Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Gm3375-201ENSMUST00000203929 796 ntBASIC13.09□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Gm18421-201ENSMUST00000204122 625 ntBASIC13.09□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Odf3b-204ENSMUST00000227834 930 ntBASIC13.09□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.09□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trav15-2-dv6-2A0A075B650 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC13.08□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Gm11539-201ENSMUST00000119837 557 ntBASIC13.08□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.08□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.08□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.07□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC13.07□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC13.07□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.07□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 AC153881.1-201ENSMUST00000214448 284 ntBASIC13.07□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC13.07□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.07□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav15-2-dv6-2A0A075B650 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms