Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav6-5A0A075B6B5 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-5A0A075B6B5 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6-5A0A075B6B5 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Trav6-5A0A075B6B5 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-5A0A075B6B5 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-5A0A075B6B5 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-5A0A075B6B5 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-5A0A075B6B5 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav6-5A0A075B6B5 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-5A0A075B6B5 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-5A0A075B6B5 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-5A0A075B6B5 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-5A0A075B6B5 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-5A0A075B6B5 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-5A0A075B6B5 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-5A0A075B6B5 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav6-5A0A075B6B5 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav6-5A0A075B6B5 Gm11249-201ENSMUST00000117071 859 ntBASIC12.41□□□□□ -0.42
Trav6-5A0A075B6B5 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-5A0A075B6B5 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-5A0A075B6B5 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-5A0A075B6B5 Gm44672-201ENSMUST00000206944 1098 ntBASIC12.41□□□□□ -0.42
Trav6-5A0A075B6B5 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.41□□□□□ -0.42
Trav6-5A0A075B6B5 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-5A0A075B6B5 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-5A0A075B6B5 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav6-5A0A075B6B5 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-5A0A075B6B5 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-5A0A075B6B5 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav6-5A0A075B6B5 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav6-5A0A075B6B5 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-5A0A075B6B5 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-5A0A075B6B5 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-5A0A075B6B5 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-5A0A075B6B5 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-5A0A075B6B5 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-5A0A075B6B5 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6-5A0A075B6B5 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-5A0A075B6B5 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav6-5A0A075B6B5 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-5A0A075B6B5 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-5A0A075B6B5 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-5A0A075B6B5 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-5A0A075B6B5 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-5A0A075B6B5 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-5A0A075B6B5 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav6-5A0A075B6B5 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-5A0A075B6B5 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-5A0A075B6B5 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav6-5A0A075B6B5 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-5A0A075B6B5 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav6-5A0A075B6B5 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-5A0A075B6B5 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav6-5A0A075B6B5 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-5A0A075B6B5 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav6-5A0A075B6B5 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-5A0A075B6B5 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-5A0A075B6B5 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav6-5A0A075B6B5 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav6-5A0A075B6B5 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.4□□□□□ -0.42
Trav6-5A0A075B6B5 Mir5133-201ENSMUST00000174955 77 ntBASIC12.4□□□□□ -0.42
Trav6-5A0A075B6B5 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-5A0A075B6B5 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-5A0A075B6B5 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav6-5A0A075B6B5 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-5A0A075B6B5 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-5A0A075B6B5 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-5A0A075B6B5 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6-5A0A075B6B5 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trav6-5A0A075B6B5 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav6-5A0A075B6B5 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav6-5A0A075B6B5 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-5A0A075B6B5 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav6-5A0A075B6B5 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-5A0A075B6B5 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-5A0A075B6B5 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-5A0A075B6B5 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-5A0A075B6B5 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-5A0A075B6B5 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-5A0A075B6B5 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-5A0A075B6B5 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-5A0A075B6B5 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Trav6-5A0A075B6B5 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-5A0A075B6B5 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-5A0A075B6B5 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Trav6-5A0A075B6B5 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav6-5A0A075B6B5 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav6-5A0A075B6B5 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-5A0A075B6B5 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-5A0A075B6B5 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-5A0A075B6B5 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav6-5A0A075B6B5 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-5A0A075B6B5 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-5A0A075B6B5 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-5A0A075B6B5 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav6-5A0A075B6B5 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.39□□□□□ -0.43
Trav6-5A0A075B6B5 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-5A0A075B6B5 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6-5A0A075B6B5 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms