Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 HMGN2P22-201ENST00000427588 175 ntBASIC0.8□□□□□ -2.28
RNF38Q9H0F5 RNU4-54P-201ENST00000516428 129 ntBASIC0.8□□□□□ -2.28
RNF38Q9H0F5 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
RNF38Q9H0F5 Y_RNA.423-201ENST00000384057 113 ntBASIC0.79□□□□□ -2.28
RNF38Q9H0F5 MIR548C-201ENST00000384815 97 ntBASIC0.79□□□□□ -2.28
RNF38Q9H0F5 MIR598-201ENST00000384868 97 ntBASIC0.79□□□□□ -2.28
RNF38Q9H0F5 MIR4714-201ENST00000580728 77 ntBASIC0.79□□□□□ -2.28
RNF38Q9H0F5 SNORD71-201ENST00000411292 86 ntBASIC0.78□□□□□ -2.28
RNF38Q9H0F5 MIR6835-201ENST00000621552 64 ntBASIC0.78□□□□□ -2.28
RNF38Q9H0F5 MIR6739-201ENST00000622461 75 ntBASIC0.78□□□□□ -2.28
RNF38Q9H0F5 SNORD114-26-201ENST00000363543 72 ntBASIC0.77□□□□□ -2.29
RNF38Q9H0F5 SNORD118-201ENST00000363593 134 ntBASIC0.77□□□□□ -2.29
RNF38Q9H0F5 SNORA63.6-201ENST00000364921 119 ntBASIC0.77□□□□□ -2.29
RNF38Q9H0F5 RNU6-1162P-201ENST00000384443 104 ntBASIC0.77□□□□□ -2.29
RNF38Q9H0F5 MIR548E-201ENST00000408287 88 ntBASIC0.77□□□□□ -2.29
RNF38Q9H0F5 SNORA40.8-201ENST00000411034 126 ntBASIC0.77□□□□□ -2.29
RNF38Q9H0F5 AL157398.1-201ENST00000452981 186 ntBASIC0.77□□□□□ -2.29
RNF38Q9H0F5 RNA5SP480-201ENST00000516840 109 ntBASIC0.77□□□□□ -2.29
RNF38Q9H0F5 uc_338.10-201ENST00000621872 182 ntBASIC0.77□□□□□ -2.29
RNF38Q9H0F5 RNU6-1232P-201ENST00000516299 86 ntBASIC0.76□□□□□ -2.29
RNF38Q9H0F5 RNU6-229P-201ENST00000516614 102 ntBASIC0.76□□□□□ -2.29
RNF38Q9H0F5 MIR4511-201ENST00000582784 87 ntBASIC0.76□□□□□ -2.29
RNF38Q9H0F5 MIR548V-201ENST00000584165 80 ntBASIC0.76□□□□□ -2.29
RNF38Q9H0F5 MIR6866-201ENST00000638146 69 ntBASIC0.76□□□□□ -2.29
RNF38Q9H0F5 AL590095.2-201ENST00000604136 117 ntBASIC0.75□□□□□ -2.29
RNF38Q9H0F5 PVT1_3.1-201ENST00000620853 95 ntBASIC0.75□□□□□ -2.29
RNF38Q9H0F5 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.75□□□□□ -2.29
RNF38Q9H0F5 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
RNF38Q9H0F5 Y_RNA.250-201ENST00000364542 110 ntBASIC0.74□□□□□ -2.29
RNF38Q9H0F5 SNORA33.1-201ENST00000364957 130 ntBASIC0.74□□□□□ -2.29
RNF38Q9H0F5 MIR521-2-201ENST00000384818 87 ntBASIC0.74□□□□□ -2.29
RNF38Q9H0F5 RNU6-1089P-201ENST00000516473 104 ntBASIC0.74□□□□□ -2.29
RNF38Q9H0F5 AC103706.3-201ENST00000636297 85 ntBASIC0.74□□□□□ -2.29
RNF38Q9H0F5 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
RNF38Q9H0F5 Y_RNA.375-201ENST00000365625 101 ntBASIC0.73□□□□□ -2.29
RNF38Q9H0F5 SNORA2A-201ENST00000383885 135 ntBASIC0.73□□□□□ -2.29
RNF38Q9H0F5 MIR508-201ENST00000384857 115 ntBASIC0.73□□□□□ -2.29
RNF38Q9H0F5 MIR518A1-201ENST00000385068 85 ntBASIC0.73□□□□□ -2.29
RNF38Q9H0F5 RNA5SP299-201ENST00000391203 116 ntBASIC0.73□□□□□ -2.29
RNF38Q9H0F5 MIR5706-201ENST00000579841 80 ntBASIC0.73□□□□□ -2.29
RNF38Q9H0F5 Y_RNA.125-201ENST00000363371 111 ntBASIC0.72□□□□□ -2.29
RNF38Q9H0F5 MIR516B1-201ENST00000385211 90 ntBASIC0.71□□□□□ -2.3
RNF38Q9H0F5 RNU6-542P-201ENST00000516405 103 ntBASIC0.71□□□□□ -2.3
RNF38Q9H0F5 MIR6755-201ENST00000619993 66 ntBASIC0.71□□□□□ -2.3
RNF38Q9H0F5 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.7□□□□□ -2.3
RNF38Q9H0F5 MIR760-201ENST00000390220 80 ntBASIC0.7□□□□□ -2.3
RNF38Q9H0F5 Y_RNA.633-201ENST00000459107 95 ntBASIC0.7□□□□□ -2.3
RNF38Q9H0F5 RNU7-129P-201ENST00000516128 62 ntBASIC0.7□□□□□ -2.3
RNF38Q9H0F5 RNU6-945P-201ENST00000383947 107 ntBASIC0.69□□□□□ -2.3
RNF38Q9H0F5 SNORA15B-2-201ENST00000384058 135 ntBASIC0.69□□□□□ -2.3
RNF38Q9H0F5 SNORA15B-1-201ENST00000384334 135 ntBASIC0.69□□□□□ -2.3
RNF38Q9H0F5 RNU7-188P-201ENST00000517063 64 ntBASIC0.69□□□□□ -2.3
RNF38Q9H0F5 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.68□□□□□ -2.3
RNF38Q9H0F5 RNA5SP121-201ENST00000516537 101 ntBASIC0.68□□□□□ -2.3
RNF38Q9H0F5 U6.96-201ENST00000636425 70 ntBASIC0.68□□□□□ -2.3
RNF38Q9H0F5 MIR20A-201ENST00000362279 71 ntBASIC0.67□□□□□ -2.3
RNF38Q9H0F5 MIR501-201ENST00000390204 84 ntBASIC0.67□□□□□ -2.3
RNF38Q9H0F5 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
RNF38Q9H0F5 AC098934.3-201ENST00000430450 190 ntBASIC0.67□□□□□ -2.3
RNF38Q9H0F5 U7.6-201ENST00000610841 64 ntBASIC0.67□□□□□ -2.3
RNF38Q9H0F5 RNA5SP215-201ENST00000363440 122 ntBASIC0.66□□□□□ -2.3
RNF38Q9H0F5 MIR630-201ENST00000384957 97 ntBASIC0.66□□□□□ -2.3
RNF38Q9H0F5 AC110620.1-201ENST00000416042 228 ntBASIC0.66□□□□□ -2.3
RNF38Q9H0F5 SCARNA21.1-201ENST00000515996 128 ntBASIC0.66□□□□□ -2.3
RNF38Q9H0F5 MIR6513-201ENST00000621188 64 ntBASIC0.66□□□□□ -2.3
RNF38Q9H0F5 SNORD114-29-201ENST00000364819 70 ntBASIC0.65□□□□□ -2.31
RNF38Q9H0F5 AC244090.1-201ENST00000441884 93 ntBASIC0.65□□□□□ -2.31
RNF38Q9H0F5 MIR4677-201ENST00000584153 80 ntBASIC0.65□□□□□ -2.31
RNF38Q9H0F5 U2.7-201ENST00000619197 100 ntBASIC0.65□□□□□ -2.31
RNF38Q9H0F5 MIR499B-201ENST00000636498 73 ntBASIC0.65□□□□□ -2.31
RNF38Q9H0F5 RNA5SP499-201ENST00000363982 119 ntBASIC0.64□□□□□ -2.31
RNF38Q9H0F5 RNA5SP192-201ENST00000364404 120 ntBASIC0.64□□□□□ -2.31
RNF38Q9H0F5 RN7SL793P-201ENST00000583259 296 ntBASIC0.64□□□□□ -2.31
RNF38Q9H0F5 AC084368.1-201ENST00000620935 65 ntBASIC0.64□□□□□ -2.31
RNF38Q9H0F5 AC090617.8-201ENST00000623339 167 ntBASIC0.64□□□□□ -2.31
RNF38Q9H0F5 SNORA25.5-201ENST00000363782 126 ntBASIC0.63□□□□□ -2.31
RNF38Q9H0F5 MIR936-201ENST00000401264 98 ntBASIC0.63□□□□□ -2.31
RNF38Q9H0F5 AC243829.6-201ENST00000612652 106 ntBASIC0.63□□□□□ -2.31
RNF38Q9H0F5 RNU6-302P-201ENST00000365249 107 ntBASIC0.62□□□□□ -2.31
RNF38Q9H0F5 MIR517B-201ENST00000385102 67 ntBASIC0.62□□□□□ -2.31
RNF38Q9H0F5 SNORA75.1-201ENST00000391130 148 ntBASIC0.62□□□□□ -2.31
RNF38Q9H0F5 RNA5SP128-201ENST00000365305 116 ntBASIC0.61□□□□□ -2.31
RNF38Q9H0F5 MIR216A-201ENST00000385063 110 ntBASIC0.61□□□□□ -2.31
RNF38Q9H0F5 RNA5SP193-201ENST00000410353 107 ntBASIC0.61□□□□□ -2.31
RNF38Q9H0F5 SNORA68.3-201ENST00000515906 83 ntBASIC0.61□□□□□ -2.31
RNF38Q9H0F5 CYP3A54P-201ENST00000566950 75 ntBASIC0.61□□□□□ -2.31
RNF38Q9H0F5 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.61□□□□□ -2.31
RNF38Q9H0F5 MIR633-201ENST00000384821 98 ntBASIC0.6□□□□□ -2.31
RNF38Q9H0F5 SNORA49-201ENST00000386157 136 ntBASIC0.6□□□□□ -2.31
RNF38Q9H0F5 RNU7-174P-201ENST00000516248 59 ntBASIC0.6□□□□□ -2.31
RNF38Q9H0F5 RNU6-175P-201ENST00000516896 107 ntBASIC0.6□□□□□ -2.31
RNF38Q9H0F5 MIR103A1-201ENST00000362165 78 ntBASIC0.59□□□□□ -2.31
RNF38Q9H0F5 RNA5SP347-201ENST00000362445 119 ntBASIC0.59□□□□□ -2.31
RNF38Q9H0F5 SNORD44.1-201ENST00000363202 61 ntBASIC0.59□□□□□ -2.31
RNF38Q9H0F5 RNU6-1036P-201ENST00000383959 104 ntBASIC0.59□□□□□ -2.31
RNF38Q9H0F5 MIR548AD-201ENST00000584780 82 ntBASIC0.59□□□□□ -2.31
RNF38Q9H0F5 MIR6779-201ENST00000617283 64 ntBASIC0.59□□□□□ -2.31
RNF38Q9H0F5 uc_338.17-201ENST00000619633 179 ntBASIC0.59□□□□□ -2.31
RNF38Q9H0F5 RN7SL660P-201ENST00000614852 299 ntBASIC0.58□□□□□ -2.32
RNF38Q9H0F5 U4.4-201ENST00000620626 117 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 186.3 ms