Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 RNU6-633P-201ENST00000362612 103 ntBASIC-0.68□□□□□ -2.52
CHMP1AQ9HD42 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.68□□□□□ -2.52
CHMP1AQ9HD42 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.68□□□□□ -2.52
CHMP1AQ9HD42 MIR203A-201ENST00000384836 110 ntBASIC-0.68□□□□□ -2.52
CHMP1AQ9HD42 MIRLET7B-201ENST00000385140 83 ntBASIC-0.68□□□□□ -2.52
CHMP1AQ9HD42 RNU6-284P-201ENST00000411105 106 ntBASIC-0.68□□□□□ -2.52
CHMP1AQ9HD42 RNU6-919P-201ENST00000516731 104 ntBASIC-0.68□□□□□ -2.52
CHMP1AQ9HD42 MIR6509-201ENST00000614603 85 ntBASIC-0.68□□□□□ -2.52
CHMP1AQ9HD42 SNORD114-31-201ENST00000363219 75 ntBASIC-0.69□□□□□ -2.52
CHMP1AQ9HD42 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.69□□□□□ -2.52
CHMP1AQ9HD42 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.69□□□□□ -2.52
CHMP1AQ9HD42 MIR6851-201ENST00000617060 67 ntBASIC-0.69□□□□□ -2.52
CHMP1AQ9HD42 RNU6-147P-201ENST00000383983 107 ntBASIC-0.7□□□□□ -2.52
CHMP1AQ9HD42 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.7□□□□□ -2.52
CHMP1AQ9HD42 AL450471.1-201ENST00000447509 127 ntBASIC-0.7□□□□□ -2.52
CHMP1AQ9HD42 AL691482.2-201ENST00000457453 84 ntBASIC-0.7□□□□□ -2.52
CHMP1AQ9HD42 RNU6-274P-201ENST00000459566 107 ntBASIC-0.7□□□□□ -2.52
CHMP1AQ9HD42 SNORD38.3-201ENST00000516599 73 ntBASIC-0.7□□□□□ -2.52
CHMP1AQ9HD42 MIR5704-201ENST00000584029 77 ntBASIC-0.7□□□□□ -2.52
CHMP1AQ9HD42 MIR3657-201ENST00000584818 117 ntBASIC-0.7□□□□□ -2.52
CHMP1AQ9HD42 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.71□□□□□ -2.52
CHMP1AQ9HD42 RNA5SP147-201ENST00000516493 109 ntBASIC-0.71□□□□□ -2.52
CHMP1AQ9HD42 IGLVI-20-201ENST00000519296 130 ntBASIC-0.71□□□□□ -2.52
CHMP1AQ9HD42 U6.96-201ENST00000636425 70 ntBASIC-0.71□□□□□ -2.52
CHMP1AQ9HD42 SNORA2.1-201ENST00000363089 137 ntBASIC-0.72□□□□□ -2.52
CHMP1AQ9HD42 SNORD114-28-201ENST00000363610 72 ntBASIC-0.72□□□□□ -2.52
CHMP1AQ9HD42 RNA5SP457-201ENST00000363657 124 ntBASIC-0.72□□□□□ -2.52
CHMP1AQ9HD42 SNORD115-23-201ENST00000364461 82 ntBASIC-0.72□□□□□ -2.52
CHMP1AQ9HD42 RNU6-32P-201ENST00000383948 107 ntBASIC-0.72□□□□□ -2.52
CHMP1AQ9HD42 RNU6-13P-201ENST00000384248 107 ntBASIC-0.72□□□□□ -2.52
CHMP1AQ9HD42 RNU6-12P-201ENST00000384604 107 ntBASIC-0.72□□□□□ -2.52
CHMP1AQ9HD42 RNU6-41P-201ENST00000384741 107 ntBASIC-0.72□□□□□ -2.52
CHMP1AQ9HD42 RNU6-592P-201ENST00000411333 103 ntBASIC-0.72□□□□□ -2.52
CHMP1AQ9HD42 MIR4645-201ENST00000583158 77 ntBASIC-0.72□□□□□ -2.52
CHMP1AQ9HD42 RNU6-208P-201ENST00000362431 107 ntBASIC-0.73□□□□□ -2.53
CHMP1AQ9HD42 RNU6-640P-201ENST00000363693 105 ntBASIC-0.73□□□□□ -2.53
CHMP1AQ9HD42 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.73□□□□□ -2.53
CHMP1AQ9HD42 MIR488-201ENST00000365739 83 ntBASIC-0.73□□□□□ -2.53
CHMP1AQ9HD42 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.73□□□□□ -2.53
CHMP1AQ9HD42 AL035461.1-201ENST00000421490 332 ntBASIC-0.73□□□□□ -2.53
CHMP1AQ9HD42 AC090617.8-201ENST00000623339 167 ntBASIC-0.73□□□□□ -2.53
CHMP1AQ9HD42 RNU6-219P-201ENST00000364728 107 ntBASIC-0.74□□□□□ -2.53
CHMP1AQ9HD42 SNORD116-22-201ENST00000384430 92 ntBASIC-0.74□□□□□ -2.53
CHMP1AQ9HD42 RNU6-905P-201ENST00000384434 107 ntBASIC-0.74□□□□□ -2.53
CHMP1AQ9HD42 MIR204-201ENST00000385200 110 ntBASIC-0.75□□□□□ -2.53
CHMP1AQ9HD42 SNORD77.2-201ENST00000391045 68 ntBASIC-0.75□□□□□ -2.53
CHMP1AQ9HD42 MIR8068-201ENST00000618032 68 ntBASIC-0.75□□□□□ -2.53
CHMP1AQ9HD42 snoR1.1-201ENST00000628177 80 ntBASIC-0.75□□□□□ -2.53
CHMP1AQ9HD42 SNORD115-37-201ENST00000363768 82 ntBASIC-0.76□□□□□ -2.53
CHMP1AQ9HD42 RNU6-340P-201ENST00000364005 107 ntBASIC-0.76□□□□□ -2.53
CHMP1AQ9HD42 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.76□□□□□ -2.53
CHMP1AQ9HD42 RNU6-497P-201ENST00000365316 104 ntBASIC-0.76□□□□□ -2.53
CHMP1AQ9HD42 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.76□□□□□ -2.53
CHMP1AQ9HD42 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.76□□□□□ -2.53
CHMP1AQ9HD42 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.76□□□□□ -2.53
CHMP1AQ9HD42 MIR7-2-201ENST00000384970 110 ntBASIC-0.76□□□□□ -2.53
CHMP1AQ9HD42 RNU6-402P-201ENST00000410678 103 ntBASIC-0.76□□□□□ -2.53
CHMP1AQ9HD42 RNU6-267P-201ENST00000516714 103 ntBASIC-0.76□□□□□ -2.53
CHMP1AQ9HD42 MIR6854-201ENST00000614935 69 ntBASIC-0.76□□□□□ -2.53
CHMP1AQ9HD42 U2.22-201ENST00000636441 106 ntBASIC-0.76□□□□□ -2.53
CHMP1AQ9HD42 Y_RNA.291-201ENST00000364886 113 ntBASIC-0.77□□□□□ -2.53
CHMP1AQ9HD42 SNORA33.1-201ENST00000364957 130 ntBASIC-0.77□□□□□ -2.53
CHMP1AQ9HD42 AC093729.1-201ENST00000513074 128 ntBASIC-0.77□□□□□ -2.53
CHMP1AQ9HD42 MIR548AI-201ENST00000579940 88 ntBASIC-0.77□□□□□ -2.53
CHMP1AQ9HD42 YWHAEP3-201ENST00000582767 121 ntBASIC-0.77□□□□□ -2.53
CHMP1AQ9HD42 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.77□□□□□ -2.53
CHMP1AQ9HD42 SNORD114-14-201ENST00000362723 75 ntBASIC-0.78□□□□□ -2.53
CHMP1AQ9HD42 RNU6-44P-201ENST00000384045 107 ntBASIC-0.78□□□□□ -2.53
CHMP1AQ9HD42 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.78□□□□□ -2.53
CHMP1AQ9HD42 RNU6-752P-201ENST00000516376 102 ntBASIC-0.78□□□□□ -2.53
CHMP1AQ9HD42 MIR6779-201ENST00000617283 64 ntBASIC-0.78□□□□□ -2.53
CHMP1AQ9HD42 RNU6-624P-201ENST00000363411 107 ntBASIC-0.79□□□□□ -2.54
CHMP1AQ9HD42 RNA5SP257-201ENST00000363023 116 ntBASIC-0.8□□□□□ -2.54
CHMP1AQ9HD42 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.8□□□□□ -2.54
CHMP1AQ9HD42 RNY1P7-201ENST00000384743 110 ntBASIC-0.8□□□□□ -2.54
CHMP1AQ9HD42 SNORA3B-201ENST00000391305 131 ntBASIC-0.8□□□□□ -2.54
CHMP1AQ9HD42 RNA5SP285-201ENST00000516619 119 ntBASIC-0.8□□□□□ -2.54
CHMP1AQ9HD42 AC140658.3-201ENST00000567603 271 ntBASIC-0.8□□□□□ -2.54
CHMP1AQ9HD42 MIR8064-201ENST00000612863 90 ntBASIC-0.8□□□□□ -2.54
CHMP1AQ9HD42 MIR6759-201ENST00000638110 65 ntBASIC-0.8□□□□□ -2.54
CHMP1AQ9HD42 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.81□□□□□ -2.54
CHMP1AQ9HD42 MIR518B-201ENST00000385127 83 ntBASIC-0.81□□□□□ -2.54
CHMP1AQ9HD42 SNORA13-201ENST00000458790 133 ntBASIC-0.81□□□□□ -2.54
CHMP1AQ9HD42 MIR548AZ-201ENST00000616567 95 ntBASIC-0.81□□□□□ -2.54
CHMP1AQ9HD42 MIR548BB-201ENST00000626714 66 ntBASIC-0.81□□□□□ -2.54
CHMP1AQ9HD42 RNU6-681P-201ENST00000364012 104 ntBASIC-0.82□□□□□ -2.54
CHMP1AQ9HD42 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.82□□□□□ -2.54
CHMP1AQ9HD42 SNORA32.3-201ENST00000384772 121 ntBASIC-0.82□□□□□ -2.54
CHMP1AQ9HD42 MIR4436A-201ENST00000585278 85 ntBASIC-0.82□□□□□ -2.54
CHMP1AQ9HD42 MIR521-2-201ENST00000384818 87 ntBASIC-0.84□□□□□ -2.54
CHMP1AQ9HD42 AC021146.6-201ENST00000514659 117 ntBASIC-0.84□□□□□ -2.54
CHMP1AQ9HD42 SNORD22.1-201ENST00000516331 125 ntBASIC-0.84□□□□□ -2.54
CHMP1AQ9HD42 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.85□□□□□ -2.55
CHMP1AQ9HD42 CYP3A54P-201ENST00000566950 75 ntBASIC-0.85□□□□□ -2.55
CHMP1AQ9HD42 MIR3179-1-201ENST00000578940 84 ntBASIC-0.85□□□□□ -2.55
CHMP1AQ9HD42 MIR3179-2-201ENST00000579107 84 ntBASIC-0.85□□□□□ -2.55
CHMP1AQ9HD42 MIR3179-3-201ENST00000579566 84 ntBASIC-0.85□□□□□ -2.55
CHMP1AQ9HD42 MIR3179-4-201ENST00000617599 84 ntBASIC-0.85□□□□□ -2.55
CHMP1AQ9HD42 MIR6739-201ENST00000622461 75 ntBASIC-0.85□□□□□ -2.55
CHMP1AQ9HD42 RNU6-675P-201ENST00000384236 104 ntBASIC-0.86□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 235.7 ms