Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav18A0A075B656 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav18A0A075B656 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav18A0A075B656 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav18A0A075B656 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav18A0A075B656 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav18A0A075B656 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.12□□□□□ -0.31
Trav18A0A075B656 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.12□□□□□ -0.31
Trav18A0A075B656 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav18A0A075B656 Gm45058-201ENSMUST00000205810 766 ntBASIC13.12□□□□□ -0.31
Trav18A0A075B656 Gm18959-201ENSMUST00000208954 655 ntBASIC13.12□□□□□ -0.31
Trav18A0A075B656 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav18A0A075B656 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav18A0A075B656 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
Trav18A0A075B656 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav18A0A075B656 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav18A0A075B656 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav18A0A075B656 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav18A0A075B656 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav18A0A075B656 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav18A0A075B656 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav18A0A075B656 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav18A0A075B656 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav18A0A075B656 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav18A0A075B656 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav18A0A075B656 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav18A0A075B656 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav18A0A075B656 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav18A0A075B656 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav18A0A075B656 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav18A0A075B656 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.11□□□□□ -0.31
Trav18A0A075B656 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav18A0A075B656 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav18A0A075B656 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav18A0A075B656 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav18A0A075B656 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav18A0A075B656 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.11□□□□□ -0.31
Trav18A0A075B656 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav18A0A075B656 Gm43799-201ENSMUST00000201845 579 ntBASIC13.11□□□□□ -0.31
Trav18A0A075B656 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav18A0A075B656 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav18A0A075B656 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav18A0A075B656 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav18A0A075B656 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav18A0A075B656 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trav18A0A075B656 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav18A0A075B656 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav18A0A075B656 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Trav18A0A075B656 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav18A0A075B656 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav18A0A075B656 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.11□□□□□ -0.31
Trav18A0A075B656 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav18A0A075B656 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav18A0A075B656 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav18A0A075B656 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav18A0A075B656 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav18A0A075B656 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav18A0A075B656 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.1□□□□□ -0.31
Trav18A0A075B656 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav18A0A075B656 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav18A0A075B656 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav18A0A075B656 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav18A0A075B656 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav18A0A075B656 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav18A0A075B656 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav18A0A075B656 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav18A0A075B656 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav18A0A075B656 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.1□□□□□ -0.31
Trav18A0A075B656 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav18A0A075B656 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.1□□□□□ -0.31
Trav18A0A075B656 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav18A0A075B656 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav18A0A075B656 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav18A0A075B656 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav18A0A075B656 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav18A0A075B656 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav18A0A075B656 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav18A0A075B656 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav18A0A075B656 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trav18A0A075B656 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav18A0A075B656 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav18A0A075B656 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav18A0A075B656 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav18A0A075B656 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.1□□□□□ -0.31
Trav18A0A075B656 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav18A0A075B656 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav18A0A075B656 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav18A0A075B656 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav18A0A075B656 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav18A0A075B656 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav18A0A075B656 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav18A0A075B656 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav18A0A075B656 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC13.09□□□□□ -0.31
Trav18A0A075B656 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav18A0A075B656 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav18A0A075B656 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
Trav18A0A075B656 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.09□□□□□ -0.31
Trav18A0A075B656 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav18A0A075B656 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav18A0A075B656 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms