Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbc1A0A0A6YWV4 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbc1A0A0A6YWV4 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbc1A0A0A6YWV4 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trbc1A0A0A6YWV4 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbc1A0A0A6YWV4 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trbc1A0A0A6YWV4 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbc1A0A0A6YWV4 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbc1A0A0A6YWV4 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trbc1A0A0A6YWV4 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trbc1A0A0A6YWV4 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbc1A0A0A6YWV4 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trbc1A0A0A6YWV4 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbc1A0A0A6YWV4 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trbc1A0A0A6YWV4 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbc1A0A0A6YWV4 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbc1A0A0A6YWV4 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.69□□□□□ -0.06
Trbc1A0A0A6YWV4 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbc1A0A0A6YWV4 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trbc1A0A0A6YWV4 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.69□□□□□ -0.06
Trbc1A0A0A6YWV4 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbc1A0A0A6YWV4 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.69□□□□□ -0.06
Trbc1A0A0A6YWV4 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trbc1A0A0A6YWV4 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbc1A0A0A6YWV4 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbc1A0A0A6YWV4 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbc1A0A0A6YWV4 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbc1A0A0A6YWV4 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbc1A0A0A6YWV4 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbc1A0A0A6YWV4 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Trbc1A0A0A6YWV4 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.69□□□□□ -0.06
Trbc1A0A0A6YWV4 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trbc1A0A0A6YWV4 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbc1A0A0A6YWV4 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbc1A0A0A6YWV4 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trbc1A0A0A6YWV4 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbc1A0A0A6YWV4 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbc1A0A0A6YWV4 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trbc1A0A0A6YWV4 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbc1A0A0A6YWV4 Gm13312-201ENSMUST00000119631 718 ntBASIC14.68□□□□□ -0.06
Trbc1A0A0A6YWV4 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.68□□□□□ -0.06
Trbc1A0A0A6YWV4 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbc1A0A0A6YWV4 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.68□□□□□ -0.06
Trbc1A0A0A6YWV4 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trbc1A0A0A6YWV4 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.68□□□□□ -0.06
Trbc1A0A0A6YWV4 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trbc1A0A0A6YWV4 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbc1A0A0A6YWV4 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Trbc1A0A0A6YWV4 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbc1A0A0A6YWV4 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbc1A0A0A6YWV4 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbc1A0A0A6YWV4 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Trbc1A0A0A6YWV4 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.68□□□□□ -0.06
Trbc1A0A0A6YWV4 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trbc1A0A0A6YWV4 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trbc1A0A0A6YWV4 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Trbc1A0A0A6YWV4 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbc1A0A0A6YWV4 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbc1A0A0A6YWV4 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbc1A0A0A6YWV4 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbc1A0A0A6YWV4 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbc1A0A0A6YWV4 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.67□□□□□ -0.06
Trbc1A0A0A6YWV4 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trbc1A0A0A6YWV4 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trbc1A0A0A6YWV4 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbc1A0A0A6YWV4 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
Trbc1A0A0A6YWV4 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.67□□□□□ -0.06
Trbc1A0A0A6YWV4 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbc1A0A0A6YWV4 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbc1A0A0A6YWV4 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trbc1A0A0A6YWV4 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.67□□□□□ -0.06
Trbc1A0A0A6YWV4 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Trbc1A0A0A6YWV4 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Rprl3-201ENSMUST00000157400 290 ntBASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbc1A0A0A6YWV4 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms