighv1-42A0A0A6YY38 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ighv1-42A0A0A6YY38 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.7□□□□□ -0.06
Ighv1-42A0A0A6YY38 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.7□□□□□ -0.06
Ighv1-42A0A0A6YY38 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
Ighv1-42A0A0A6YY38 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ighv1-42A0A0A6YY38 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ighv1-42A0A0A6YY38 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ighv1-42A0A0A6YY38 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Ighv1-42A0A0A6YY38 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ighv1-42A0A0A6YY38 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ighv1-42A0A0A6YY38 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.69□□□□□ -0.06
Ighv1-42A0A0A6YY38 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Ighv1-42A0A0A6YY38 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ighv1-42A0A0A6YY38 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ighv1-42A0A0A6YY38 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ighv1-42A0A0A6YY38 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ighv1-42A0A0A6YY38 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ighv1-42A0A0A6YY38 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ighv1-42A0A0A6YY38 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ighv1-42A0A0A6YY38 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ighv1-42A0A0A6YY38 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Ighv1-42A0A0A6YY38 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ighv1-42A0A0A6YY38 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ighv1-42A0A0A6YY38 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ighv1-42A0A0A6YY38 Gm5682-201ENSMUST00000173402 505 ntBASIC14.69□□□□□ -0.06
Ighv1-42A0A0A6YY38 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.69□□□□□ -0.06
Ighv1-42A0A0A6YY38 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ighv1-42A0A0A6YY38 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ighv1-42A0A0A6YY38 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms