Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Gm36967-201ENSMUST00000193814 266 ntBASIC12.42□□□□□ -0.42
Trav6n-5A0A075B621 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-5A0A075B621 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Trav6n-5A0A075B621 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-5A0A075B621 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-5A0A075B621 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav6n-5A0A075B621 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-5A0A075B621 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-5A0A075B621 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-5A0A075B621 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-5A0A075B621 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav6n-5A0A075B621 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-5A0A075B621 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav6n-5A0A075B621 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav6n-5A0A075B621 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-5A0A075B621 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav6n-5A0A075B621 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Trav6n-5A0A075B621 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-5A0A075B621 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-5A0A075B621 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-5A0A075B621 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-5A0A075B621 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav6n-5A0A075B621 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-5A0A075B621 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-5A0A075B621 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-5A0A075B621 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-5A0A075B621 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-5A0A075B621 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-5A0A075B621 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-5A0A075B621 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav6n-5A0A075B621 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav6n-5A0A075B621 Gm11249-201ENSMUST00000117071 859 ntBASIC12.41□□□□□ -0.42
Trav6n-5A0A075B621 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-5A0A075B621 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-5A0A075B621 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-5A0A075B621 Gm44672-201ENSMUST00000206944 1098 ntBASIC12.41□□□□□ -0.42
Trav6n-5A0A075B621 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.41□□□□□ -0.42
Trav6n-5A0A075B621 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-5A0A075B621 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-5A0A075B621 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-5A0A075B621 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav6n-5A0A075B621 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-5A0A075B621 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-5A0A075B621 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav6n-5A0A075B621 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav6n-5A0A075B621 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-5A0A075B621 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-5A0A075B621 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-5A0A075B621 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-5A0A075B621 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-5A0A075B621 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-5A0A075B621 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-5A0A075B621 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6n-5A0A075B621 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav6n-5A0A075B621 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6n-5A0A075B621 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6n-5A0A075B621 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6n-5A0A075B621 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6n-5A0A075B621 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6n-5A0A075B621 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6n-5A0A075B621 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav6n-5A0A075B621 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6n-5A0A075B621 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6n-5A0A075B621 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav6n-5A0A075B621 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6n-5A0A075B621 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav6n-5A0A075B621 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6n-5A0A075B621 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Trav6n-5A0A075B621 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6n-5A0A075B621 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav6n-5A0A075B621 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6n-5A0A075B621 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6n-5A0A075B621 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav6n-5A0A075B621 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav6n-5A0A075B621 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.4□□□□□ -0.42
Trav6n-5A0A075B621 Mir5133-201ENSMUST00000174955 77 ntBASIC12.4□□□□□ -0.42
Trav6n-5A0A075B621 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6n-5A0A075B621 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6n-5A0A075B621 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6n-5A0A075B621 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6n-5A0A075B621 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6n-5A0A075B621 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6n-5A0A075B621 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6n-5A0A075B621 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Trav6n-5A0A075B621 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trav6n-5A0A075B621 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav6n-5A0A075B621 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trav6n-5A0A075B621 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-5A0A075B621 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-5A0A075B621 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav6n-5A0A075B621 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-5A0A075B621 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-5A0A075B621 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-5A0A075B621 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-5A0A075B621 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-5A0A075B621 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-5A0A075B621 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-5A0A075B621 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-5A0A075B621 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Trav6n-5A0A075B621 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms