Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav13d-1A0A075B606 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-1A0A075B606 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-1A0A075B606 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-1A0A075B606 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-1A0A075B606 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-1A0A075B606 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-1A0A075B606 Gm8839-201ENSMUST00000121279 1645 ntBASIC11.74□□□□□ -0.53
Trav13d-1A0A075B606 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-1A0A075B606 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-1A0A075B606 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-1A0A075B606 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-1A0A075B606 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav13d-1A0A075B606 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav13d-1A0A075B606 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trav13d-1A0A075B606 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-1A0A075B606 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-1A0A075B606 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav13d-1A0A075B606 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav13d-1A0A075B606 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 AC069562.2-201ENSMUST00000224644 2146 ntBASIC11.72□□□□□ -0.53
Trav13d-1A0A075B606 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms