Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 RNU6-506P-201ENST00000516553 94 ntBASIC-3.71□□□□□ -3
SCAPERQ9BY12 RNU6-656P-201ENST00000516785 107 ntBASIC-3.71□□□□□ -3
SCAPERQ9BY12 Y_RNA.252-201ENST00000364556 101 ntBASIC-3.72□□□□□ -3.01
SCAPERQ9BY12 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-3.72□□□□□ -3.01
SCAPERQ9BY12 RNU6-995P-201ENST00000391244 107 ntBASIC-3.73□□□□□ -3.01
SCAPERQ9BY12 SNORA75.5-201ENST00000391291 81 ntBASIC-3.73□□□□□ -3.01
SCAPERQ9BY12 Y_RNA.590-201ENST00000410140 107 ntBASIC-3.73□□□□□ -3.01
SCAPERQ9BY12 MIR4282-201ENST00000583613 67 ntBASIC-3.73□□□□□ -3.01
SCAPERQ9BY12 RNU6-1324P-201ENST00000384222 107 ntBASIC-3.74□□□□□ -3.01
SCAPERQ9BY12 MIR1302-11-201ENST00000408051 138 ntBASIC-3.74□□□□□ -3.01
SCAPERQ9BY12 MIR1302-9-201ENST00000408365 138 ntBASIC-3.74□□□□□ -3.01
SCAPERQ9BY12 MIR1302-10-201ENST00000408734 138 ntBASIC-3.74□□□□□ -3.01
SCAPERQ9BY12 MIR3646-201ENST00000578301 84 ntBASIC-3.74□□□□□ -3.01
SCAPERQ9BY12 MIR1302-2-201ENST00000607096 138 ntBASIC-3.74□□□□□ -3.01
SCAPERQ9BY12 AC078883.4-201ENST00000623218 367 ntBASIC-3.74□□□□□ -3.01
SCAPERQ9BY12 Y_RNA.282-201ENST00000364793 102 ntBASIC-3.75□□□□□ -3.01
SCAPERQ9BY12 RNU6-987P-201ENST00000384759 104 ntBASIC-3.75□□□□□ -3.01
SCAPERQ9BY12 RNU6-644P-201ENST00000391155 98 ntBASIC-3.75□□□□□ -3.01
SCAPERQ9BY12 RNU6-752P-201ENST00000516376 102 ntBASIC-3.75□□□□□ -3.01
SCAPERQ9BY12 MIR3149-201ENST00000584629 83 ntBASIC-3.75□□□□□ -3.01
SCAPERQ9BY12 U2.18-201ENST00000622185 84 ntBASIC-3.75□□□□□ -3.01
SCAPERQ9BY12 MIRLET7A3-201ENST00000362116 74 ntBASIC-3.76□□□□□ -3.01
SCAPERQ9BY12 MIR581-201ENST00000384895 96 ntBASIC-3.76□□□□□ -3.01
SCAPERQ9BY12 Y_RNA.266-201ENST00000364678 96 ntBASIC-3.77□□□□□ -3.01
SCAPERQ9BY12 RNU6-828P-201ENST00000364876 107 ntBASIC-3.77□□□□□ -3.01
SCAPERQ9BY12 RNU6-1338P-201ENST00000516328 91 ntBASIC-3.77□□□□□ -3.01
SCAPERQ9BY12 SNORA27.2-201ENST00000363365 126 ntBASIC-3.78□□□□□ -3.01
SCAPERQ9BY12 RNY4P10-201ENST00000365571 96 ntBASIC-3.78□□□□□ -3.01
SCAPERQ9BY12 RNU6-1044P-201ENST00000384755 107 ntBASIC-3.78□□□□□ -3.01
SCAPERQ9BY12 MIR548AA1-201ENST00000384971 97 ntBASIC-3.78□□□□□ -3.01
SCAPERQ9BY12 RNA5SP106-201ENST00000517274 100 ntBASIC-3.78□□□□□ -3.01
SCAPERQ9BY12 RNU6-519P-201ENST00000410590 108 ntBASIC-3.78□□□□□ -3.02
SCAPERQ9BY12 RNY3P8-201ENST00000411366 126 ntBASIC-3.78□□□□□ -3.02
