Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 Y_RNA.407-201ENST00000383986 113 ntBASIC0.8□□□□□ -2.28
PDLIM7Q9NR12 SNORA40.8-201ENST00000411034 126 ntBASIC0.8□□□□□ -2.28
PDLIM7Q9NR12 RNA5SP147-201ENST00000516493 109 ntBASIC0.8□□□□□ -2.28
PDLIM7Q9NR12 MIR6866-201ENST00000638146 69 ntBASIC0.8□□□□□ -2.28
PDLIM7Q9NR12 SNORD118-201ENST00000363593 134 ntBASIC0.79□□□□□ -2.28
PDLIM7Q9NR12 MIR652-201ENST00000385278 98 ntBASIC0.79□□□□□ -2.28
PDLIM7Q9NR12 RNU6-788P-201ENST00000390967 104 ntBASIC0.79□□□□□ -2.28
PDLIM7Q9NR12 RNU6-982P-201ENST00000516216 102 ntBASIC0.79□□□□□ -2.28
PDLIM7Q9NR12 SNORA40.17-201ENST00000517256 115 ntBASIC0.79□□□□□ -2.28
PDLIM7Q9NR12 RNU1-29P-201ENST00000606574 126 ntBASIC0.79□□□□□ -2.28
PDLIM7Q9NR12 RNA5SP347-201ENST00000362445 119 ntBASIC0.78□□□□□ -2.28
PDLIM7Q9NR12 SNORA2.1-201ENST00000363089 137 ntBASIC0.78□□□□□ -2.28
PDLIM7Q9NR12 Y_RNA.433-201ENST00000384089 102 ntBASIC0.78□□□□□ -2.28
PDLIM7Q9NR12 RNU4-54P-201ENST00000516428 129 ntBASIC0.78□□□□□ -2.28
PDLIM7Q9NR12 U6.111-201ENST00000636093 83 ntBASIC0.78□□□□□ -2.28
PDLIM7Q9NR12 RNU6-1216P-201ENST00000362590 107 ntBASIC0.77□□□□□ -2.29
PDLIM7Q9NR12 SNORD71-201ENST00000411292 86 ntBASIC0.77□□□□□ -2.29
PDLIM7Q9NR12 RNU6-590P-201ENST00000365039 107 ntBASIC0.76□□□□□ -2.29
PDLIM7Q9NR12 HMGN2P22-201ENST00000427588 175 ntBASIC0.76□□□□□ -2.29
PDLIM7Q9NR12 SCARNA17.3-201ENST00000516381 125 ntBASIC0.76□□□□□ -2.29
PDLIM7Q9NR12 AC243829.3-201ENST00000622177 108 ntBASIC0.76□□□□□ -2.29
PDLIM7Q9NR12 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
PDLIM7Q9NR12 Y_RNA.423-201ENST00000384057 113 ntBASIC0.75□□□□□ -2.29
PDLIM7Q9NR12 SNORD116-24-201ENST00000384549 92 ntBASIC0.75□□□□□ -2.29
PDLIM7Q9NR12 MIR518A1-201ENST00000385068 85 ntBASIC0.75□□□□□ -2.29
PDLIM7Q9NR12 RNU6-800P-201ENST00000384473 103 ntBASIC0.74□□□□□ -2.29
PDLIM7Q9NR12 MIR146A-201ENST00000385201 99 ntBASIC0.74□□□□□ -2.29
PDLIM7Q9NR12 snoU13.13-201ENST00000458842 104 ntBASIC0.74□□□□□ -2.29
PDLIM7Q9NR12 MIR5706-201ENST00000579841 80 ntBASIC0.74□□□□□ -2.29
PDLIM7Q9NR12 uc_338.10-201ENST00000621872 182 ntBASIC0.74□□□□□ -2.29
PDLIM7Q9NR12 RNA5SP62-201ENST00000363457 110 ntBASIC0.73□□□□□ -2.29
PDLIM7Q9NR12 RNU6-630P-201ENST00000391258 106 ntBASIC0.73□□□□□ -2.29
PDLIM7Q9NR12 MIR1197-201ENST00000408818 88 ntBASIC0.73□□□□□ -2.29
PDLIM7Q9NR12 AC098934.3-201ENST00000430450 190 ntBASIC0.73□□□□□ -2.29
PDLIM7Q9NR12 RNU6-229P-201ENST00000516614 102 ntBASIC0.73□□□□□ -2.29
PDLIM7Q9NR12 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.73□□□□□ -2.29
PDLIM7Q9NR12 RNA5SP499-201ENST00000363982 119 ntBASIC0.72□□□□□ -2.29
PDLIM7Q9NR12 RNU6-645P-201ENST00000364649 106 ntBASIC0.72□□□□□ -2.29
PDLIM7Q9NR12 SNORA2A-201ENST00000383885 135 ntBASIC0.72□□□□□ -2.29
PDLIM7Q9NR12 Y_RNA.386-201ENST00000383913 105 ntBASIC0.72□□□□□ -2.29
PDLIM7Q9NR12 RNU6-1232P-201ENST00000516299 86 ntBASIC0.72□□□□□ -2.29
PDLIM7Q9NR12 MIR582-201ENST00000365731 98 ntBASIC0.71□□□□□ -2.3
PDLIM7Q9NR12 Y_RNA.443-201ENST00000384135 111 ntBASIC0.71□□□□□ -2.3
PDLIM7Q9NR12 MTND4LP1-201ENST00000446263 157 ntBASIC0.71□□□□□ -2.3
PDLIM7Q9NR12 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.7□□□□□ -2.3
PDLIM7Q9NR12 Y_RNA.125-201ENST00000363371 111 ntBASIC0.7□□□□□ -2.3
PDLIM7Q9NR12 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
PDLIM7Q9NR12 AC021146.9-201ENST00000512503 156 ntBASIC0.7□□□□□ -2.3
PDLIM7Q9NR12 AC005520.4-201ENST00000604337 90 ntBASIC0.7□□□□□ -2.3
PDLIM7Q9NR12 MIR6755-201ENST00000619993 66 ntBASIC0.7□□□□□ -2.3
PDLIM7Q9NR12 MIR6739-201ENST00000622461 75 ntBASIC0.7□□□□□ -2.3
PDLIM7Q9NR12 RNU6-668P-201ENST00000364180 107 ntBASIC0.69□□□□□ -2.3
PDLIM7Q9NR12 MIR548E-201ENST00000408287 88 ntBASIC0.69□□□□□ -2.3
PDLIM7Q9NR12 MIR2909-201ENST00000617113 69 ntBASIC0.69□□□□□ -2.3
PDLIM7Q9NR12 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
PDLIM7Q9NR12 Y_RNA.250-201ENST00000364542 110 ntBASIC0.68□□□□□ -2.3
PDLIM7Q9NR12 RNU6-945P-201ENST00000383947 107 ntBASIC0.68□□□□□ -2.3
PDLIM7Q9NR12 RNU6-656P-201ENST00000516785 107 ntBASIC0.68□□□□□ -2.3
PDLIM7Q9NR12 U7.6-201ENST00000610841 64 ntBASIC0.68□□□□□ -2.3
PDLIM7Q9NR12 SNORA25.4-201ENST00000363666 124 ntBASIC0.67□□□□□ -2.3
PDLIM7Q9NR12 SNORA63.6-201ENST00000364921 119 ntBASIC0.67□□□□□ -2.3
PDLIM7Q9NR12 Y_RNA.340-201ENST00000365330 92 ntBASIC0.67□□□□□ -2.3
PDLIM7Q9NR12 RNU6-1162P-201ENST00000384443 104 ntBASIC0.67□□□□□ -2.3
PDLIM7Q9NR12 AC125388.1-201ENST00000459631 156 ntBASIC0.67□□□□□ -2.3
PDLIM7Q9NR12 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.67□□□□□ -2.3
PDLIM7Q9NR12 RNA5SP476-201ENST00000516613 103 ntBASIC0.66□□□□□ -2.3
PDLIM7Q9NR12 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.66□□□□□ -2.3
PDLIM7Q9NR12 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.3
PDLIM7Q9NR12 MIR521-2-201ENST00000384818 87 ntBASIC0.65□□□□□ -2.31
PDLIM7Q9NR12 MIR516B1-201ENST00000385211 90 ntBASIC0.65□□□□□ -2.31
PDLIM7Q9NR12 MIR760-201ENST00000390220 80 ntBASIC0.65□□□□□ -2.31
PDLIM7Q9NR12 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
PDLIM7Q9NR12 MIR501-201ENST00000390204 84 ntBASIC0.64□□□□□ -2.31
PDLIM7Q9NR12 Y_RNA.633-201ENST00000459107 95 ntBASIC0.64□□□□□ -2.31
PDLIM7Q9NR12 MIR20A-201ENST00000362279 71 ntBASIC0.63□□□□□ -2.31
PDLIM7Q9NR12 SNORD44.1-201ENST00000363202 61 ntBASIC0.63□□□□□ -2.31
PDLIM7Q9NR12 SNORA15B-2-201ENST00000384058 135 ntBASIC0.63□□□□□ -2.31
PDLIM7Q9NR12 SNORA15B-1-201ENST00000384334 135 ntBASIC0.63□□□□□ -2.31
PDLIM7Q9NR12 MIR1265-201ENST00000408444 86 ntBASIC0.63□□□□□ -2.31
PDLIM7Q9NR12 RNU6-848P-201ENST00000515948 107 ntBASIC0.63□□□□□ -2.31
PDLIM7Q9NR12 RNU6-617P-201ENST00000516147 107 ntBASIC0.63□□□□□ -2.31
PDLIM7Q9NR12 RNU6-473P-201ENST00000516164 107 ntBASIC0.63□□□□□ -2.31
PDLIM7Q9NR12 RNU6-1049P-201ENST00000516414 107 ntBASIC0.63□□□□□ -2.31
PDLIM7Q9NR12 MIR4677-201ENST00000584153 80 ntBASIC0.63□□□□□ -2.31
PDLIM7Q9NR12 MIR5087-201ENST00000635826 76 ntBASIC0.63□□□□□ -2.31
PDLIM7Q9NR12 SNORA33.1-201ENST00000364957 130 ntBASIC0.62□□□□□ -2.31
PDLIM7Q9NR12 AC244090.1-201ENST00000441884 93 ntBASIC0.62□□□□□ -2.31
PDLIM7Q9NR12 AL157398.1-201ENST00000452981 186 ntBASIC0.62□□□□□ -2.31
PDLIM7Q9NR12 SNORD114-29-201ENST00000364819 70 ntBASIC0.61□□□□□ -2.31
PDLIM7Q9NR12 RNU7-188P-201ENST00000517063 64 ntBASIC0.61□□□□□ -2.31
PDLIM7Q9NR12 MIR548AD-201ENST00000584780 82 ntBASIC0.61□□□□□ -2.31
PDLIM7Q9NR12 RNA5SP128-201ENST00000365305 116 ntBASIC0.6□□□□□ -2.31
PDLIM7Q9NR12 RNU6-471P-201ENST00000383944 106 ntBASIC0.6□□□□□ -2.31
PDLIM7Q9NR12 SNORA68.3-201ENST00000515906 83 ntBASIC0.6□□□□□ -2.31
PDLIM7Q9NR12 RNU7-129P-201ENST00000516128 62 ntBASIC0.6□□□□□ -2.31
PDLIM7Q9NR12 MIR499B-201ENST00000636498 73 ntBASIC0.6□□□□□ -2.31
PDLIM7Q9NR12 MIR548C-201ENST00000384815 97 ntBASIC0.59□□□□□ -2.31
PDLIM7Q9NR12 MIR92A1-201ENST00000385233 78 ntBASIC0.59□□□□□ -2.31
PDLIM7Q9NR12 RNU6-863P-201ENST00000515989 104 ntBASIC0.59□□□□□ -2.31
PDLIM7Q9NR12 RNU6-1089P-201ENST00000516473 104 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 167.2 ms