Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 SNORA15B-1-201ENST00000384334 135 ntBASIC1.62□□□□□ -2.15
COL17A1Q9UMD9 RNU7-74P-201ENST00000459104 62 ntBASIC1.62□□□□□ -2.15
COL17A1Q9UMD9 RNU6-910P-201ENST00000390844 107 ntBASIC1.61□□□□□ -2.15
COL17A1Q9UMD9 SNORA75.2-201ENST00000391138 150 ntBASIC1.61□□□□□ -2.15
COL17A1Q9UMD9 SNORA75.3-201ENST00000391231 150 ntBASIC1.61□□□□□ -2.15
COL17A1Q9UMD9 RNU7-56P-201ENST00000458744 62 ntBASIC1.61□□□□□ -2.15
COL17A1Q9UMD9 AC023827.1-201ENST00000569247 97 ntBASIC1.61□□□□□ -2.15
COL17A1Q9UMD9 MIR4804-201ENST00000581683 73 ntBASIC1.61□□□□□ -2.15
COL17A1Q9UMD9 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
COL17A1Q9UMD9 RNU6-924P-201ENST00000362926 108 ntBASIC1.6□□□□□ -2.15
COL17A1Q9UMD9 SNORD114-4-201ENST00000363962 75 ntBASIC1.6□□□□□ -2.15
COL17A1Q9UMD9 MIR532-201ENST00000385025 91 ntBASIC1.6□□□□□ -2.15
COL17A1Q9UMD9 RNU7-21P-201ENST00000459430 62 ntBASIC1.6□□□□□ -2.15
COL17A1Q9UMD9 RNU6-419P-201ENST00000517030 63 ntBASIC1.6□□□□□ -2.15
COL17A1Q9UMD9 SNORA70.22-201ENST00000517160 124 ntBASIC1.6□□□□□ -2.15
COL17A1Q9UMD9 AL136317.1-201ENST00000612653 226 ntBASIC1.6□□□□□ -2.15
COL17A1Q9UMD9 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.6□□□□□ -2.15
COL17A1Q9UMD9 Y_RNA.74-201ENST00000362911 99 ntBASIC1.59□□□□□ -2.15
COL17A1Q9UMD9 MIR1285-1-201ENST00000408593 84 ntBASIC1.59□□□□□ -2.15
COL17A1Q9UMD9 AC098934.3-201ENST00000430450 190 ntBASIC1.59□□□□□ -2.15
COL17A1Q9UMD9 Y_RNA.282-201ENST00000364793 102 ntBASIC1.58□□□□□ -2.16
COL17A1Q9UMD9 MIR527-201ENST00000385244 85 ntBASIC1.58□□□□□ -2.16
COL17A1Q9UMD9 RNU1-119P-201ENST00000391122 165 ntBASIC1.58□□□□□ -2.16
COL17A1Q9UMD9 RNU6-172P-201ENST00000411000 93 ntBASIC1.58□□□□□ -2.16
COL17A1Q9UMD9 CYP3A54P-201ENST00000566950 75 ntBASIC1.58□□□□□ -2.16
COL17A1Q9UMD9 Y_RNA.174-201ENST00000363781 105 ntBASIC1.57□□□□□ -2.16
COL17A1Q9UMD9 RNU1-141P-201ENST00000364623 158 ntBASIC1.57□□□□□ -2.16
COL17A1Q9UMD9 SNORD12-201ENST00000391002 90 ntBASIC1.57□□□□□ -2.16
COL17A1Q9UMD9 SNORD114-21-201ENST00000606412 72 ntBASIC1.57□□□□□ -2.16
COL17A1Q9UMD9 U6.103-201ENST00000637085 61 ntBASIC1.57□□□□□ -2.16
COL17A1Q9UMD9 RNU4-38P-201ENST00000364472 129 ntBASIC1.56□□□□□ -2.16
COL17A1Q9UMD9 MIR6513-201ENST00000621188 64 ntBASIC1.56□□□□□ -2.16
COL17A1Q9UMD9 MIR924-201ENST00000638017 53 ntBASIC1.56□□□□□ -2.16
COL17A1Q9UMD9 MIR1-1-201ENST00000362147 71 ntBASIC1.56□□□□□ -2.16
COL17A1Q9UMD9 SNORD1B-201ENST00000363091 84 ntBASIC1.56□□□□□ -2.16
COL17A1Q9UMD9 SNORD28-201ENST00000384706 75 ntBASIC1.56□□□□□ -2.16
COL17A1Q9UMD9 MIR644A-201ENST00000385262 94 ntBASIC1.56□□□□□ -2.16
COL17A1Q9UMD9 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.56□□□□□ -2.16
COL17A1Q9UMD9 MIR936-201ENST00000401264 98 ntBASIC1.56□□□□□ -2.16
COL17A1Q9UMD9 SNORD79.1-201ENST00000516069 84 ntBASIC1.56□□□□□ -2.16
COL17A1Q9UMD9 MIR2909-201ENST00000617113 69 ntBASIC1.56□□□□□ -2.16
COL17A1Q9UMD9 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.55□□□□□ -2.16
COL17A1Q9UMD9 SNORD41.1-201ENST00000391000 69 ntBASIC1.55□□□□□ -2.16
COL17A1Q9UMD9 RNU6-518P-201ENST00000516056 96 ntBASIC1.55□□□□□ -2.16
COL17A1Q9UMD9 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
COL17A1Q9UMD9 MIR582-201ENST00000365731 98 ntBASIC1.54□□□□□ -2.16
COL17A1Q9UMD9 MIR100-201ENST00000385259 80 ntBASIC1.54□□□□□ -2.16
COL17A1Q9UMD9 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.54□□□□□ -2.16
COL17A1Q9UMD9 MIR548AG1-201ENST00000579932 66 ntBASIC1.54□□□□□ -2.16
COL17A1Q9UMD9 AC090617.8-201ENST00000623339 167 ntBASIC1.54□□□□□ -2.16
COL17A1Q9UMD9 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
COL17A1Q9UMD9 SNORA63.6-201ENST00000364921 119 ntBASIC1.53□□□□□ -2.16
COL17A1Q9UMD9 MIR520F-201ENST00000384824 87 ntBASIC1.53□□□□□ -2.16
COL17A1Q9UMD9 MIR548L-201ENST00000408303 86 ntBASIC1.53□□□□□ -2.16
COL17A1Q9UMD9 RNA5SP193-201ENST00000410353 107 ntBASIC1.53□□□□□ -2.16
COL17A1Q9UMD9 MIR548AL-201ENST00000578416 97 ntBASIC1.53□□□□□ -2.16
COL17A1Q9UMD9 AC244669.1-204ENST00000621564 178 ntBASIC1.53□□□□□ -2.16
COL17A1Q9UMD9 MIR330-201ENST00000362196 94 ntBASIC1.52□□□□□ -2.17
COL17A1Q9UMD9 Y_RNA.363-201ENST00000365529 113 ntBASIC1.52□□□□□ -2.17
COL17A1Q9UMD9 RNU6-246P-201ENST00000384702 107 ntBASIC1.52□□□□□ -2.17
COL17A1Q9UMD9 MIR652-201ENST00000385278 98 ntBASIC1.52□□□□□ -2.17
COL17A1Q9UMD9 AL021921.1-201ENST00000442774 93 ntBASIC1.52□□□□□ -2.17
COL17A1Q9UMD9 AC010487.4-201ENST00000637027 61 ntBASIC1.52□□□□□ -2.17
COL17A1Q9UMD9 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.51□□□□□ -2.17
COL17A1Q9UMD9 MIR519A2-201ENST00000384990 87 ntBASIC1.51□□□□□ -2.17
COL17A1Q9UMD9 MIR150-201ENST00000385048 84 ntBASIC1.51□□□□□ -2.17
COL17A1Q9UMD9 MIR579-201ENST00000385221 98 ntBASIC1.51□□□□□ -2.17
COL17A1Q9UMD9 RNU6-696P-201ENST00000390834 107 ntBASIC1.51□□□□□ -2.17
COL17A1Q9UMD9 MIR8087-201ENST00000612745 78 ntBASIC1.51□□□□□ -2.17
COL17A1Q9UMD9 MIR6857-201ENST00000613267 93 ntBASIC1.51□□□□□ -2.17
COL17A1Q9UMD9 Y_RNA.109-201ENST00000363215 102 ntBASIC1.5□□□□□ -2.17
COL17A1Q9UMD9 VTRNA1-3-201ENST00000365645 89 ntBASIC1.5□□□□□ -2.17
COL17A1Q9UMD9 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.5□□□□□ -2.17
COL17A1Q9UMD9 AC138207.3-201ENST00000585289 166 ntBASIC1.5□□□□□ -2.17
COL17A1Q9UMD9 U6.96-201ENST00000636425 70 ntBASIC1.5□□□□□ -2.17
COL17A1Q9UMD9 SNORD114-23-201ENST00000363536 72 ntBASIC1.5□□□□□ -2.17
COL17A1Q9UMD9 RNU6-726P-201ENST00000364680 107 ntBASIC1.5□□□□□ -2.17
COL17A1Q9UMD9 RNU6-716P-201ENST00000365621 103 ntBASIC1.5□□□□□ -2.17
COL17A1Q9UMD9 RNA5SP484-201ENST00000458857 111 ntBASIC1.5□□□□□ -2.17
COL17A1Q9UMD9 SCARNA17.3-201ENST00000516381 125 ntBASIC1.5□□□□□ -2.17
COL17A1Q9UMD9 MIR4698-201ENST00000577795 80 ntBASIC1.5□□□□□ -2.17
COL17A1Q9UMD9 MIR548E-201ENST00000408287 88 ntBASIC1.49□□□□□ -2.17
COL17A1Q9UMD9 MIR1255B2-201ENST00000408618 67 ntBASIC1.49□□□□□ -2.17
COL17A1Q9UMD9 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.49□□□□□ -2.17
COL17A1Q9UMD9 RNU6-1008P-201ENST00000384160 104 ntBASIC1.48□□□□□ -2.17
COL17A1Q9UMD9 SNORA25-201ENST00000384384 134 ntBASIC1.47□□□□□ -2.17
COL17A1Q9UMD9 RNA5SP94-201ENST00000516917 108 ntBASIC1.47□□□□□ -2.17
COL17A1Q9UMD9 MIR548AE1-201ENST00000583292 70 ntBASIC1.47□□□□□ -2.17
COL17A1Q9UMD9 MIR4639-201ENST00000584938 69 ntBASIC1.47□□□□□ -2.17
COL17A1Q9UMD9 RNU6-822P-201ENST00000362707 106 ntBASIC1.46□□□□□ -2.18
COL17A1Q9UMD9 MIR516B1-201ENST00000385211 90 ntBASIC1.46□□□□□ -2.18
COL17A1Q9UMD9 AC002350.1-201ENST00000490759 375 ntBASIC1.46□□□□□ -2.18
COL17A1Q9UMD9 FABP5P4-201ENST00000437203 171 ntBASIC1.45□□□□□ -2.18
COL17A1Q9UMD9 RNU6-1206P-201ENST00000516339 103 ntBASIC1.45□□□□□ -2.18
COL17A1Q9UMD9 Y_RNA.407-201ENST00000383986 113 ntBASIC1.44□□□□□ -2.18
COL17A1Q9UMD9 SNORA8.2-201ENST00000384372 139 ntBASIC1.44□□□□□ -2.18
COL17A1Q9UMD9 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
COL17A1Q9UMD9 RNU6-894P-201ENST00000517094 105 ntBASIC1.44□□□□□ -2.18
COL17A1Q9UMD9 Y_RNA.69-201ENST00000362885 109 ntBASIC1.43□□□□□ -2.18
COL17A1Q9UMD9 RNU6-1204P-201ENST00000363948 107 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 8.3 ms