Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4-4-dv10A0A075B651 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4-4-dv10A0A075B651 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4-4-dv10A0A075B651 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4-4-dv10A0A075B651 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4-4-dv10A0A075B651 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4-4-dv10A0A075B651 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4-4-dv10A0A075B651 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav4-4-dv10A0A075B651 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4-4-dv10A0A075B651 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4-4-dv10A0A075B651 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4-4-dv10A0A075B651 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4-4-dv10A0A075B651 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4-4-dv10A0A075B651 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav4-4-dv10A0A075B651 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4-4-dv10A0A075B651 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4-4-dv10A0A075B651 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trav4-4-dv10A0A075B651 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4-4-dv10A0A075B651 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trav4-4-dv10A0A075B651 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4-4-dv10A0A075B651 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav4-4-dv10A0A075B651 Gm13168-201ENSMUST00000121771 632 ntBASIC12.46□□□□□ -0.41
Trav4-4-dv10A0A075B651 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4-4-dv10A0A075B651 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4-4-dv10A0A075B651 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4-4-dv10A0A075B651 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4-4-dv10A0A075B651 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4-4-dv10A0A075B651 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Trav4-4-dv10A0A075B651 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4-4-dv10A0A075B651 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4-4-dv10A0A075B651 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4-4-dv10A0A075B651 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Trav4-4-dv10A0A075B651 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4-4-dv10A0A075B651 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav4-4-dv10A0A075B651 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav4-4-dv10A0A075B651 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav4-4-dv10A0A075B651 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav4-4-dv10A0A075B651 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav4-4-dv10A0A075B651 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav4-4-dv10A0A075B651 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav4-4-dv10A0A075B651 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Trav4-4-dv10A0A075B651 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav4-4-dv10A0A075B651 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav4-4-dv10A0A075B651 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav4-4-dv10A0A075B651 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trav4-4-dv10A0A075B651 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-4-dv10A0A075B651 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-4-dv10A0A075B651 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-4-dv10A0A075B651 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav4-4-dv10A0A075B651 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-4-dv10A0A075B651 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-4-dv10A0A075B651 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-4-dv10A0A075B651 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-4-dv10A0A075B651 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-4-dv10A0A075B651 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-4-dv10A0A075B651 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-4-dv10A0A075B651 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-4-dv10A0A075B651 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav4-4-dv10A0A075B651 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
Trav4-4-dv10A0A075B651 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms