Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.62□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.62□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC13.61□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Gm43353-201ENSMUST00000199224 1295 ntBASIC13.61□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.61□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.6□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.6□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.59□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC13.59□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Gm715-201ENSMUST00000117865 831 ntBASIC13.59□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Gm13168-201ENSMUST00000121771 632 ntBASIC13.59□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav15d-1-dv6d-1A0A075B624 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms