Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav6d-5A0A075B6B9 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Trav6d-5A0A075B6B9 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-5A0A075B6B9 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav6d-5A0A075B6B9 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-5A0A075B6B9 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav6d-5A0A075B6B9 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-5A0A075B6B9 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-5A0A075B6B9 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-5A0A075B6B9 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-5A0A075B6B9 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav6d-5A0A075B6B9 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-5A0A075B6B9 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-5A0A075B6B9 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-5A0A075B6B9 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-5A0A075B6B9 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-5A0A075B6B9 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-5A0A075B6B9 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-5A0A075B6B9 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-5A0A075B6B9 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-5A0A075B6B9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav6d-5A0A075B6B9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav6d-5A0A075B6B9 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.92□□□□□ -0.34
Trav6d-5A0A075B6B9 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav6d-5A0A075B6B9 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-5A0A075B6B9 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-5A0A075B6B9 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-5A0A075B6B9 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav6d-5A0A075B6B9 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav6d-5A0A075B6B9 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Gm10602-201ENSMUST00000098239 609 ntBASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav6d-5A0A075B6B9 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav6d-5A0A075B6B9 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-5A0A075B6B9 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Trav6d-5A0A075B6B9 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav6d-5A0A075B6B9 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-5A0A075B6B9 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-5A0A075B6B9 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-5A0A075B6B9 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-5A0A075B6B9 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-5A0A075B6B9 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-5A0A075B6B9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-5A0A075B6B9 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav6d-5A0A075B6B9 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trav6d-5A0A075B6B9 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.9□□□□□ -0.34
Trav6d-5A0A075B6B9 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-5A0A075B6B9 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-5A0A075B6B9 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-5A0A075B6B9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-5A0A075B6B9 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-5A0A075B6B9 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-5A0A075B6B9 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav6d-5A0A075B6B9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-5A0A075B6B9 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav6d-5A0A075B6B9 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.9□□□□□ -0.34
Trav6d-5A0A075B6B9 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-5A0A075B6B9 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav6d-5A0A075B6B9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC12.9□□□□□ -0.34
Trav6d-5A0A075B6B9 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav6d-5A0A075B6B9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms