Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 MIR7110-201ENST00000612638 86 ntBASIC1.38□□□□□ -2.19
PRDM9Q9NQV7 Y_RNA.282-201ENST00000364793 102 ntBASIC1.37□□□□□ -2.19
PRDM9Q9NQV7 SNORA40.16-201ENST00000517238 121 ntBASIC1.37□□□□□ -2.19
PRDM9Q9NQV7 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
PRDM9Q9NQV7 MIR150-201ENST00000385048 84 ntBASIC1.36□□□□□ -2.19
PRDM9Q9NQV7 MIR527-201ENST00000385244 85 ntBASIC1.36□□□□□ -2.19
PRDM9Q9NQV7 MIR1287-201ENST00000408492 90 ntBASIC1.36□□□□□ -2.19
PRDM9Q9NQV7 RNU6-955P-201ENST00000410497 104 ntBASIC1.36□□□□□ -2.19
PRDM9Q9NQV7 RNU1-29P-201ENST00000606574 126 ntBASIC1.36□□□□□ -2.19
PRDM9Q9NQV7 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.36□□□□□ -2.19
PRDM9Q9NQV7 AC090617.8-201ENST00000623339 167 ntBASIC1.36□□□□□ -2.19
PRDM9Q9NQV7 SNORD114-29-201ENST00000364819 70 ntBASIC1.35□□□□□ -2.19
PRDM9Q9NQV7 SNORD116.2-201ENST00000391251 93 ntBASIC1.35□□□□□ -2.19
PRDM9Q9NQV7 MIR1255B2-201ENST00000408618 67 ntBASIC1.35□□□□□ -2.19
PRDM9Q9NQV7 U7.6-201ENST00000610841 64 ntBASIC1.35□□□□□ -2.19
PRDM9Q9NQV7 MIR7974-201ENST00000615835 79 ntBASIC1.35□□□□□ -2.19
PRDM9Q9NQV7 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.35□□□□□ -2.19
PRDM9Q9NQV7 MIR429-201ENST00000362106 83 ntBASIC1.34□□□□□ -2.19
PRDM9Q9NQV7 RNU6-246P-201ENST00000384702 107 ntBASIC1.34□□□□□ -2.19
PRDM9Q9NQV7 MIR519A2-201ENST00000384990 87 ntBASIC1.34□□□□□ -2.19
PRDM9Q9NQV7 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
PRDM9Q9NQV7 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.2
PRDM9Q9NQV7 RNU4-33P-201ENST00000364316 85 ntBASIC1.33□□□□□ -2.2
PRDM9Q9NQV7 SNORA40B-201ENST00000385573 128 ntBASIC1.33□□□□□ -2.2
PRDM9Q9NQV7 RNU7-95P-201ENST00000459222 64 ntBASIC1.33□□□□□ -2.2
PRDM9Q9NQV7 TRMT112P2-201ENST00000512910 132 ntBASIC1.33□□□□□ -2.2
PRDM9Q9NQV7 RNA5SP470-201ENST00000516463 106 ntBASIC1.32□□□□□ -2.2
PRDM9Q9NQV7 MIR4752-201ENST00000579672 72 ntBASIC1.32□□□□□ -2.2
PRDM9Q9NQV7 AL353765.1-201ENST00000605514 183 ntBASIC1.32□□□□□ -2.2
PRDM9Q9NQV7 MIR8070-201ENST00000616510 88 ntBASIC1.32□□□□□ -2.2
PRDM9Q9NQV7 MIR499A-201ENST00000384903 122 ntBASIC1.31□□□□□ -2.2
PRDM9Q9NQV7 RNA5SP222-201ENST00000411039 105 ntBASIC1.31□□□□□ -2.2
PRDM9Q9NQV7 MIR4421-201ENST00000578133 69 ntBASIC1.3□□□□□ -2.2
PRDM9Q9NQV7 MIR548X-201ENST00000580069 75 ntBASIC1.3□□□□□ -2.2
PRDM9Q9NQV7 MIR6773-201ENST00000612812 74 ntBASIC1.3□□□□□ -2.2
PRDM9Q9NQV7 RNU6-35P-201ENST00000384530 107 ntBASIC1.29□□□□□ -2.2
PRDM9Q9NQV7 SNORD115-25-201ENST00000362619 82 ntBASIC1.28□□□□□ -2.2
PRDM9Q9NQV7 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
PRDM9Q9NQV7 RNU6-337P-201ENST00000391243 106 ntBASIC1.28□□□□□ -2.2
PRDM9Q9NQV7 MIR26B-201ENST00000362251 77 ntBASIC1.27□□□□□ -2.21
PRDM9Q9NQV7 SNORD1B-201ENST00000363091 84 ntBASIC1.27□□□□□ -2.21
PRDM9Q9NQV7 RNA5SP517-201ENST00000364724 117 ntBASIC1.26□□□□□ -2.21
PRDM9Q9NQV7 RNU6-392P-201ENST00000364926 101 ntBASIC1.26□□□□□ -2.21
PRDM9Q9NQV7 MIR140-201ENST00000385282 100 ntBASIC1.26□□□□□ -2.21
PRDM9Q9NQV7 SNORA49-201ENST00000386157 136 ntBASIC1.26□□□□□ -2.21
PRDM9Q9NQV7 RNU6-930P-201ENST00000390938 100 ntBASIC1.26□□□□□ -2.21
PRDM9Q9NQV7 RNA5SP61-201ENST00000516453 100 ntBASIC1.26□□□□□ -2.21
PRDM9Q9NQV7 MIR3660-201ENST00000584845 100 ntBASIC1.26□□□□□ -2.21
PRDM9Q9NQV7 SNORA2A-201ENST00000383885 135 ntBASIC1.25□□□□□ -2.21
PRDM9Q9NQV7 RNU6-172P-201ENST00000411000 93 ntBASIC1.25□□□□□ -2.21
PRDM9Q9NQV7 RNU6-848P-201ENST00000515948 107 ntBASIC1.25□□□□□ -2.21
PRDM9Q9NQV7 RNU6-617P-201ENST00000516147 107 ntBASIC1.25□□□□□ -2.21
PRDM9Q9NQV7 RNU6-473P-201ENST00000516164 107 ntBASIC1.25□□□□□ -2.21
PRDM9Q9NQV7 RNU6-1049P-201ENST00000516414 107 ntBASIC1.25□□□□□ -2.21
PRDM9Q9NQV7 Y_RNA.327-201ENST00000365201 102 ntBASIC1.24□□□□□ -2.21
PRDM9Q9NQV7 MIRLET7B-201ENST00000385140 83 ntBASIC1.24□□□□□ -2.21
PRDM9Q9NQV7 AC069271.1-201ENST00000445577 156 ntBASIC1.24□□□□□ -2.21
PRDM9Q9NQV7 RNU7-188P-201ENST00000517063 64 ntBASIC1.24□□□□□ -2.21
PRDM9Q9NQV7 MIR7111-201ENST00000619751 72 ntBASIC1.24□□□□□ -2.21
PRDM9Q9NQV7 SNORD118-201ENST00000363593 134 ntBASIC1.23□□□□□ -2.21
PRDM9Q9NQV7 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.23□□□□□ -2.21
PRDM9Q9NQV7 MIR4661-201ENST00000582720 75 ntBASIC1.23□□□□□ -2.21
PRDM9Q9NQV7 AL353770.2-201ENST00000620024 78 ntBASIC1.23□□□□□ -2.21
PRDM9Q9NQV7 RNU6-810P-201ENST00000364001 107 ntBASIC1.22□□□□□ -2.21
PRDM9Q9NQV7 RNU6-939P-201ENST00000384634 107 ntBASIC1.22□□□□□ -2.21
PRDM9Q9NQV7 AC068338.1-201ENST00000565567 176 ntBASIC1.22□□□□□ -2.21
PRDM9Q9NQV7 RNY1P8-201ENST00000383970 114 ntBASIC1.21□□□□□ -2.22
PRDM9Q9NQV7 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.21□□□□□ -2.22
PRDM9Q9NQV7 SNORA36.2-201ENST00000384004 127 ntBASIC1.2□□□□□ -2.22
PRDM9Q9NQV7 SNORA40.8-201ENST00000411034 126 ntBASIC1.2□□□□□ -2.22
PRDM9Q9NQV7 RNU6-175P-201ENST00000516896 107 ntBASIC1.2□□□□□ -2.22
PRDM9Q9NQV7 SNORA25.18-201ENST00000607153 114 ntBASIC1.2□□□□□ -2.22
PRDM9Q9NQV7 Y_RNA.109-201ENST00000363215 102 ntBASIC1.19□□□□□ -2.22
PRDM9Q9NQV7 Y_RNA.355-201ENST00000365462 98 ntBASIC1.19□□□□□ -2.22
PRDM9Q9NQV7 RNU6-458P-201ENST00000384179 107 ntBASIC1.19□□□□□ -2.22
PRDM9Q9NQV7 MIR548F3-201ENST00000408509 87 ntBASIC1.19□□□□□ -2.22
PRDM9Q9NQV7 MIR1276-201ENST00000408707 83 ntBASIC1.19□□□□□ -2.22
PRDM9Q9NQV7 SNORD71-201ENST00000411292 86 ntBASIC1.19□□□□□ -2.22
PRDM9Q9NQV7 RNU6-229P-201ENST00000516614 102 ntBASIC1.19□□□□□ -2.22
PRDM9Q9NQV7 MIR548AG1-201ENST00000579932 66 ntBASIC1.19□□□□□ -2.22
PRDM9Q9NQV7 U6.58-201ENST00000613107 107 ntBASIC1.19□□□□□ -2.22
PRDM9Q9NQV7 RNU6-502P-201ENST00000362419 108 ntBASIC1.18□□□□□ -2.22
PRDM9Q9NQV7 Y_RNA.118-201ENST00000363300 101 ntBASIC1.18□□□□□ -2.22
PRDM9Q9NQV7 ACA64.5-201ENST00000516207 127 ntBASIC1.18□□□□□ -2.22
PRDM9Q9NQV7 MIR4677-201ENST00000584153 80 ntBASIC1.18□□□□□ -2.22
PRDM9Q9NQV7 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.18□□□□□ -2.22
PRDM9Q9NQV7 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
PRDM9Q9NQV7 MIR6504-201ENST00000613520 61 ntBASIC1.17□□□□□ -2.22
PRDM9Q9NQV7 RNU7-160P-201ENST00000516660 62 ntBASIC1.16□□□□□ -2.22
PRDM9Q9NQV7 RNU6-419P-201ENST00000517030 63 ntBASIC1.16□□□□□ -2.22
PRDM9Q9NQV7 MIR6078-201ENST00000611069 100 ntBASIC1.16□□□□□ -2.22
PRDM9Q9NQV7 RNU6-838P-201ENST00000363399 108 ntBASIC1.15□□□□□ -2.23
PRDM9Q9NQV7 Y_RNA.224-201ENST00000364308 111 ntBASIC1.15□□□□□ -2.23
PRDM9Q9NQV7 MIR501-201ENST00000390204 84 ntBASIC1.15□□□□□ -2.23
PRDM9Q9NQV7 AL590095.2-201ENST00000604136 117 ntBASIC1.15□□□□□ -2.23
PRDM9Q9NQV7 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
PRDM9Q9NQV7 snoU13.18-201ENST00000459483 104 ntBASIC1.14□□□□□ -2.23
PRDM9Q9NQV7 RNU6-782P-201ENST00000516852 104 ntBASIC1.14□□□□□ -2.23
PRDM9Q9NQV7 RNU6-1036P-201ENST00000383959 104 ntBASIC1.13□□□□□ -2.23
PRDM9Q9NQV7 MIR4490-201ENST00000582647 84 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms