Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7n-4A0A075B620 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC12.15□□□□□ -0.46
Trav7n-4A0A075B620 Alkbh1-212ENSMUST00000185301 408 ntBASIC12.15□□□□□ -0.46
Trav7n-4A0A075B620 Gm5297-201ENSMUST00000198555 1171 ntBASIC12.15□□□□□ -0.46
Trav7n-4A0A075B620 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7n-4A0A075B620 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7n-4A0A075B620 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7n-4A0A075B620 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.15□□□□□ -0.46
Trav7n-4A0A075B620 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7n-4A0A075B620 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7n-4A0A075B620 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.15□□□□□ -0.46
Trav7n-4A0A075B620 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav7n-4A0A075B620 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.15□□□□□ -0.46
Trav7n-4A0A075B620 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav7n-4A0A075B620 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav7n-4A0A075B620 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav7n-4A0A075B620 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Trav7n-4A0A075B620 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Trav7n-4A0A075B620 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav7n-4A0A075B620 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav7n-4A0A075B620 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7n-4A0A075B620 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7n-4A0A075B620 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7n-4A0A075B620 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav7n-4A0A075B620 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7n-4A0A075B620 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7n-4A0A075B620 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7n-4A0A075B620 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7n-4A0A075B620 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7n-4A0A075B620 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7n-4A0A075B620 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7n-4A0A075B620 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7n-4A0A075B620 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav7n-4A0A075B620 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7n-4A0A075B620 Gm14464-201ENSMUST00000119658 1254 ntBASIC12.14□□□□□ -0.47
Trav7n-4A0A075B620 Gm4968-201ENSMUST00000071458 858 ntBASIC12.14□□□□□ -0.47
Trav7n-4A0A075B620 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7n-4A0A075B620 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7n-4A0A075B620 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7n-4A0A075B620 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7n-4A0A075B620 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7n-4A0A075B620 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7n-4A0A075B620 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav7n-4A0A075B620 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.14□□□□□ -0.47
Trav7n-4A0A075B620 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav7n-4A0A075B620 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7n-4A0A075B620 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7n-4A0A075B620 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7n-4A0A075B620 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7n-4A0A075B620 Phf7-203ENSMUST00000226565 1971 ntBASIC12.13□□□□□ -0.47
Trav7n-4A0A075B620 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7n-4A0A075B620 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7n-4A0A075B620 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav7n-4A0A075B620 Gm9694-201ENSMUST00000193347 1189 ntBASIC12.13□□□□□ -0.47
Trav7n-4A0A075B620 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7n-4A0A075B620 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7n-4A0A075B620 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7n-4A0A075B620 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7n-4A0A075B620 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7n-4A0A075B620 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Trav7n-4A0A075B620 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7n-4A0A075B620 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.13□□□□□ -0.47
Trav7n-4A0A075B620 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav7n-4A0A075B620 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7n-4A0A075B620 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7n-4A0A075B620 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7n-4A0A075B620 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7n-4A0A075B620 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7n-4A0A075B620 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7n-4A0A075B620 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7n-4A0A075B620 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7n-4A0A075B620 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7n-4A0A075B620 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.12□□□□□ -0.47
Trav7n-4A0A075B620 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav7n-4A0A075B620 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7n-4A0A075B620 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7n-4A0A075B620 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7n-4A0A075B620 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC12.12□□□□□ -0.47
Trav7n-4A0A075B620 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC12.12□□□□□ -0.47
Trav7n-4A0A075B620 Gm42555-201ENSMUST00000199304 1039 ntBASIC12.12□□□□□ -0.47
Trav7n-4A0A075B620 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav7n-4A0A075B620 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav7n-4A0A075B620 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7n-4A0A075B620 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7n-4A0A075B620 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7n-4A0A075B620 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7n-4A0A075B620 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7n-4A0A075B620 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7n-4A0A075B620 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7n-4A0A075B620 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7n-4A0A075B620 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7n-4A0A075B620 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7n-4A0A075B620 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7n-4A0A075B620 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7n-4A0A075B620 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7n-4A0A075B620 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav7n-4A0A075B620 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav7n-4A0A075B620 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav7n-4A0A075B620 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav7n-4A0A075B620 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms