Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 RNU6-982P-201ENST00000516216 102 ntBASIC0.52□□□□□ -2.33
DNMT3BQ9UBC3 SNORD115-22-201ENST00000364456 82 ntBASIC0.51□□□□□ -2.33
DNMT3BQ9UBC3 AC114737.2-201ENST00000421583 173 ntBASIC0.51□□□□□ -2.33
DNMT3BQ9UBC3 HMGN2P22-201ENST00000427588 175 ntBASIC0.51□□□□□ -2.33
DNMT3BQ9UBC3 MIR8087-201ENST00000612745 78 ntBASIC0.51□□□□□ -2.33
DNMT3BQ9UBC3 MIR582-201ENST00000365731 98 ntBASIC0.5□□□□□ -2.33
DNMT3BQ9UBC3 RNU6-540P-201ENST00000384622 101 ntBASIC0.5□□□□□ -2.33
DNMT3BQ9UBC3 MIR652-201ENST00000385278 98 ntBASIC0.5□□□□□ -2.33
DNMT3BQ9UBC3 MIR3657-201ENST00000584818 117 ntBASIC0.5□□□□□ -2.33
DNMT3BQ9UBC3 AC243829.6-201ENST00000612652 106 ntBASIC0.5□□□□□ -2.33
DNMT3BQ9UBC3 MIR6755-201ENST00000619993 66 ntBASIC0.5□□□□□ -2.33
DNMT3BQ9UBC3 RNU7-24P-201ENST00000458867 62 ntBASIC0.49□□□□□ -2.33
DNMT3BQ9UBC3 RNU6-863P-201ENST00000515989 104 ntBASIC0.49□□□□□ -2.33
DNMT3BQ9UBC3 AC069503.3-201ENST00000618674 145 ntBASIC0.49□□□□□ -2.33
DNMT3BQ9UBC3 AL109933.3-201ENST00000619095 188 ntBASIC0.49□□□□□ -2.33
DNMT3BQ9UBC3 uc_338.17-201ENST00000619633 179 ntBASIC0.49□□□□□ -2.33
DNMT3BQ9UBC3 VTRNA1-3-201ENST00000365645 89 ntBASIC0.47□□□□□ -2.33
DNMT3BQ9UBC3 MIR216B-201ENST00000390186 82 ntBASIC0.47□□□□□ -2.33
DNMT3BQ9UBC3 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.47□□□□□ -2.33
DNMT3BQ9UBC3 RNU6-634P-201ENST00000459134 106 ntBASIC0.47□□□□□ -2.33
DNMT3BQ9UBC3 AC139453.2-201ENST00000487255 133 ntBASIC0.47□□□□□ -2.33
DNMT3BQ9UBC3 SNORA68.3-201ENST00000515906 83 ntBASIC0.47□□□□□ -2.33
DNMT3BQ9UBC3 AC073869.9-201ENST00000641610 120 ntBASIC0.47□□□□□ -2.33
DNMT3BQ9UBC3 MIR103A1-201ENST00000362165 78 ntBASIC0.46□□□□□ -2.34
DNMT3BQ9UBC3 SNORD113.1-201ENST00000363280 73 ntBASIC0.46□□□□□ -2.34
DNMT3BQ9UBC3 RNU6-260P-201ENST00000384092 107 ntBASIC0.46□□□□□ -2.34
DNMT3BQ9UBC3 AC073261.1-201ENST00000429409 121 ntBASIC0.46□□□□□ -2.34
DNMT3BQ9UBC3 MIRLET7D-201ENST00000362263 87 ntBASIC0.45□□□□□ -2.34
DNMT3BQ9UBC3 Y_RNA.407-201ENST00000383986 113 ntBASIC0.45□□□□□ -2.34
DNMT3BQ9UBC3 SNORD116-24-201ENST00000384549 92 ntBASIC0.45□□□□□ -2.34
DNMT3BQ9UBC3 SNORD30.1-201ENST00000391309 70 ntBASIC0.45□□□□□ -2.34
DNMT3BQ9UBC3 MIR1197-201ENST00000408818 88 ntBASIC0.45□□□□□ -2.34
DNMT3BQ9UBC3 AC114801.3-201ENST00000510231 177 ntBASIC0.45□□□□□ -2.34
DNMT3BQ9UBC3 RNU6-881P-201ENST00000516813 102 ntBASIC0.45□□□□□ -2.34
DNMT3BQ9UBC3 MIR499B-201ENST00000636498 73 ntBASIC0.45□□□□□ -2.34
DNMT3BQ9UBC3 SNORD44.1-201ENST00000363202 61 ntBASIC0.44□□□□□ -2.34
DNMT3BQ9UBC3 MIR501-201ENST00000390204 84 ntBASIC0.44□□□□□ -2.34
DNMT3BQ9UBC3 RNU6-663P-201ENST00000391105 106 ntBASIC0.44□□□□□ -2.34
DNMT3BQ9UBC3 MIR548E-201ENST00000408287 88 ntBASIC0.44□□□□□ -2.34
DNMT3BQ9UBC3 RNU7-129P-201ENST00000516128 62 ntBASIC0.44□□□□□ -2.34
DNMT3BQ9UBC3 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
DNMT3BQ9UBC3 MIR760-201ENST00000390220 80 ntBASIC0.43□□□□□ -2.34
DNMT3BQ9UBC3 RNU6-848P-201ENST00000515948 107 ntBASIC0.43□□□□□ -2.34
DNMT3BQ9UBC3 RNU6-617P-201ENST00000516147 107 ntBASIC0.43□□□□□ -2.34
DNMT3BQ9UBC3 RNU6-473P-201ENST00000516164 107 ntBASIC0.43□□□□□ -2.34
DNMT3BQ9UBC3 RNU6-752P-201ENST00000516376 102 ntBASIC0.43□□□□□ -2.34
DNMT3BQ9UBC3 SCARNA17.3-201ENST00000516381 125 ntBASIC0.43□□□□□ -2.34
DNMT3BQ9UBC3 RNU6-1049P-201ENST00000516414 107 ntBASIC0.43□□□□□ -2.34
DNMT3BQ9UBC3 SNORA2A-201ENST00000383885 135 ntBASIC0.42□□□□□ -2.34
DNMT3BQ9UBC3 RNU6-895P-201ENST00000384125 103 ntBASIC0.42□□□□□ -2.34
DNMT3BQ9UBC3 MIR516B1-201ENST00000385211 90 ntBASIC0.42□□□□□ -2.34
DNMT3BQ9UBC3 AC090625.1-201ENST00000357130 210 ntBASIC0.41□□□□□ -2.34
DNMT3BQ9UBC3 Y_RNA.125-201ENST00000363371 111 ntBASIC0.41□□□□□ -2.34
DNMT3BQ9UBC3 RNU6-645P-201ENST00000364649 106 ntBASIC0.41□□□□□ -2.34
DNMT3BQ9UBC3 SNORA50A-201ENST00000384225 134 ntBASIC0.41□□□□□ -2.34
DNMT3BQ9UBC3 RNU6-649P-201ENST00000384463 107 ntBASIC0.41□□□□□ -2.34
DNMT3BQ9UBC3 AC021146.9-201ENST00000512503 156 ntBASIC0.41□□□□□ -2.34
DNMT3BQ9UBC3 RNU6-656P-201ENST00000516785 107 ntBASIC0.41□□□□□ -2.34
DNMT3BQ9UBC3 RNU7-188P-201ENST00000517063 64 ntBASIC0.41□□□□□ -2.34
DNMT3BQ9UBC3 SNORA2.1-201ENST00000363089 137 ntBASIC0.4□□□□□ -2.35
DNMT3BQ9UBC3 Y_RNA.386-201ENST00000383913 105 ntBASIC0.4□□□□□ -2.35
DNMT3BQ9UBC3 RNU6-871P-201ENST00000516122 100 ntBASIC0.4□□□□□ -2.35
DNMT3BQ9UBC3 MIR5706-201ENST00000579841 80 ntBASIC0.4□□□□□ -2.35
DNMT3BQ9UBC3 MIR4677-201ENST00000584153 80 ntBASIC0.4□□□□□ -2.35
DNMT3BQ9UBC3 uc_338.10-201ENST00000621872 182 ntBASIC0.4□□□□□ -2.35
DNMT3BQ9UBC3 AC090617.8-201ENST00000623339 167 ntBASIC0.4□□□□□ -2.35
DNMT3BQ9UBC3 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.39□□□□□ -2.35
DNMT3BQ9UBC3 SNORA33.1-201ENST00000364957 130 ntBASIC0.39□□□□□ -2.35
DNMT3BQ9UBC3 U7.6-201ENST00000610841 64 ntBASIC0.39□□□□□ -2.35
DNMT3BQ9UBC3 MIR8053-201ENST00000613344 75 ntBASIC0.39□□□□□ -2.35
DNMT3BQ9UBC3 U6.111-201ENST00000636093 83 ntBASIC0.39□□□□□ -2.35
DNMT3BQ9UBC3 RNU6-1216P-201ENST00000362590 107 ntBASIC0.38□□□□□ -2.35
DNMT3BQ9UBC3 RNA5SP257-201ENST00000363023 116 ntBASIC0.38□□□□□ -2.35
DNMT3BQ9UBC3 RNU6-815P-201ENST00000384080 113 ntBASIC0.38□□□□□ -2.35
DNMT3BQ9UBC3 RNU6-630P-201ENST00000391258 106 ntBASIC0.38□□□□□ -2.35
DNMT3BQ9UBC3 MIR3925-201ENST00000584674 77 ntBASIC0.38□□□□□ -2.35
DNMT3BQ9UBC3 AC005520.4-201ENST00000604337 90 ntBASIC0.38□□□□□ -2.35
DNMT3BQ9UBC3 RN7SL660P-201ENST00000614852 299 ntBASIC0.38□□□□□ -2.35
DNMT3BQ9UBC3 SNORD114-4-201ENST00000363962 75 ntBASIC0.37□□□□□ -2.35
DNMT3BQ9UBC3 RNU6-1327P-201ENST00000365302 105 ntBASIC0.37□□□□□ -2.35
DNMT3BQ9UBC3 SNORA49-201ENST00000386157 136 ntBASIC0.37□□□□□ -2.35
DNMT3BQ9UBC3 RNU6-539P-201ENST00000516665 103 ntBASIC0.37□□□□□ -2.35
DNMT3BQ9UBC3 RNU6-175P-201ENST00000516896 107 ntBASIC0.37□□□□□ -2.35
DNMT3BQ9UBC3 MIR2909-201ENST00000617113 69 ntBASIC0.37□□□□□ -2.35
DNMT3BQ9UBC3 RNA5SP62-201ENST00000363457 110 ntBASIC0.36□□□□□ -2.35
DNMT3BQ9UBC3 SNORA63.6-201ENST00000364921 119 ntBASIC0.36□□□□□ -2.35
DNMT3BQ9UBC3 RNA5SP128-201ENST00000365305 116 ntBASIC0.36□□□□□ -2.35
DNMT3BQ9UBC3 Y_RNA.443-201ENST00000384135 111 ntBASIC0.36□□□□□ -2.35
DNMT3BQ9UBC3 RNU6-800P-201ENST00000384473 103 ntBASIC0.36□□□□□ -2.35
DNMT3BQ9UBC3 MIR548C-201ENST00000384815 97 ntBASIC0.36□□□□□ -2.35
DNMT3BQ9UBC3 MIR106A-201ENST00000384870 81 ntBASIC0.36□□□□□ -2.35
DNMT3BQ9UBC3 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
DNMT3BQ9UBC3 MIR4514-201ENST00000581410 57 ntBASIC0.36□□□□□ -2.35
DNMT3BQ9UBC3 MIR6739-201ENST00000622461 75 ntBASIC0.36□□□□□ -2.35
DNMT3BQ9UBC3 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.36□□□□□ -2.35
DNMT3BQ9UBC3 SNORA9.1-201ENST00000362412 131 ntBASIC0.35□□□□□ -2.35
DNMT3BQ9UBC3 MIR643-201ENST00000385267 97 ntBASIC0.35□□□□□ -2.35
DNMT3BQ9UBC3 Y_RNA.633-201ENST00000459107 95 ntBASIC0.35□□□□□ -2.35
DNMT3BQ9UBC3 MIR548AD-201ENST00000584780 82 ntBASIC0.35□□□□□ -2.35
DNMT3BQ9UBC3 RNU6-668P-201ENST00000364180 107 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 229.3 ms