SCAPERQ9BY12 RNU5E-3P-201ENST00000515913 68 ntBASIC-3.78□□□□□ -3.02
SCAPERQ9BY12 AC002553.4-201ENST00000616896 331 ntBASIC-3.78□□□□□ -3.02
SCAPERQ9BY12 Y_RNA.166-201ENST00000363730 102 ntBASIC-3.79□□□□□ -3.02
SCAPERQ9BY12 RNU6-1215P-201ENST00000384441 102 ntBASIC-3.8□□□□□ -3.02
SCAPERQ9BY12 Y_RNA.606-201ENST00000410579 103 ntBASIC-3.8□□□□□ -3.02
SCAPERQ9BY12 RNU6-971P-201ENST00000516920 106 ntBASIC-3.8□□□□□ -3.02
SCAPERQ9BY12 AL731768.1-201ENST00000603124 139 ntBASIC-3.8□□□□□ -3.02
SCAPERQ9BY12 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-3.8□□□□□ -3.02
SCAPERQ9BY12 MIR6844-201ENST00000637122 62 ntBASIC-3.8□□□□□ -3.02
SCAPERQ9BY12 SNORA40.15-201ENST00000516884 107 ntBASIC-3.81□□□□□ -3.02
SCAPERQ9BY12 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-3.81□□□□□ -3.02
SCAPERQ9BY12 RNY1P1-201ENST00000364372 112 ntBASIC-3.82□□□□□ -3.02
SCAPERQ9BY12 Y_RNA.259-201ENST00000364619 101 ntBASIC-3.82□□□□□ -3.02
SCAPERQ9BY12 RNU6-275P-201ENST00000364910 107 ntBASIC-3.82□□□□□ -3.02
SCAPERQ9BY12 Y_RNA.325-201ENST00000365171 122 ntBASIC-3.82□□□□□ -3.02
SCAPERQ9BY12 RNU6-1113P-201ENST00000384348 107 ntBASIC-3.82□□□□□ -3.02
SCAPERQ9BY12 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-3.82□□□□□ -3.02
SCAPERQ9BY12 RNU6-770P-201ENST00000363929 105 ntBASIC-3.83□□□□□ -3.02
SCAPERQ9BY12 RNU6-816P-201ENST00000390914 107 ntBASIC-3.83□□□□□ -3.02
SCAPERQ9BY12 RNU6-1268P-201ENST00000391214 107 ntBASIC-3.83□□□□□ -3.02
SCAPERQ9BY12 RNU6-1239P-201ENST00000391310 107 ntBASIC-3.83□□□□□ -3.02
SCAPERQ9BY12 RNY3P15-201ENST00000516297 97 ntBASIC-3.83□□□□□ -3.02
SCAPERQ9BY12 MIR4439-201ENST00000583746 80 ntBASIC-3.83□□□□□ -3.02
SCAPERQ9BY12 AC113139.1-201ENST00000605049 239 ntBASIC-3.83□□□□□ -3.02
SCAPERQ9BY12 Y_RNA.686-201ENST00000516548 134 ntBASIC-3.84□□□□□ -3.02
SCAPERQ9BY12 Y_RNA.398-201ENST00000383952 99 ntBASIC-3.85□□□□□ -3.03
SCAPERQ9BY12 RNA5SP136-201ENST00000410906 107 ntBASIC-3.85□□□□□ -3.03
SCAPERQ9BY12 MTND4LP32-201ENST00000636111 270 ntBASIC-3.85□□□□□ -3.03
SCAPERQ9BY12 Y_RNA.84-201ENST00000363011 104 ntBASIC-3.86□□□□□ -3.03
SCAPERQ9BY12 Y_RNA.187-201ENST00000363918 113 ntBASIC-3.86□□□□□ -3.03
SCAPERQ9BY12 MIR3144-201ENST00000579460 79 ntBASIC-3.86□□□□□ -3.03
SCAPERQ9BY12 RNU6-834P-201ENST00000362367 110 ntBASIC-3.87□□□□□ -3.03
SCAPERQ9BY12 MIR577-201ENST00000385196 96 ntBASIC-3.87□□□□□ -3.03
SCAPERQ9BY12 RNU6-587P-201ENST00000391282 106 ntBASIC-3.87□□□□□ -3.03
SCAPERQ9BY12 RNU7-174P-201ENST00000516248 59 ntBASIC-3.87□□□□□ -3.03
SCAPERQ9BY12 RNU6-340P-201ENST00000364005 107 ntBASIC-3.88□□□□□ -3.03
SCAPERQ9BY12 MIR1252-201ENST00000408861 65 ntBASIC-3.88□□□□□ -3.03
SCAPERQ9BY12 Y_RNA.657-201ENST00000515983 102 ntBASIC-3.88□□□□□ -3.03
SCAPERQ9BY12 Y_RNA.19-201ENST00000362462 99 ntBASIC-3.89□□□□□ -3.03
SCAPERQ9BY12 RNU6-912P-201ENST00000363800 104 ntBASIC-3.89□□□□□ -3.03
SCAPERQ9BY12 Y_RNA.337-201ENST00000365312 102 ntBASIC-3.89□□□□□ -3.03
SCAPERQ9BY12 SNORD116-29-201ENST00000384516 83 ntBASIC-3.89□□□□□ -3.03
SCAPERQ9BY12 Y_RNA.554-201ENST00000384672 102 ntBASIC-3.89□□□□□ -3.03
SCAPERQ9BY12 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-3.89□□□□□ -3.03
SCAPERQ9BY12 RNU6-645P-201ENST00000364649 106 ntBASIC-3.9□□□□□ -3.03
SCAPERQ9BY12 RNU6-106P-201ENST00000384405 107 ntBASIC-3.9□□□□□ -3.03
SCAPERQ9BY12 RNU6-1081P-201ENST00000384537 107 ntBASIC-3.9□□□□□ -3.03
SCAPERQ9BY12 Y_RNA.718-201ENST00000517110 102 ntBASIC-3.9□□□□□ -3.03
SCAPERQ9BY12 MIR369-201ENST00000362155 70 ntBASIC-3.91□□□□□ -3.04
SCAPERQ9BY12 SNORD60-201ENST00000383903 83 ntBASIC-3.91□□□□□ -3.04
SCAPERQ9BY12 Y_RNA.395-201ENST00000383945 109 ntBASIC-3.91□□□□□ -3.04
SCAPERQ9BY12 MIR4694-201ENST00000578534 80 ntBASIC-3.91□□□□□ -3.04
SCAPERQ9BY12 AC103810.7-201ENST00000607821 91 ntBASIC-3.91□□□□□ -3.04
SCAPERQ9BY12 Y_RNA.467-201ENST00000384297 102 ntBASIC-3.92□□□□□ -3.04
SCAPERQ9BY12 Y_RNA.612-201ENST00000410717 95 ntBASIC-3.92□□□□□ -3.04
SCAPERQ9BY12 RNU6-681P-201ENST00000364012 104 ntBASIC-3.93□□□□□ -3.04
SCAPERQ9BY12 RNU6-813P-201ENST00000384691 107 ntBASIC-3.93□□□□□ -3.04
SCAPERQ9BY12 RNU6-1143P-201ENST00000516125 104 ntBASIC-3.93□□□□□ -3.04
SCAPERQ9BY12 RNY3P16-201ENST00000516338 101 ntBASIC-3.93□□□□□ -3.04
SCAPERQ9BY12 U2.14-201ENST00000615943 113 ntBASIC-3.93□□□□□ -3.04
SCAPERQ9BY12 SNORD114-13-201ENST00000364377 74 ntBASIC-3.94□□□□□ -3.04
SCAPERQ9BY12 RNU6-669P-201ENST00000365575 107 ntBASIC-3.94□□□□□ -3.04
SCAPERQ9BY12 RNU2-16P-201ENST00000410712 136 ntBASIC-3.94□□□□□ -3.04
SCAPERQ9BY12 SNORD63.2-201ENST00000516303 64 ntBASIC-3.94□□□□□ -3.04
SCAPERQ9BY12 RNU6-806P-201ENST00000365147 105 ntBASIC-3.95□□□□□ -3.04
SCAPERQ9BY12 RNU6-823P-201ENST00000391042 103 ntBASIC-3.95□□□□□ -3.04
SCAPERQ9BY12 RNU7-152P-201ENST00000458982 64 ntBASIC-3.95□□□□□ -3.04
Retrieved 100 of 98,524 protein–RNA pairs in 347.8 ms