Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AL590095.2-201ENST00000604136 117 ntBASIC0.68□□□□□ -2.3
SEC61A2Q9H9S3 SNORA33.1-201ENST00000364957 130 ntBASIC0.67□□□□□ -2.3
SEC61A2Q9H9S3 CYP3A137P-201ENST00000562436 69 ntBASIC0.67□□□□□ -2.3
SEC61A2Q9H9S3 MIR151B-201ENST00000584249 96 ntBASIC0.67□□□□□ -2.3
SEC61A2Q9H9S3 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.67□□□□□ -2.3
SEC61A2Q9H9S3 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
SEC61A2Q9H9S3 Y_RNA.125-201ENST00000363371 111 ntBASIC0.66□□□□□ -2.3
SEC61A2Q9H9S3 SNORA63.6-201ENST00000364921 119 ntBASIC0.66□□□□□ -2.3
SEC61A2Q9H9S3 MIR516B1-201ENST00000385211 90 ntBASIC0.66□□□□□ -2.3
SEC61A2Q9H9S3 RNA5SP220-201ENST00000516298 104 ntBASIC0.66□□□□□ -2.3
SEC61A2Q9H9S3 MIR548V-201ENST00000584165 80 ntBASIC0.66□□□□□ -2.3
SEC61A2Q9H9S3 MIR6755-201ENST00000619993 66 ntBASIC0.66□□□□□ -2.3
SEC61A2Q9H9S3 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.66□□□□□ -2.3
SEC61A2Q9H9S3 Y_RNA.250-201ENST00000364542 110 ntBASIC0.65□□□□□ -2.31
SEC61A2Q9H9S3 MIR521-2-201ENST00000384818 87 ntBASIC0.65□□□□□ -2.31
SEC61A2Q9H9S3 RNU6-1089P-201ENST00000516473 104 ntBASIC0.65□□□□□ -2.31
SEC61A2Q9H9S3 MIR4511-201ENST00000582784 87 ntBASIC0.65□□□□□ -2.31
SEC61A2Q9H9S3 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
SEC61A2Q9H9S3 Y_RNA.633-201ENST00000459107 95 ntBASIC0.64□□□□□ -2.31
SEC61A2Q9H9S3 MIR4714-201ENST00000580728 77 ntBASIC0.64□□□□□ -2.31
SEC61A2Q9H9S3 MIR6835-201ENST00000621552 64 ntBASIC0.64□□□□□ -2.31
SEC61A2Q9H9S3 Y_RNA.375-201ENST00000365625 101 ntBASIC0.63□□□□□ -2.31
SEC61A2Q9H9S3 RNU6-945P-201ENST00000383947 107 ntBASIC0.63□□□□□ -2.31
SEC61A2Q9H9S3 RNU6-42P-201ENST00000384165 107 ntBASIC0.63□□□□□ -2.31
SEC61A2Q9H9S3 MIR760-201ENST00000390220 80 ntBASIC0.63□□□□□ -2.31
SEC61A2Q9H9S3 AC098934.3-201ENST00000430450 190 ntBASIC0.63□□□□□ -2.31
SEC61A2Q9H9S3 MIR4653-201ENST00000585107 83 ntBASIC0.63□□□□□ -2.31
SEC61A2Q9H9S3 SNORA15B-2-201ENST00000384058 135 ntBASIC0.62□□□□□ -2.31
SEC61A2Q9H9S3 SNORA15B-1-201ENST00000384334 135 ntBASIC0.62□□□□□ -2.31
SEC61A2Q9H9S3 MIR508-201ENST00000384857 115 ntBASIC0.62□□□□□ -2.31
SEC61A2Q9H9S3 RNA5SP299-201ENST00000391203 116 ntBASIC0.62□□□□□ -2.31
SEC61A2Q9H9S3 RNU7-129P-201ENST00000516128 62 ntBASIC0.62□□□□□ -2.31
SEC61A2Q9H9S3 RNU7-188P-201ENST00000517063 64 ntBASIC0.62□□□□□ -2.31
SEC61A2Q9H9S3 AC103706.3-201ENST00000636297 85 ntBASIC0.62□□□□□ -2.31
SEC61A2Q9H9S3 MIR20A-201ENST00000362279 71 ntBASIC0.61□□□□□ -2.31
SEC61A2Q9H9S3 Y_RNA.355-201ENST00000365462 98 ntBASIC0.61□□□□□ -2.31
SEC61A2Q9H9S3 MIR501-201ENST00000390204 84 ntBASIC0.61□□□□□ -2.31
SEC61A2Q9H9S3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.61□□□□□ -2.31
SEC61A2Q9H9S3 RNA5SP436-201ENST00000516020 115 ntBASIC0.61□□□□□ -2.31
SEC61A2Q9H9S3 MIR5000-201ENST00000577717 103 ntBASIC0.61□□□□□ -2.31
SEC61A2Q9H9S3 U7.6-201ENST00000610841 64 ntBASIC0.61□□□□□ -2.31
SEC61A2Q9H9S3 MIR6734-201ENST00000621166 68 ntBASIC0.61□□□□□ -2.31
SEC61A2Q9H9S3 U6.96-201ENST00000636425 70 ntBASIC0.61□□□□□ -2.31
SEC61A2Q9H9S3 MIR499B-201ENST00000636498 73 ntBASIC0.61□□□□□ -2.31
SEC61A2Q9H9S3 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.6□□□□□ -2.31
SEC61A2Q9H9S3 RNU6-542P-201ENST00000516405 103 ntBASIC0.6□□□□□ -2.31
SEC61A2Q9H9S3 RNU6-1223P-201ENST00000517124 104 ntBASIC0.6□□□□□ -2.31
SEC61A2Q9H9S3 MIR4677-201ENST00000584153 80 ntBASIC0.6□□□□□ -2.31
SEC61A2Q9H9S3 MIR630-201ENST00000384957 97 ntBASIC0.59□□□□□ -2.31
SEC61A2Q9H9S3 AC244090.1-201ENST00000441884 93 ntBASIC0.59□□□□□ -2.31
SEC61A2Q9H9S3 AC022709.1-201ENST00000615967 87 ntBASIC0.59□□□□□ -2.31
SEC61A2Q9H9S3 SNORD114-29-201ENST00000364819 70 ntBASIC0.58□□□□□ -2.32
SEC61A2Q9H9S3 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
SEC61A2Q9H9S3 AC243829.6-201ENST00000612652 106 ntBASIC0.58□□□□□ -2.32
SEC61A2Q9H9S3 U2.7-201ENST00000619197 100 ntBASIC0.58□□□□□ -2.32
SEC61A2Q9H9S3 AC084368.1-201ENST00000620935 65 ntBASIC0.58□□□□□ -2.32
SEC61A2Q9H9S3 AC090617.8-201ENST00000623339 167 ntBASIC0.58□□□□□ -2.32
SEC61A2Q9H9S3 SNORD44.1-201ENST00000363202 61 ntBASIC0.57□□□□□ -2.32
SEC61A2Q9H9S3 RNA5SP215-201ENST00000363440 122 ntBASIC0.57□□□□□ -2.32
SEC61A2Q9H9S3 Y_RNA.118-201ENST00000363300 101 ntBASIC0.56□□□□□ -2.32
SEC61A2Q9H9S3 RNA5SP128-201ENST00000365305 116 ntBASIC0.56□□□□□ -2.32
SEC61A2Q9H9S3 AC110620.1-201ENST00000416042 228 ntBASIC0.56□□□□□ -2.32
SEC61A2Q9H9S3 snoU13.18-201ENST00000459483 104 ntBASIC0.56□□□□□ -2.32
SEC61A2Q9H9S3 SNORA68.3-201ENST00000515906 83 ntBASIC0.56□□□□□ -2.32
SEC61A2Q9H9S3 CYP3A54P-201ENST00000566950 75 ntBASIC0.56□□□□□ -2.32
SEC61A2Q9H9S3 MIR103A1-201ENST00000362165 78 ntBASIC0.55□□□□□ -2.32
SEC61A2Q9H9S3 MIR517B-201ENST00000385102 67 ntBASIC0.55□□□□□ -2.32
SEC61A2Q9H9S3 SCARNA21.1-201ENST00000515996 128 ntBASIC0.55□□□□□ -2.32
SEC61A2Q9H9S3 RNU6-175P-201ENST00000516896 107 ntBASIC0.55□□□□□ -2.32
SEC61A2Q9H9S3 MIR3925-201ENST00000584674 77 ntBASIC0.55□□□□□ -2.32
SEC61A2Q9H9S3 MIR548AD-201ENST00000584780 82 ntBASIC0.55□□□□□ -2.32
SEC61A2Q9H9S3 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
SEC61A2Q9H9S3 RNA5SP499-201ENST00000363982 119 ntBASIC0.54□□□□□ -2.32
SEC61A2Q9H9S3 RNA5SP192-201ENST00000364404 120 ntBASIC0.54□□□□□ -2.32
SEC61A2Q9H9S3 RNU6-1036P-201ENST00000383959 104 ntBASIC0.54□□□□□ -2.32
SEC61A2Q9H9S3 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.54□□□□□ -2.32
SEC61A2Q9H9S3 MIR489-201ENST00000384923 84 ntBASIC0.53□□□□□ -2.32
SEC61A2Q9H9S3 SNORA49-201ENST00000386157 136 ntBASIC0.53□□□□□ -2.32
SEC61A2Q9H9S3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.53□□□□□ -2.32
SEC61A2Q9H9S3 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.53□□□□□ -2.32
SEC61A2Q9H9S3 RN7SL660P-201ENST00000614852 299 ntBASIC0.53□□□□□ -2.32
SEC61A2Q9H9S3 SNORA25.5-201ENST00000363782 126 ntBASIC0.52□□□□□ -2.33
SEC61A2Q9H9S3 RNU6-302P-201ENST00000365249 107 ntBASIC0.52□□□□□ -2.33
SEC61A2Q9H9S3 MIR92A1-201ENST00000385233 78 ntBASIC0.52□□□□□ -2.33
SEC61A2Q9H9S3 SNORA75.1-201ENST00000391130 148 ntBASIC0.52□□□□□ -2.33
SEC61A2Q9H9S3 RNU7-174P-201ENST00000516248 59 ntBASIC0.52□□□□□ -2.33
SEC61A2Q9H9S3 MIR1255B2-201ENST00000408618 67 ntBASIC0.51□□□□□ -2.33
SEC61A2Q9H9S3 RNU6-848P-201ENST00000515948 107 ntBASIC0.51□□□□□ -2.33
SEC61A2Q9H9S3 RNU6-617P-201ENST00000516147 107 ntBASIC0.51□□□□□ -2.33
SEC61A2Q9H9S3 RNU6-473P-201ENST00000516164 107 ntBASIC0.51□□□□□ -2.33
SEC61A2Q9H9S3 RNU6-1049P-201ENST00000516414 107 ntBASIC0.51□□□□□ -2.33
SEC61A2Q9H9S3 RNA5SP121-201ENST00000516537 101 ntBASIC0.51□□□□□ -2.33
SEC61A2Q9H9S3 MIR6515-201ENST00000619843 57 ntBASIC0.51□□□□□ -2.33
SEC61A2Q9H9S3 uc_338.17-201ENST00000619633 179 ntBASIC0.5□□□□□ -2.33
SEC61A2Q9H9S3 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
SEC61A2Q9H9S3 RNU6-698P-201ENST00000363523 107 ntBASIC0.49□□□□□ -2.33
SEC61A2Q9H9S3 RNU6-34P-201ENST00000364874 107 ntBASIC0.49□□□□□ -2.33
SEC61A2Q9H9S3 RNU6-337P-201ENST00000391243 106 ntBASIC0.49□□□□□ -2.33
SEC61A2Q9H9S3 RNU6-518P-201ENST00000516056 96 ntBASIC0.49□□□□□ -2.33
SEC61A2Q9H9S3 SCARNA11.2-201ENST00000517183 154 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 183.5 ms