Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 MIR214-201ENST00000385214 110 ntBASIC-0.15□□□□□ -2.43
RSPO3Q9BXY4 SNORD75.2-201ENST00000408784 58 ntBASIC-0.15□□□□□ -2.43
RSPO3Q9BXY4 RNA5SP89-201ENST00000410300 108 ntBASIC-0.15□□□□□ -2.43
RSPO3Q9BXY4 RNU6-402P-201ENST00000410678 103 ntBASIC-0.15□□□□□ -2.43
RSPO3Q9BXY4 RNU6-168P-201ENST00000516189 101 ntBASIC-0.15□□□□□ -2.43
RSPO3Q9BXY4 RNU6-153P-201ENST00000364422 104 ntBASIC-0.16□□□□□ -2.44
RSPO3Q9BXY4 SNORD49B-201ENST00000365172 72 ntBASIC-0.16□□□□□ -2.44
RSPO3Q9BXY4 RNU6-49P-201ENST00000384256 107 ntBASIC-0.16□□□□□ -2.44
RSPO3Q9BXY4 MIR9-2-201ENST00000384838 87 ntBASIC-0.16□□□□□ -2.44
RSPO3Q9BXY4 MIR519C-201ENST00000385053 87 ntBASIC-0.16□□□□□ -2.44
RSPO3Q9BXY4 AC104692.1-201ENST00000472406 90 ntBASIC-0.16□□□□□ -2.44
RSPO3Q9BXY4 SNORA18.1-201ENST00000363418 128 ntBASIC-0.17□□□□□ -2.44
RSPO3Q9BXY4 SNORD114-4-201ENST00000363962 75 ntBASIC-0.17□□□□□ -2.44
RSPO3Q9BXY4 AP000676.1-201ENST00000533307 52 ntBASIC-0.17□□□□□ -2.44
RSPO3Q9BXY4 SNORD116-22-201ENST00000384430 92 ntBASIC-0.18□□□□□ -2.44
RSPO3Q9BXY4 snoU13.13-201ENST00000458842 104 ntBASIC-0.18□□□□□ -2.44
RSPO3Q9BXY4 SNORD4A-201ENST00000459174 72 ntBASIC-0.18□□□□□ -2.44
RSPO3Q9BXY4 AL590491.3-201ENST00000610731 82 ntBASIC-0.18□□□□□ -2.44
RSPO3Q9BXY4 U6.81-201ENST00000612550 106 ntBASIC-0.18□□□□□ -2.44
RSPO3Q9BXY4 MIR1295B-201ENST00000636144 60 ntBASIC-0.18□□□□□ -2.44
RSPO3Q9BXY4 MIR4773-1-201ENST00000637203 78 ntBASIC-0.18□□□□□ -2.44
RSPO3Q9BXY4 RNU6-502P-201ENST00000362419 108 ntBASIC-0.19□□□□□ -2.44
RSPO3Q9BXY4 RNU5F-1-201ENST00000362507 117 ntBASIC-0.19□□□□□ -2.44
RSPO3Q9BXY4 SNORD115-25-201ENST00000362619 82 ntBASIC-0.19□□□□□ -2.44
RSPO3Q9BXY4 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.19□□□□□ -2.44
RSPO3Q9BXY4 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.19□□□□□ -2.44
RSPO3Q9BXY4 RNU6-455P-201ENST00000384681 107 ntBASIC-0.19□□□□□ -2.44
RSPO3Q9BXY4 MIR203A-201ENST00000384836 110 ntBASIC-0.19□□□□□ -2.44
RSPO3Q9BXY4 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.19□□□□□ -2.44
RSPO3Q9BXY4 MIR548BB-201ENST00000626714 66 ntBASIC-0.19□□□□□ -2.44
RSPO3Q9BXY4 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.19□□□□□ -2.44
RSPO3Q9BXY4 RNU6-260P-201ENST00000384092 107 ntBASIC-0.2□□□□□ -2.44
RSPO3Q9BXY4 RNU6-337P-201ENST00000391243 106 ntBASIC-0.2□□□□□ -2.44
RSPO3Q9BXY4 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.2□□□□□ -2.44
RSPO3Q9BXY4 AC093729.1-201ENST00000513074 128 ntBASIC-0.2□□□□□ -2.44
RSPO3Q9BXY4 RNU6-844P-201ENST00000517175 102 ntBASIC-0.2□□□□□ -2.44
RSPO3Q9BXY4 AC006254.2-201ENST00000603259 279 ntBASIC-0.2□□□□□ -2.44
RSPO3Q9BXY4 AC108676.2-201ENST00000605225 163 ntBASIC-0.2□□□□□ -2.44
RSPO3Q9BXY4 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.2□□□□□ -2.44
RSPO3Q9BXY4 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.21□□□□□ -2.44
RSPO3Q9BXY4 Y_RNA.81-201ENST00000362997 102 ntBASIC-0.21□□□□□ -2.44
RSPO3Q9BXY4 RNU6-624P-201ENST00000363411 107 ntBASIC-0.21□□□□□ -2.44
RSPO3Q9BXY4 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.21□□□□□ -2.44
RSPO3Q9BXY4 RNU6-675P-201ENST00000384236 104 ntBASIC-0.21□□□□□ -2.44
RSPO3Q9BXY4 RNU6-900P-201ENST00000384498 102 ntBASIC-0.21□□□□□ -2.44
RSPO3Q9BXY4 RNA5SP300-201ENST00000391197 107 ntBASIC-0.21□□□□□ -2.44
RSPO3Q9BXY4 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.21□□□□□ -2.44
RSPO3Q9BXY4 AC140658.3-201ENST00000567603 271 ntBASIC-0.21□□□□□ -2.44
RSPO3Q9BXY4 AC090617.8-201ENST00000623339 167 ntBASIC-0.21□□□□□ -2.44
RSPO3Q9BXY4 MIR101-1-201ENST00000362265 75 ntBASIC-0.22□□□□□ -2.44
RSPO3Q9BXY4 RNU6-208P-201ENST00000362431 107 ntBASIC-0.22□□□□□ -2.44
RSPO3Q9BXY4 RNU6-340P-201ENST00000364005 107 ntBASIC-0.22□□□□□ -2.44
RSPO3Q9BXY4 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.22□□□□□ -2.44
RSPO3Q9BXY4 RNA5SP368-201ENST00000364298 116 ntBASIC-0.22□□□□□ -2.44
RSPO3Q9BXY4 SNORA63.6-201ENST00000364921 119 ntBASIC-0.22□□□□□ -2.44
RSPO3Q9BXY4 SNORD56B-201ENST00000384713 71 ntBASIC-0.22□□□□□ -2.44
RSPO3Q9BXY4 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.22□□□□□ -2.44
RSPO3Q9BXY4 RNA5SP451-201ENST00000410588 110 ntBASIC-0.22□□□□□ -2.44
RSPO3Q9BXY4 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.22□□□□□ -2.44
RSPO3Q9BXY4 AL450471.1-201ENST00000447509 127 ntBASIC-0.22□□□□□ -2.44
RSPO3Q9BXY4 RNU7-55P-201ENST00000459426 62 ntBASIC-0.22□□□□□ -2.44
RSPO3Q9BXY4 RNA5SP147-201ENST00000516493 109 ntBASIC-0.22□□□□□ -2.44
RSPO3Q9BXY4 MIR3657-201ENST00000584818 117 ntBASIC-0.22□□□□□ -2.44
RSPO3Q9BXY4 MIR3666-201ENST00000607845 111 ntBASIC-0.22□□□□□ -2.44
RSPO3Q9BXY4 MIR6509-201ENST00000614603 85 ntBASIC-0.22□□□□□ -2.44
RSPO3Q9BXY4 SNORD114-28-201ENST00000363610 72 ntBASIC-0.23□□□□□ -2.45
RSPO3Q9BXY4 SNORD77.2-201ENST00000391045 68 ntBASIC-0.23□□□□□ -2.45
RSPO3Q9BXY4 RNU6-592P-201ENST00000411333 103 ntBASIC-0.23□□□□□ -2.45
RSPO3Q9BXY4 MIR4280-201ENST00000582178 76 ntBASIC-0.23□□□□□ -2.45
RSPO3Q9BXY4 MIR6773-201ENST00000612812 74 ntBASIC-0.23□□□□□ -2.45
RSPO3Q9BXY4 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.23□□□□□ -2.45
RSPO3Q9BXY4 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.24□□□□□ -2.45
RSPO3Q9BXY4 SNORD114-11-201ENST00000363738 75 ntBASIC-0.24□□□□□ -2.45
RSPO3Q9BXY4 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.24□□□□□ -2.45
RSPO3Q9BXY4 RNY4P30-201ENST00000410216 95 ntBASIC-0.24□□□□□ -2.45
RSPO3Q9BXY4 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.24□□□□□ -2.45
RSPO3Q9BXY4 RPS29P8-201ENST00000445109 171 ntBASIC-0.24□□□□□ -2.45
RSPO3Q9BXY4 AL691482.2-201ENST00000457453 84 ntBASIC-0.24□□□□□ -2.45
RSPO3Q9BXY4 AC021146.9-201ENST00000512503 156 ntBASIC-0.24□□□□□ -2.45
RSPO3Q9BXY4 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.24□□□□□ -2.45
RSPO3Q9BXY4 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.24□□□□□ -2.45
RSPO3Q9BXY4 uc_338.36-201ENST00000622331 158 ntBASIC-0.24□□□□□ -2.45
RSPO3Q9BXY4 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.25□□□□□ -2.45
RSPO3Q9BXY4 RNU6-478P-201ENST00000363904 110 ntBASIC-0.25□□□□□ -2.45
RSPO3Q9BXY4 SNORD95.1-201ENST00000364099 68 ntBASIC-0.25□□□□□ -2.45
RSPO3Q9BXY4 SNORD2-201ENST00000459163 69 ntBASIC-0.25□□□□□ -2.45
RSPO3Q9BXY4 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.25□□□□□ -2.45
RSPO3Q9BXY4 AC006160.2-201ENST00000637708 154 ntBASIC-0.25□□□□□ -2.45
RSPO3Q9BXY4 MIR4788-201ENST00000639104 80 ntBASIC-0.25□□□□□ -2.45
RSPO3Q9BXY4 SNORD115-37-201ENST00000363768 82 ntBASIC-0.26□□□□□ -2.45
RSPO3Q9BXY4 RNU6-30P-201ENST00000384561 107 ntBASIC-0.26□□□□□ -2.45
RSPO3Q9BXY4 MIRLET7B-201ENST00000385140 83 ntBASIC-0.26□□□□□ -2.45
RSPO3Q9BXY4 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.26□□□□□ -2.45
RSPO3Q9BXY4 RNU6-274P-201ENST00000459566 107 ntBASIC-0.26□□□□□ -2.45
RSPO3Q9BXY4 YWHAEP3-201ENST00000582767 121 ntBASIC-0.26□□□□□ -2.45
RSPO3Q9BXY4 MIR5704-201ENST00000584029 77 ntBASIC-0.26□□□□□ -2.45
RSPO3Q9BXY4 MIR8064-201ENST00000612863 90 ntBASIC-0.26□□□□□ -2.45
RSPO3Q9BXY4 RNU6-330P-201ENST00000363015 107 ntBASIC-0.27□□□□□ -2.45
RSPO3Q9BXY4 SNORA2.1-201ENST00000363089 137 ntBASIC-0.27□□□□□ -2.45
RSPO3Q9BXY4 SNORA33.1-201ENST00000364957 130 ntBASIC-0.27□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 235.7 ms