Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Trav12d-3A0A075B6A4 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-3A0A075B6A4 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Trav12d-3A0A075B6A4 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-3A0A075B6A4 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-3A0A075B6A4 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-3A0A075B6A4 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav12d-3A0A075B6A4 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-3A0A075B6A4 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-3A0A075B6A4 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav12d-3A0A075B6A4 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-3A0A075B6A4 Gm17661-201ENSMUST00000170317 270 ntBASIC11.97□□□□□ -0.49
Trav12d-3A0A075B6A4 Gm43017-201ENSMUST00000198296 752 ntBASIC11.97□□□□□ -0.49
Trav12d-3A0A075B6A4 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-3A0A075B6A4 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-3A0A075B6A4 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-3A0A075B6A4 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-3A0A075B6A4 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav12d-3A0A075B6A4 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-3A0A075B6A4 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-3A0A075B6A4 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-3A0A075B6A4 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-3A0A075B6A4 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-3A0A075B6A4 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav12d-3A0A075B6A4 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-3A0A075B6A4 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-3A0A075B6A4 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-3A0A075B6A4 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav12d-3A0A075B6A4 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC11.97□□□□□ -0.49
Trav12d-3A0A075B6A4 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav12d-3A0A075B6A4 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12d-3A0A075B6A4 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12d-3A0A075B6A4 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav12d-3A0A075B6A4 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trav12d-3A0A075B6A4 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12d-3A0A075B6A4 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12d-3A0A075B6A4 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12d-3A0A075B6A4 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12d-3A0A075B6A4 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12d-3A0A075B6A4 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12d-3A0A075B6A4 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12d-3A0A075B6A4 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav12d-3A0A075B6A4 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav12d-3A0A075B6A4 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav12d-3A0A075B6A4 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav12d-3A0A075B6A4 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav12d-3A0A075B6A4 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav12d-3A0A075B6A4 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav12d-3A0A075B6A4 Gm12620-201ENSMUST00000119791 1986 ntBASIC11.96□□□□□ -0.5
Trav12d-3A0A075B6A4 Gm12612-201ENSMUST00000140182 1986 ntBASIC11.96□□□□□ -0.5
Trav12d-3A0A075B6A4 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav12d-3A0A075B6A4 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav12d-3A0A075B6A4 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav12d-3A0A075B6A4 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav12d-3A0A075B6A4 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-3A0A075B6A4 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-3A0A075B6A4 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-3A0A075B6A4 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav12d-3A0A075B6A4 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-3A0A075B6A4 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-3A0A075B6A4 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Trav12d-3A0A075B6A4 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Trav12d-3A0A075B6A4 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-3A0A075B6A4 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav12d-3A0A075B6A4 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-3A0A075B6A4 Gm14464-201ENSMUST00000119658 1254 ntBASIC11.95□□□□□ -0.5
Trav12d-3A0A075B6A4 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav12d-3A0A075B6A4 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC11.95□□□□□ -0.5
Trav12d-3A0A075B6A4 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-3A0A075B6A4 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-3A0A075B6A4 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC11.95□□□□□ -0.5
Trav12d-3A0A075B6A4 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-3A0A075B6A4 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-3A0A075B6A4 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-3A0A075B6A4 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-3A0A075B6A4 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-3A0A075B6A4 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-3A0A075B6A4 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-3A0A075B6A4 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-3A0A075B6A4 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-3A0A075B6A4 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-3A0A075B6A4 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-3A0A075B6A4 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav12d-3A0A075B6A4 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-3A0A075B6A4 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-3A0A075B6A4 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-3A0A075B6A4 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-3A0A075B6A4 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav12d-3A0A075B6A4 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-3A0A075B6A4 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-3A0A075B6A4 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-3A0A075B6A4 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Trav12d-3A0A075B6A4 Efs-202ENSMUST00000227037 2540 ntBASIC11.94□□□□□ -0.5
Trav12d-3A0A075B6A4 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-3A0A075B6A4 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-3A0A075B6A4 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-3A0A075B6A4 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trav12d-3A0A075B6A4 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-3A0A075B6A4 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav12d-3A0A075B6A4 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms