Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav13-2A0A075B649 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trav13-2A0A075B649 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trav13-2A0A075B649 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13-2A0A075B649 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC10.77□□□□□ -0.69
Trav13-2A0A075B649 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13-2A0A075B649 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13-2A0A075B649 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Trav13-2A0A075B649 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13-2A0A075B649 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Trav13-2A0A075B649 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC10.77□□□□□ -0.69
Trav13-2A0A075B649 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13-2A0A075B649 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13-2A0A075B649 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13-2A0A075B649 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13-2A0A075B649 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Trav13-2A0A075B649 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13-2A0A075B649 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Trav13-2A0A075B649 AC120002.2-201ENSMUST00000220205 773 ntBASIC10.77□□□□□ -0.69
Trav13-2A0A075B649 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC10.77□□□□□ -0.69
Trav13-2A0A075B649 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13-2A0A075B649 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13-2A0A075B649 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13-2A0A075B649 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13-2A0A075B649 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13-2A0A075B649 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13-2A0A075B649 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13-2A0A075B649 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC10.77□□□□□ -0.69
Trav13-2A0A075B649 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Trav13-2A0A075B649 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13-2A0A075B649 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13-2A0A075B649 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13-2A0A075B649 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13-2A0A075B649 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
Trav13-2A0A075B649 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13-2A0A075B649 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC10.77□□□□□ -0.69
Trav13-2A0A075B649 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13-2A0A075B649 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13-2A0A075B649 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13-2A0A075B649 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Trav13-2A0A075B649 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Gfra2-202ENSMUST00000227633 1480 ntBASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Gm15378-201ENSMUST00000121894 207 ntBASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Gm37856-201ENSMUST00000191634 999 ntBASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Trav13-2A0A075B649 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav13-2A0A075B649 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms