Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-3A0A075B648 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-3A0A075B648 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav12-3A0A075B648 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav12-3A0A075B648 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Trav12-3A0A075B648 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12-3A0A075B648 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav12-3A0A075B648 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Trav12-3A0A075B648 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC11.69□□□□□ -0.54
Trav12-3A0A075B648 Gm10655-201ENSMUST00000098658 1397 ntBASIC11.69□□□□□ -0.54
Trav12-3A0A075B648 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12-3A0A075B648 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12-3A0A075B648 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12-3A0A075B648 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12-3A0A075B648 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12-3A0A075B648 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Trav12-3A0A075B648 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12-3A0A075B648 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC11.69□□□□□ -0.54
Trav12-3A0A075B648 Wdr70-203ENSMUST00000227371 1130 ntBASIC11.69□□□□□ -0.54
Trav12-3A0A075B648 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Trav12-3A0A075B648 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12-3A0A075B648 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav12-3A0A075B648 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12-3A0A075B648 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav12-3A0A075B648 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
Trav12-3A0A075B648 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12-3A0A075B648 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.69□□□□□ -0.54
Trav12-3A0A075B648 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12-3A0A075B648 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12-3A0A075B648 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12-3A0A075B648 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12-3A0A075B648 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12-3A0A075B648 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC11.69□□□□□ -0.54
Trav12-3A0A075B648 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav12-3A0A075B648 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC11.69□□□□□ -0.54
Trav12-3A0A075B648 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Trav12-3A0A075B648 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-3A0A075B648 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav12-3A0A075B648 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-3A0A075B648 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-3A0A075B648 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-3A0A075B648 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-3A0A075B648 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-3A0A075B648 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-3A0A075B648 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-3A0A075B648 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-3A0A075B648 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-3A0A075B648 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-3A0A075B648 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-3A0A075B648 Gm38042-201ENSMUST00000191614 5208 ntBASIC11.68□□□□□ -0.54
Trav12-3A0A075B648 Gm45203-201ENSMUST00000206384 1831 ntBASIC11.68□□□□□ -0.54
Trav12-3A0A075B648 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-3A0A075B648 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-3A0A075B648 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Trav12-3A0A075B648 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Trav12-3A0A075B648 Gm43173-201ENSMUST00000202246 593 ntBASIC11.68□□□□□ -0.54
Trav12-3A0A075B648 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav12-3A0A075B648 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-3A0A075B648 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-3A0A075B648 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-3A0A075B648 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-3A0A075B648 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-3A0A075B648 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav12-3A0A075B648 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-3A0A075B648 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-3A0A075B648 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-3A0A075B648 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-3A0A075B648 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC11.68□□□□□ -0.54
Trav12-3A0A075B648 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-3A0A075B648 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Trav12-3A0A075B648 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-3A0A075B648 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav12-3A0A075B648 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Trav12-3A0A075B648 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-3A0A075B648 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav12-3A0A075B648 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-3A0A075B648 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-3A0A075B648 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-3A0A075B648 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-3A0A075B648 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-3A0A075B648 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-3A0A075B648 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-3A0A075B648 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-3A0A075B648 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-3A0A075B648 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC11.67□□□□□ -0.54
Trav12-3A0A075B648 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Trav12-3A0A075B648 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Trav12-3A0A075B648 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-3A0A075B648 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-3A0A075B648 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-3A0A075B648 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-3A0A075B648 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-3A0A075B648 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-3A0A075B648 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-3A0A075B648 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-3A0A075B648 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Trav12-3A0A075B648 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-3A0A075B648 Gm10605-202ENSMUST00000183019 3198 ntBASIC11.67□□□□□ -0.54
Trav12-3A0A075B648 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav12-3A0A075B648 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms