Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 RNU6-1275P-201ENST00000391087 107 ntBASIC0.41□□□□□ -2.34
DKK3Q9UBP4 SNORD42B-201ENST00000458893 67 ntBASIC0.41□□□□□ -2.34
DKK3Q9UBP4 MIR5589-201ENST00000579442 60 ntBASIC0.41□□□□□ -2.34
DKK3Q9UBP4 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
DKK3Q9UBP4 uc_338.10-201ENST00000621872 182 ntBASIC0.41□□□□□ -2.34
DKK3Q9UBP4 MIR103A1-201ENST00000362165 78 ntBASIC0.4□□□□□ -2.35
DKK3Q9UBP4 MIR760-201ENST00000390220 80 ntBASIC0.4□□□□□ -2.35
DKK3Q9UBP4 RNU6-274P-201ENST00000459566 107 ntBASIC0.4□□□□□ -2.35
DKK3Q9UBP4 RNU6-1232P-201ENST00000516299 86 ntBASIC0.4□□□□□ -2.35
DKK3Q9UBP4 RNU6-807P-201ENST00000516805 107 ntBASIC0.4□□□□□ -2.35
DKK3Q9UBP4 MIR548AD-201ENST00000584780 82 ntBASIC0.4□□□□□ -2.35
DKK3Q9UBP4 MIR4773-1-201ENST00000637203 78 ntBASIC0.4□□□□□ -2.35
DKK3Q9UBP4 RNU6-24P-201ENST00000384440 107 ntBASIC0.39□□□□□ -2.35
DKK3Q9UBP4 SNORA9.1-201ENST00000362412 131 ntBASIC0.38□□□□□ -2.35
DKK3Q9UBP4 Y_RNA.532-201ENST00000384590 113 ntBASIC0.38□□□□□ -2.35
DKK3Q9UBP4 MIR501-201ENST00000390204 84 ntBASIC0.38□□□□□ -2.35
DKK3Q9UBP4 RNA5SP299-201ENST00000391203 116 ntBASIC0.38□□□□□ -2.35
DKK3Q9UBP4 MIR548AE1-201ENST00000583292 70 ntBASIC0.38□□□□□ -2.35
DKK3Q9UBP4 MIR4473-201ENST00000583731 91 ntBASIC0.38□□□□□ -2.35
DKK3Q9UBP4 RNU6-1327P-201ENST00000365302 105 ntBASIC0.37□□□□□ -2.35
DKK3Q9UBP4 RNU6-1039P-201ENST00000383931 107 ntBASIC0.37□□□□□ -2.35
DKK3Q9UBP4 MIR652-201ENST00000385278 98 ntBASIC0.37□□□□□ -2.35
DKK3Q9UBP4 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.37□□□□□ -2.35
DKK3Q9UBP4 RNU6-857P-201ENST00000515893 110 ntBASIC0.37□□□□□ -2.35
DKK3Q9UBP4 SCARNA17.3-201ENST00000516381 125 ntBASIC0.37□□□□□ -2.35
DKK3Q9UBP4 MIR4677-201ENST00000584153 80 ntBASIC0.37□□□□□ -2.35
DKK3Q9UBP4 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.37□□□□□ -2.35
DKK3Q9UBP4 RNU6-154P-201ENST00000384306 106 ntBASIC0.36□□□□□ -2.35
DKK3Q9UBP4 RNA5SP134-201ENST00000516492 96 ntBASIC0.36□□□□□ -2.35
DKK3Q9UBP4 RNU6-30P-201ENST00000384561 107 ntBASIC0.35□□□□□ -2.35
DKK3Q9UBP4 Z95118.1-201ENST00000421372 247 ntBASIC0.35□□□□□ -2.35
DKK3Q9UBP4 AL691482.2-201ENST00000457453 84 ntBASIC0.35□□□□□ -2.35
DKK3Q9UBP4 AC108740.1-201ENST00000498629 225 ntBASIC0.35□□□□□ -2.35
DKK3Q9UBP4 RNU6-815P-201ENST00000384080 113 ntBASIC0.34□□□□□ -2.36
DKK3Q9UBP4 RNA5SP225-201ENST00000410874 135 ntBASIC0.34□□□□□ -2.36
DKK3Q9UBP4 AC069113.3-201ENST00000521019 150 ntBASIC0.34□□□□□ -2.36
DKK3Q9UBP4 RNU6-260P-201ENST00000384092 107 ntBASIC0.33□□□□□ -2.36
DKK3Q9UBP4 AC073261.1-201ENST00000429409 121 ntBASIC0.33□□□□□ -2.36
DKK3Q9UBP4 MIR6509-201ENST00000614603 85 ntBASIC0.33□□□□□ -2.36
DKK3Q9UBP4 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.33□□□□□ -2.36
DKK3Q9UBP4 MIR20A-201ENST00000362279 71 ntBASIC0.32□□□□□ -2.36
DKK3Q9UBP4 RNA5SP98-201ENST00000363158 137 ntBASIC0.32□□□□□ -2.36
DKK3Q9UBP4 SNORD114-29-201ENST00000364819 70 ntBASIC0.32□□□□□ -2.36
DKK3Q9UBP4 MIR516B1-201ENST00000385211 90 ntBASIC0.32□□□□□ -2.36
DKK3Q9UBP4 AC244090.1-201ENST00000441884 93 ntBASIC0.32□□□□□ -2.36
DKK3Q9UBP4 RNU6-782P-201ENST00000516852 104 ntBASIC0.32□□□□□ -2.36
DKK3Q9UBP4 MIR3675-201ENST00000583661 73 ntBASIC0.32□□□□□ -2.36
DKK3Q9UBP4 MIR499B-201ENST00000636498 73 ntBASIC0.32□□□□□ -2.36
DKK3Q9UBP4 MIR876-201ENST00000401147 81 ntBASIC0.31□□□□□ -2.36
DKK3Q9UBP4 RNA5SP25-201ENST00000410815 110 ntBASIC0.31□□□□□ -2.36
DKK3Q9UBP4 MIR4802-201ENST00000581881 80 ntBASIC0.31□□□□□ -2.36
DKK3Q9UBP4 MIR3925-201ENST00000584674 77 ntBASIC0.31□□□□□ -2.36
DKK3Q9UBP4 AC084368.1-201ENST00000620935 65 ntBASIC0.31□□□□□ -2.36
DKK3Q9UBP4 MIR4315-1-201ENST00000636800 73 ntBASIC0.31□□□□□ -2.36
DKK3Q9UBP4 MIR4315-2-201ENST00000640925 73 ntBASIC0.31□□□□□ -2.36
DKK3Q9UBP4 RNU6-330P-201ENST00000363015 107 ntBASIC0.3□□□□□ -2.36
DKK3Q9UBP4 SCARNA18B-201ENST00000458806 135 ntBASIC0.3□□□□□ -2.36
DKK3Q9UBP4 MIR4484-201ENST00000582855 83 ntBASIC0.3□□□□□ -2.36
DKK3Q9UBP4 AC145423.2-201ENST00000610631 239 ntBASIC0.3□□□□□ -2.36
DKK3Q9UBP4 U7.4-201ENST00000614961 63 ntBASIC0.3□□□□□ -2.36
DKK3Q9UBP4 Y_RNA.185-201ENST00000363894 100 ntBASIC0.29□□□□□ -2.36
DKK3Q9UBP4 Y_RNA.250-201ENST00000364542 110 ntBASIC0.29□□□□□ -2.36
DKK3Q9UBP4 RNU6-127P-201ENST00000390897 107 ntBASIC0.29□□□□□ -2.36
DKK3Q9UBP4 RNU7-129P-201ENST00000516128 62 ntBASIC0.29□□□□□ -2.36
DKK3Q9UBP4 MIR3657-201ENST00000584818 117 ntBASIC0.29□□□□□ -2.36
DKK3Q9UBP4 SNORA2.1-201ENST00000363089 137 ntBASIC0.28□□□□□ -2.36
DKK3Q9UBP4 SNORA8.1-201ENST00000384250 140 ntBASIC0.28□□□□□ -2.36
DKK3Q9UBP4 SNORA75.1-201ENST00000391130 148 ntBASIC0.28□□□□□ -2.36
DKK3Q9UBP4 SNORD2-201ENST00000459163 69 ntBASIC0.28□□□□□ -2.36
DKK3Q9UBP4 SNORA40.17-201ENST00000517256 115 ntBASIC0.28□□□□□ -2.36
DKK3Q9UBP4 RNU6-990P-201ENST00000364385 104 ntBASIC0.27□□□□□ -2.37
DKK3Q9UBP4 RNU6-758P-201ENST00000516292 89 ntBASIC0.27□□□□□ -2.37
DKK3Q9UBP4 RNU6-638P-201ENST00000516582 104 ntBASIC0.27□□□□□ -2.37
DKK3Q9UBP4 RNU7-188P-201ENST00000517063 64 ntBASIC0.27□□□□□ -2.37
DKK3Q9UBP4 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.27□□□□□ -2.37
DKK3Q9UBP4 RNA5SP331-201ENST00000364986 107 ntBASIC0.26□□□□□ -2.37
DKK3Q9UBP4 MIR582-201ENST00000365731 98 ntBASIC0.26□□□□□ -2.37
DKK3Q9UBP4 MIR548E-201ENST00000408287 88 ntBASIC0.26□□□□□ -2.37
DKK3Q9UBP4 MIR5190-201ENST00000581537 80 ntBASIC0.26□□□□□ -2.37
DKK3Q9UBP4 MIR6718-201ENST00000616153 80 ntBASIC0.26□□□□□ -2.37
DKK3Q9UBP4 Y_RNA.244-201ENST00000364484 109 ntBASIC0.25□□□□□ -2.37
DKK3Q9UBP4 SNORD114-15-201ENST00000364687 72 ntBASIC0.25□□□□□ -2.37
DKK3Q9UBP4 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
DKK3Q9UBP4 RNU6-175P-201ENST00000516896 107 ntBASIC0.25□□□□□ -2.37
DKK3Q9UBP4 SCARNA11.2-201ENST00000517183 154 ntBASIC0.25□□□□□ -2.37
DKK3Q9UBP4 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
DKK3Q9UBP4 MIR4743-201ENST00000584576 69 ntBASIC0.25□□□□□ -2.37
DKK3Q9UBP4 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.25□□□□□ -2.37
DKK3Q9UBP4 MIR4662A-201ENST00000637499 67 ntBASIC0.25□□□□□ -2.37
DKK3Q9UBP4 SNORA42.1-201ENST00000363515 137 ntBASIC0.24□□□□□ -2.37
DKK3Q9UBP4 SNORA63.6-201ENST00000364921 119 ntBASIC0.24□□□□□ -2.37
DKK3Q9UBP4 MIR203A-201ENST00000384836 110 ntBASIC0.24□□□□□ -2.37
DKK3Q9UBP4 MIR892B-201ENST00000401279 77 ntBASIC0.24□□□□□ -2.37
DKK3Q9UBP4 Y_RNA.633-201ENST00000459107 95 ntBASIC0.24□□□□□ -2.37
DKK3Q9UBP4 Y_RNA.788-201ENST00000622394 112 ntBASIC0.24□□□□□ -2.37
DKK3Q9UBP4 RNA5SP368-201ENST00000364298 116 ntBASIC0.23□□□□□ -2.37
DKK3Q9UBP4 MIR106A-201ENST00000384870 81 ntBASIC0.23□□□□□ -2.37
DKK3Q9UBP4 RNU6-70P-201ENST00000516438 60 ntBASIC0.23□□□□□ -2.37
DKK3Q9UBP4 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.23□□□□□ -2.37
DKK3Q9UBP4 RNU6-411P-201ENST00000384451 107 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 254 ms