Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 MIR6509-201ENST00000614603 85 ntBASIC0.52□□□□□ -2.33
PCDHB1Q9Y5F3 uc_338.17-201ENST00000619633 179 ntBASIC0.52□□□□□ -2.33
PCDHB1Q9Y5F3 RNU6-681P-201ENST00000364012 104 ntBASIC0.51□□□□□ -2.33
PCDHB1Q9Y5F3 Y_RNA.681-201ENST00000516445 113 ntBASIC0.51□□□□□ -2.33
PCDHB1Q9Y5F3 RNA5SP147-201ENST00000516493 109 ntBASIC0.51□□□□□ -2.33
PCDHB1Q9Y5F3 MIR3675-201ENST00000583661 73 ntBASIC0.51□□□□□ -2.33
PCDHB1Q9Y5F3 Y_RNA.68-201ENST00000362881 102 ntBASIC0.5□□□□□ -2.33
PCDHB1Q9Y5F3 SNORD44.1-201ENST00000363202 61 ntBASIC0.5□□□□□ -2.33
PCDHB1Q9Y5F3 MIR582-201ENST00000365731 98 ntBASIC0.5□□□□□ -2.33
PCDHB1Q9Y5F3 RNU6-1015P-201ENST00000517121 99 ntBASIC0.5□□□□□ -2.33
PCDHB1Q9Y5F3 AC090625.1-201ENST00000357130 210 ntBASIC0.49□□□□□ -2.33
PCDHB1Q9Y5F3 Y_RNA.407-201ENST00000383986 113 ntBASIC0.49□□□□□ -2.33
PCDHB1Q9Y5F3 RNU6-1241P-201ENST00000384536 107 ntBASIC0.49□□□□□ -2.33
PCDHB1Q9Y5F3 Y_RNA.545-201ENST00000384652 105 ntBASIC0.49□□□□□ -2.33
PCDHB1Q9Y5F3 MIR501-201ENST00000390204 84 ntBASIC0.49□□□□□ -2.33
PCDHB1Q9Y5F3 MIR760-201ENST00000390220 80 ntBASIC0.49□□□□□ -2.33
PCDHB1Q9Y5F3 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
PCDHB1Q9Y5F3 RNU6-604P-201ENST00000390917 100 ntBASIC0.49□□□□□ -2.33
PCDHB1Q9Y5F3 snoU13.13-201ENST00000458842 104 ntBASIC0.49□□□□□ -2.33
PCDHB1Q9Y5F3 RNU6-687P-201ENST00000516443 89 ntBASIC0.49□□□□□ -2.33
PCDHB1Q9Y5F3 MIR5706-201ENST00000579841 80 ntBASIC0.49□□□□□ -2.33
PCDHB1Q9Y5F3 MIR3657-201ENST00000584818 117 ntBASIC0.49□□□□□ -2.33
PCDHB1Q9Y5F3 AC243829.6-201ENST00000612652 106 ntBASIC0.49□□□□□ -2.33
PCDHB1Q9Y5F3 MIRLET7D-201ENST00000362263 87 ntBASIC0.48□□□□□ -2.33
PCDHB1Q9Y5F3 RNU6-1296P-201ENST00000383879 107 ntBASIC0.48□□□□□ -2.33
PCDHB1Q9Y5F3 SNORA2A-201ENST00000383885 135 ntBASIC0.48□□□□□ -2.33
PCDHB1Q9Y5F3 AL157398.1-201ENST00000452981 186 ntBASIC0.48□□□□□ -2.33
PCDHB1Q9Y5F3 RNU7-129P-201ENST00000516128 62 ntBASIC0.48□□□□□ -2.33
PCDHB1Q9Y5F3 MIR2909-201ENST00000617113 69 ntBASIC0.48□□□□□ -2.33
PCDHB1Q9Y5F3 MIR499B-201ENST00000636498 73 ntBASIC0.48□□□□□ -2.33
PCDHB1Q9Y5F3 SNORD45.1-201ENST00000363181 77 ntBASIC0.47□□□□□ -2.33
PCDHB1Q9Y5F3 Y_RNA.125-201ENST00000363371 111 ntBASIC0.47□□□□□ -2.33
PCDHB1Q9Y5F3 SNORD115-31-201ENST00000365318 82 ntBASIC0.47□□□□□ -2.33
PCDHB1Q9Y5F3 RNU6-260P-201ENST00000384092 107 ntBASIC0.47□□□□□ -2.33
PCDHB1Q9Y5F3 SNORD45A-201ENST00000384512 84 ntBASIC0.47□□□□□ -2.33
PCDHB1Q9Y5F3 AC114737.2-201ENST00000421583 173 ntBASIC0.47□□□□□ -2.33
PCDHB1Q9Y5F3 RNA5SP62-201ENST00000363457 110 ntBASIC0.46□□□□□ -2.34
PCDHB1Q9Y5F3 RNU6-411P-201ENST00000384451 107 ntBASIC0.46□□□□□ -2.34
PCDHB1Q9Y5F3 RNU6-587P-201ENST00000391282 106 ntBASIC0.46□□□□□ -2.34
PCDHB1Q9Y5F3 RNU6-752P-201ENST00000516376 102 ntBASIC0.46□□□□□ -2.34
PCDHB1Q9Y5F3 U7.6-201ENST00000610841 64 ntBASIC0.46□□□□□ -2.34
PCDHB1Q9Y5F3 SNORD115-22-201ENST00000364456 82 ntBASIC0.45□□□□□ -2.34
PCDHB1Q9Y5F3 VTRNA1-3-201ENST00000365645 89 ntBASIC0.45□□□□□ -2.34
PCDHB1Q9Y5F3 MIR548E-201ENST00000408287 88 ntBASIC0.45□□□□□ -2.34
PCDHB1Q9Y5F3 SCARNA17.3-201ENST00000516381 125 ntBASIC0.45□□□□□ -2.34
PCDHB1Q9Y5F3 MIR4677-201ENST00000584153 80 ntBASIC0.45□□□□□ -2.34
PCDHB1Q9Y5F3 MIR516B1-201ENST00000385211 90 ntBASIC0.44□□□□□ -2.34
PCDHB1Q9Y5F3 RNU6-982P-201ENST00000516216 102 ntBASIC0.44□□□□□ -2.34
PCDHB1Q9Y5F3 MIR4514-201ENST00000581410 57 ntBASIC0.44□□□□□ -2.34
PCDHB1Q9Y5F3 Y_RNA.433-201ENST00000384089 102 ntBASIC0.43□□□□□ -2.34
PCDHB1Q9Y5F3 MIR154-201ENST00000385243 84 ntBASIC0.43□□□□□ -2.34
PCDHB1Q9Y5F3 uc_338.10-201ENST00000621872 182 ntBASIC0.43□□□□□ -2.34
PCDHB1Q9Y5F3 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.43□□□□□ -2.34
PCDHB1Q9Y5F3 RNA5SP128-201ENST00000365305 116 ntBASIC0.42□□□□□ -2.34
PCDHB1Q9Y5F3 RNU6-815P-201ENST00000384080 113 ntBASIC0.42□□□□□ -2.34
PCDHB1Q9Y5F3 RNU7-188P-201ENST00000517063 64 ntBASIC0.42□□□□□ -2.34
PCDHB1Q9Y5F3 MIR3925-201ENST00000584674 77 ntBASIC0.42□□□□□ -2.34
PCDHB1Q9Y5F3 RNU6-1327P-201ENST00000365302 105 ntBASIC0.41□□□□□ -2.34
PCDHB1Q9Y5F3 SNORA2.1-201ENST00000363089 137 ntBASIC0.4□□□□□ -2.35
PCDHB1Q9Y5F3 SNORD114-4-201ENST00000363962 75 ntBASIC0.4□□□□□ -2.35
PCDHB1Q9Y5F3 RNU6-634P-201ENST00000459134 106 ntBASIC0.4□□□□□ -2.35
PCDHB1Q9Y5F3 AC021146.9-201ENST00000512503 156 ntBASIC0.4□□□□□ -2.35
PCDHB1Q9Y5F3 SNORA62.5-201ENST00000516634 120 ntBASIC0.4□□□□□ -2.35
PCDHB1Q9Y5F3 MIR548AD-201ENST00000584780 82 ntBASIC0.4□□□□□ -2.35
PCDHB1Q9Y5F3 SNORD113.1-201ENST00000363280 73 ntBASIC0.39□□□□□ -2.35
PCDHB1Q9Y5F3 RNU6-540P-201ENST00000384622 101 ntBASIC0.39□□□□□ -2.35
PCDHB1Q9Y5F3 AC073261.1-201ENST00000429409 121 ntBASIC0.39□□□□□ -2.35
PCDHB1Q9Y5F3 RNU6-881P-201ENST00000516813 102 ntBASIC0.39□□□□□ -2.35
PCDHB1Q9Y5F3 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.39□□□□□ -2.35
PCDHB1Q9Y5F3 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
PCDHB1Q9Y5F3 SNORA50A-201ENST00000384225 134 ntBASIC0.38□□□□□ -2.35
PCDHB1Q9Y5F3 RNU6-127P-201ENST00000390897 107 ntBASIC0.38□□□□□ -2.35
PCDHB1Q9Y5F3 RNU6-175P-201ENST00000516896 107 ntBASIC0.38□□□□□ -2.35
PCDHB1Q9Y5F3 RN7SL660P-201ENST00000614852 299 ntBASIC0.38□□□□□ -2.35
PCDHB1Q9Y5F3 SNORA9.1-201ENST00000362412 131 ntBASIC0.37□□□□□ -2.35
PCDHB1Q9Y5F3 MIR643-201ENST00000385267 97 ntBASIC0.37□□□□□ -2.35
PCDHB1Q9Y5F3 AC084368.1-201ENST00000620935 65 ntBASIC0.37□□□□□ -2.35
PCDHB1Q9Y5F3 RNU6-645P-201ENST00000364649 106 ntBASIC0.36□□□□□ -2.35
PCDHB1Q9Y5F3 SNORA63.6-201ENST00000364921 119 ntBASIC0.36□□□□□ -2.35
PCDHB1Q9Y5F3 SNORA49-201ENST00000386157 136 ntBASIC0.36□□□□□ -2.35
PCDHB1Q9Y5F3 SNORA33.1-201ENST00000364957 130 ntBASIC0.35□□□□□ -2.35
PCDHB1Q9Y5F3 SNORD116-24-201ENST00000384549 92 ntBASIC0.35□□□□□ -2.35
PCDHB1Q9Y5F3 Y_RNA.633-201ENST00000459107 95 ntBASIC0.35□□□□□ -2.35
PCDHB1Q9Y5F3 RNU6-656P-201ENST00000516785 107 ntBASIC0.35□□□□□ -2.35
PCDHB1Q9Y5F3 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.35□□□□□ -2.35
PCDHB1Q9Y5F3 MIR20A-201ENST00000362279 71 ntBASIC0.34□□□□□ -2.36
PCDHB1Q9Y5F3 RNA5SP134-201ENST00000516492 96 ntBASIC0.34□□□□□ -2.36
PCDHB1Q9Y5F3 SCARNA11.2-201ENST00000517183 154 ntBASIC0.34□□□□□ -2.36
PCDHB1Q9Y5F3 AC023932.2-201ENST00000603176 175 ntBASIC0.34□□□□□ -2.36
PCDHB1Q9Y5F3 MIR8053-201ENST00000613344 75 ntBASIC0.34□□□□□ -2.36
PCDHB1Q9Y5F3 AC090617.8-201ENST00000623339 167 ntBASIC0.34□□□□□ -2.36
PCDHB1Q9Y5F3 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.34□□□□□ -2.36
PCDHB1Q9Y5F3 RNU6-1036P-201ENST00000383959 104 ntBASIC0.33□□□□□ -2.36
PCDHB1Q9Y5F3 RNU6-895P-201ENST00000384125 103 ntBASIC0.33□□□□□ -2.36
PCDHB1Q9Y5F3 RNA5SP63-201ENST00000391225 112 ntBASIC0.33□□□□□ -2.36
PCDHB1Q9Y5F3 AC244090.1-201ENST00000441884 93 ntBASIC0.33□□□□□ -2.36
PCDHB1Q9Y5F3 AC108740.1-201ENST00000498629 225 ntBASIC0.33□□□□□ -2.36
PCDHB1Q9Y5F3 AC069113.3-201ENST00000521019 150 ntBASIC0.33□□□□□ -2.36
PCDHB1Q9Y5F3 MIR6739-201ENST00000622461 75 ntBASIC0.33□□□□□ -2.36
PCDHB1Q9Y5F3 SNORD114-29-201ENST00000364819 70 ntBASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 193.7 ms