Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav5-4A0A075B652 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-4A0A075B652 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-4A0A075B652 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-4A0A075B652 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav5-4A0A075B652 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav5-4A0A075B652 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5-4A0A075B652 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav5-4A0A075B652 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5-4A0A075B652 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5-4A0A075B652 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5-4A0A075B652 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5-4A0A075B652 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5-4A0A075B652 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5-4A0A075B652 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5-4A0A075B652 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5-4A0A075B652 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.38□□□□□ -0.27
Trav5-4A0A075B652 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.38□□□□□ -0.27
Trav5-4A0A075B652 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5-4A0A075B652 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC13.38□□□□□ -0.27
Trav5-4A0A075B652 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5-4A0A075B652 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trav5-4A0A075B652 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5-4A0A075B652 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav5-4A0A075B652 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5-4A0A075B652 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav5-4A0A075B652 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5-4A0A075B652 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5-4A0A075B652 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5-4A0A075B652 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav5-4A0A075B652 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5-4A0A075B652 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5-4A0A075B652 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav5-4A0A075B652 Gm8668-201ENSMUST00000120559 1447 ntBASIC13.38□□□□□ -0.27
Trav5-4A0A075B652 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
Trav5-4A0A075B652 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav5-4A0A075B652 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5-4A0A075B652 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5-4A0A075B652 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Trav5-4A0A075B652 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5-4A0A075B652 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5-4A0A075B652 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Trav5-4A0A075B652 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5-4A0A075B652 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5-4A0A075B652 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5-4A0A075B652 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5-4A0A075B652 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5-4A0A075B652 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5-4A0A075B652 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Trav5-4A0A075B652 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Trav5-4A0A075B652 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trav5-4A0A075B652 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav5-4A0A075B652 Gm27389-201ENSMUST00000183622 195 ntBASIC13.37□□□□□ -0.27
Trav5-4A0A075B652 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5-4A0A075B652 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5-4A0A075B652 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav5-4A0A075B652 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Trav5-4A0A075B652 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5-4A0A075B652 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5-4A0A075B652 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav5-4A0A075B652 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5-4A0A075B652 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Trav5-4A0A075B652 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.37□□□□□ -0.27
Trav5-4A0A075B652 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav5-4A0A075B652 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5-4A0A075B652 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5-4A0A075B652 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav5-4A0A075B652 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav5-4A0A075B652 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-4A0A075B652 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav5-4A0A075B652 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav5-4A0A075B652 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-4A0A075B652 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-4A0A075B652 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav5-4A0A075B652 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav5-4A0A075B652 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-4A0A075B652 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav5-4A0A075B652 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.36□□□□□ -0.27
Trav5-4A0A075B652 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-4A0A075B652 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav5-4A0A075B652 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-4A0A075B652 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-4A0A075B652 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.36□□□□□ -0.27
Trav5-4A0A075B652 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-4A0A075B652 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trav5-4A0A075B652 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav5-4A0A075B652 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.36□□□□□ -0.27
Trav5-4A0A075B652 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.36□□□□□ -0.27
Trav5-4A0A075B652 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav5-4A0A075B652 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav5-4A0A075B652 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-4A0A075B652 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-4A0A075B652 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-4A0A075B652 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-4A0A075B652 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-4A0A075B652 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-4A0A075B652 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-4A0A075B652 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-4A0A075B652 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav5-4A0A075B652 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms