Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 MIR3134-201ENST00000579433 74 ntBASIC0.43□□□□□ -2.34
NCKIPSDQ9NZQ3 MIR8087-201ENST00000612745 78 ntBASIC0.43□□□□□ -2.34
NCKIPSDQ9NZQ3 uc_338.10-201ENST00000621872 182 ntBASIC0.43□□□□□ -2.34
NCKIPSDQ9NZQ3 Y_RNA.788-201ENST00000622394 112 ntBASIC0.43□□□□□ -2.34
NCKIPSDQ9NZQ3 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.43□□□□□ -2.34
NCKIPSDQ9NZQ3 RNU6-330P-201ENST00000363015 107 ntBASIC0.42□□□□□ -2.34
NCKIPSDQ9NZQ3 Y_RNA.423-201ENST00000384057 113 ntBASIC0.42□□□□□ -2.34
NCKIPSDQ9NZQ3 RNU6-260P-201ENST00000384092 107 ntBASIC0.42□□□□□ -2.34
NCKIPSDQ9NZQ3 MIR6509-201ENST00000614603 85 ntBASIC0.42□□□□□ -2.34
NCKIPSDQ9NZQ3 Y_RNA.115-201ENST00000363272 98 ntBASIC0.41□□□□□ -2.34
NCKIPSDQ9NZQ3 Y_RNA.125-201ENST00000363371 111 ntBASIC0.41□□□□□ -2.34
NCKIPSDQ9NZQ3 MIR8053-201ENST00000613344 75 ntBASIC0.41□□□□□ -2.34
NCKIPSDQ9NZQ3 Y_RNA.250-201ENST00000364542 110 ntBASIC0.4□□□□□ -2.35
NCKIPSDQ9NZQ3 RNU6-587P-201ENST00000391282 106 ntBASIC0.4□□□□□ -2.35
NCKIPSDQ9NZQ3 MIR889-201ENST00000401280 79 ntBASIC0.4□□□□□ -2.35
NCKIPSDQ9NZQ3 HMGN2P22-201ENST00000427588 175 ntBASIC0.4□□□□□ -2.35
NCKIPSDQ9NZQ3 RNU6-871P-201ENST00000516122 100 ntBASIC0.4□□□□□ -2.35
NCKIPSDQ9NZQ3 SCARNA17.3-201ENST00000516381 125 ntBASIC0.4□□□□□ -2.35
NCKIPSDQ9NZQ3 RNA5SP330-201ENST00000517096 96 ntBASIC0.4□□□□□ -2.35
NCKIPSDQ9NZQ3 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
NCKIPSDQ9NZQ3 Y_RNA.30-201ENST00000362572 97 ntBASIC0.39□□□□□ -2.35
NCKIPSDQ9NZQ3 Y_RNA.433-201ENST00000384089 102 ntBASIC0.39□□□□□ -2.35
NCKIPSDQ9NZQ3 RNU6-687P-201ENST00000516443 89 ntBASIC0.39□□□□□ -2.35
NCKIPSDQ9NZQ3 MIR4473-201ENST00000583731 91 ntBASIC0.39□□□□□ -2.35
NCKIPSDQ9NZQ3 MIR3657-201ENST00000584818 117 ntBASIC0.39□□□□□ -2.35
NCKIPSDQ9NZQ3 RNA5SP257-201ENST00000363023 116 ntBASIC0.38□□□□□ -2.35
NCKIPSDQ9NZQ3 SNORA2.1-201ENST00000363089 137 ntBASIC0.38□□□□□ -2.35
NCKIPSDQ9NZQ3 SNORD45.1-201ENST00000363181 77 ntBASIC0.38□□□□□ -2.35
NCKIPSDQ9NZQ3 RNU6-1241P-201ENST00000384536 107 ntBASIC0.38□□□□□ -2.35
NCKIPSDQ9NZQ3 MIR154-201ENST00000385243 84 ntBASIC0.38□□□□□ -2.35
NCKIPSDQ9NZQ3 MIR652-201ENST00000385278 98 ntBASIC0.38□□□□□ -2.35
NCKIPSDQ9NZQ3 RNU6-523P-201ENST00000516304 54 ntBASIC0.38□□□□□ -2.35
NCKIPSDQ9NZQ3 Y_RNA.565-201ENST00000384719 101 ntBASIC0.37□□□□□ -2.35
NCKIPSDQ9NZQ3 MIR760-201ENST00000390220 80 ntBASIC0.37□□□□□ -2.35
NCKIPSDQ9NZQ3 SNORA62.5-201ENST00000516634 120 ntBASIC0.37□□□□□ -2.35
NCKIPSDQ9NZQ3 RNU6-1015P-201ENST00000517121 99 ntBASIC0.37□□□□□ -2.35
NCKIPSDQ9NZQ3 AL109933.3-201ENST00000619095 188 ntBASIC0.37□□□□□ -2.35
NCKIPSDQ9NZQ3 MIR664A-201ENST00000626086 82 ntBASIC0.37□□□□□ -2.35
NCKIPSDQ9NZQ3 MIR20A-201ENST00000362279 71 ntBASIC0.36□□□□□ -2.35
NCKIPSDQ9NZQ3 RNA5SP128-201ENST00000365305 116 ntBASIC0.36□□□□□ -2.35
NCKIPSDQ9NZQ3 MIR501-201ENST00000390204 84 ntBASIC0.36□□□□□ -2.35
NCKIPSDQ9NZQ3 AC073261.1-201ENST00000429409 121 ntBASIC0.36□□□□□ -2.35
NCKIPSDQ9NZQ3 RNU6-634P-201ENST00000459134 106 ntBASIC0.36□□□□□ -2.35
NCKIPSDQ9NZQ3 MIR548AE1-201ENST00000583292 70 ntBASIC0.36□□□□□ -2.35
NCKIPSDQ9NZQ3 MIR548AD-201ENST00000584780 82 ntBASIC0.36□□□□□ -2.35
NCKIPSDQ9NZQ3 AC090625.1-201ENST00000357130 210 ntBASIC0.35□□□□□ -2.35
NCKIPSDQ9NZQ3 RNA5SP62-201ENST00000363457 110 ntBASIC0.35□□□□□ -2.35
NCKIPSDQ9NZQ3 SNORD114-29-201ENST00000364819 70 ntBASIC0.35□□□□□ -2.35
NCKIPSDQ9NZQ3 MIR203A-201ENST00000384836 110 ntBASIC0.35□□□□□ -2.35
NCKIPSDQ9NZQ3 AC244090.1-201ENST00000441884 93 ntBASIC0.35□□□□□ -2.35
NCKIPSDQ9NZQ3 SNORD2-201ENST00000459163 69 ntBASIC0.35□□□□□ -2.35
NCKIPSDQ9NZQ3 MIR4677-201ENST00000584153 80 ntBASIC0.35□□□□□ -2.35
NCKIPSDQ9NZQ3 RNU6-815P-201ENST00000384080 113 ntBASIC0.34□□□□□ -2.36
NCKIPSDQ9NZQ3 MIR516B1-201ENST00000385211 90 ntBASIC0.34□□□□□ -2.36
NCKIPSDQ9NZQ3 SNORA9.1-201ENST00000362412 131 ntBASIC0.33□□□□□ -2.36
NCKIPSDQ9NZQ3 RNU6-990P-201ENST00000364385 104 ntBASIC0.33□□□□□ -2.36
NCKIPSDQ9NZQ3 SNORD115-22-201ENST00000364456 82 ntBASIC0.33□□□□□ -2.36
NCKIPSDQ9NZQ3 RNU6-604P-201ENST00000390917 100 ntBASIC0.33□□□□□ -2.36
NCKIPSDQ9NZQ3 AC108740.1-201ENST00000498629 225 ntBASIC0.33□□□□□ -2.36
NCKIPSDQ9NZQ3 MIR6739-201ENST00000622461 75 ntBASIC0.33□□□□□ -2.36
NCKIPSDQ9NZQ3 SNORA63.6-201ENST00000364921 119 ntBASIC0.32□□□□□ -2.36
NCKIPSDQ9NZQ3 RNU6-1327P-201ENST00000365302 105 ntBASIC0.32□□□□□ -2.36
NCKIPSDQ9NZQ3 SNORA15B-2-201ENST00000384058 135 ntBASIC0.32□□□□□ -2.36
NCKIPSDQ9NZQ3 RNU6-895P-201ENST00000384125 103 ntBASIC0.32□□□□□ -2.36
NCKIPSDQ9NZQ3 SNORA15B-1-201ENST00000384334 135 ntBASIC0.32□□□□□ -2.36
NCKIPSDQ9NZQ3 RNA5SP134-201ENST00000516492 96 ntBASIC0.32□□□□□ -2.36
NCKIPSDQ9NZQ3 SNORA40.17-201ENST00000517256 115 ntBASIC0.32□□□□□ -2.36
NCKIPSDQ9NZQ3 AC023932.2-201ENST00000603176 175 ntBASIC0.32□□□□□ -2.36
NCKIPSDQ9NZQ3 AC084368.1-201ENST00000620935 65 ntBASIC0.32□□□□□ -2.36
NCKIPSDQ9NZQ3 SNORD113.1-201ENST00000363280 73 ntBASIC0.31□□□□□ -2.36
NCKIPSDQ9NZQ3 RNU6-1162P-201ENST00000384443 104 ntBASIC0.31□□□□□ -2.36
NCKIPSDQ9NZQ3 MIR548E-201ENST00000408287 88 ntBASIC0.31□□□□□ -2.36
NCKIPSDQ9NZQ3 AC021146.9-201ENST00000512503 156 ntBASIC0.31□□□□□ -2.36
NCKIPSDQ9NZQ3 RNU7-129P-201ENST00000516128 62 ntBASIC0.31□□□□□ -2.36
NCKIPSDQ9NZQ3 RNU6-881P-201ENST00000516813 102 ntBASIC0.31□□□□□ -2.36
NCKIPSDQ9NZQ3 MIR499B-201ENST00000636498 73 ntBASIC0.31□□□□□ -2.36
NCKIPSDQ9NZQ3 SNORD115-31-201ENST00000365318 82 ntBASIC0.3□□□□□ -2.36
NCKIPSDQ9NZQ3 SNORD45A-201ENST00000384512 84 ntBASIC0.3□□□□□ -2.36
NCKIPSDQ9NZQ3 SNORA75.1-201ENST00000391130 148 ntBASIC0.3□□□□□ -2.36
NCKIPSDQ9NZQ3 MTND4LP1-201ENST00000446263 157 ntBASIC0.3□□□□□ -2.36
NCKIPSDQ9NZQ3 Y_RNA.633-201ENST00000459107 95 ntBASIC0.3□□□□□ -2.36
NCKIPSDQ9NZQ3 AC069113.3-201ENST00000521019 150 ntBASIC0.3□□□□□ -2.36
NCKIPSDQ9NZQ3 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.3□□□□□ -2.36
NCKIPSDQ9NZQ3 RNU6-1216P-201ENST00000362590 107 ntBASIC0.29□□□□□ -2.36
NCKIPSDQ9NZQ3 MIR582-201ENST00000365731 98 ntBASIC0.29□□□□□ -2.36
NCKIPSDQ9NZQ3 MIR521-2-201ENST00000384818 87 ntBASIC0.29□□□□□ -2.36
NCKIPSDQ9NZQ3 RNU6-127P-201ENST00000390897 107 ntBASIC0.29□□□□□ -2.36
NCKIPSDQ9NZQ3 MIR876-201ENST00000401147 81 ntBASIC0.29□□□□□ -2.36
NCKIPSDQ9NZQ3 RNA5SP147-201ENST00000516493 109 ntBASIC0.29□□□□□ -2.36
NCKIPSDQ9NZQ3 RNU7-188P-201ENST00000517063 64 ntBASIC0.29□□□□□ -2.36
NCKIPSDQ9NZQ3 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.29□□□□□ -2.36
NCKIPSDQ9NZQ3 RNU6-649P-201ENST00000384463 107 ntBASIC0.28□□□□□ -2.36
NCKIPSDQ9NZQ3 RNU6-540P-201ENST00000384622 101 ntBASIC0.28□□□□□ -2.36
NCKIPSDQ9NZQ3 MIR1197-201ENST00000408818 88 ntBASIC0.28□□□□□ -2.36
NCKIPSDQ9NZQ3 AC114801.3-201ENST00000510231 177 ntBASIC0.28□□□□□ -2.36
NCKIPSDQ9NZQ3 RNU6-539P-201ENST00000516665 103 ntBASIC0.28□□□□□ -2.36
NCKIPSDQ9NZQ3 RNU6-782P-201ENST00000516852 104 ntBASIC0.28□□□□□ -2.36
NCKIPSDQ9NZQ3 MIR4514-201ENST00000581410 57 ntBASIC0.28□□□□□ -2.36
NCKIPSDQ9NZQ3 MIR3925-201ENST00000584674 77 ntBASIC0.28□□□□□ -2.36
NCKIPSDQ9NZQ3 RNU6-645P-201ENST00000364649 106 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 183.6 ms