Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 MIR203A-201ENST00000384836 110 ntBASIC-0.57□□□□□ -2.5
SCN2AQ99250 RNU6-284P-201ENST00000411105 106 ntBASIC-0.57□□□□□ -2.5
SCN2AQ99250 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.57□□□□□ -2.5
SCN2AQ99250 RNU4-32P-201ENST00000363404 141 ntBASIC-0.57□□□□□ -2.5
SCN2AQ99250 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.57□□□□□ -2.5
SCN2AQ99250 SNORD75.1-201ENST00000408373 60 ntBASIC-0.57□□□□□ -2.5
SCN2AQ99250 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.57□□□□□ -2.5
SCN2AQ99250 snoU13.13-201ENST00000458842 104 ntBASIC-0.57□□□□□ -2.5
SCN2AQ99250 SNORD22.1-201ENST00000516331 125 ntBASIC-0.57□□□□□ -2.5
SCN2AQ99250 SNORA18.5-201ENST00000516616 101 ntBASIC-0.57□□□□□ -2.5
SCN2AQ99250 AC012531.4-201ENST00000616509 177 ntBASIC-0.57□□□□□ -2.5
SCN2AQ99250 SNORA63.6-201ENST00000364921 119 ntBASIC-0.58□□□□□ -2.5
SCN2AQ99250 MIR582-201ENST00000365731 98 ntBASIC-0.58□□□□□ -2.5
SCN2AQ99250 MIR590-201ENST00000385008 97 ntBASIC-0.58□□□□□ -2.5
SCN2AQ99250 YWHAEP3-201ENST00000582767 121 ntBASIC-0.58□□□□□ -2.5
SCN2AQ99250 RNU6-624P-201ENST00000363411 107 ntBASIC-0.59□□□□□ -2.5
SCN2AQ99250 RNU6-260P-201ENST00000384092 107 ntBASIC-0.59□□□□□ -2.5
SCN2AQ99250 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.59□□□□□ -2.5
SCN2AQ99250 SNORA19-201ENST00000384737 128 ntBASIC-0.59□□□□□ -2.5
SCN2AQ99250 RNU6-337P-201ENST00000391243 106 ntBASIC-0.59□□□□□ -2.5
SCN2AQ99250 SNORD115-25-201ENST00000362619 82 ntBASIC-0.59□□□□□ -2.5
SCN2AQ99250 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.59□□□□□ -2.5
SCN2AQ99250 SNORA24B-201ENST00000384176 131 ntBASIC-0.59□□□□□ -2.5
SCN2AQ99250 MTATP8P2-201ENST00000435212 202 ntBASIC-0.59□□□□□ -2.5
SCN2AQ99250 SNORA40.13-201ENST00000516379 120 ntBASIC-0.59□□□□□ -2.5
SCN2AQ99250 RNU6-766P-201ENST00000362478 107 ntBASIC-0.6□□□□□ -2.51
SCN2AQ99250 SNORD115-23-201ENST00000364461 82 ntBASIC-0.6□□□□□ -2.51
SCN2AQ99250 SNORA3B-201ENST00000391305 131 ntBASIC-0.6□□□□□ -2.51
SCN2AQ99250 RNA5SP67-201ENST00000516422 131 ntBASIC-0.6□□□□□ -2.51
SCN2AQ99250 U7.3-201ENST00000616123 62 ntBASIC-0.6□□□□□ -2.51
SCN2AQ99250 AC132825.6-201ENST00000638861 357 ntBASIC-0.6□□□□□ -2.51
SCN2AQ99250 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.6□□□□□ -2.51
SCN2AQ99250 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.6□□□□□ -2.51
SCN2AQ99250 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.61□□□□□ -2.51
SCN2AQ99250 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.62□□□□□ -2.51
SCN2AQ99250 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.62□□□□□ -2.51
SCN2AQ99250 SNORD57-201ENST00000448188 72 ntBASIC-0.62□□□□□ -2.51
SCN2AQ99250 AC021146.6-201ENST00000514659 117 ntBASIC-0.62□□□□□ -2.51
SCN2AQ99250 MIR3179-1-201ENST00000578940 84 ntBASIC-0.62□□□□□ -2.51
SCN2AQ99250 MIR3179-2-201ENST00000579107 84 ntBASIC-0.62□□□□□ -2.51
SCN2AQ99250 MIR3179-3-201ENST00000579566 84 ntBASIC-0.62□□□□□ -2.51
SCN2AQ99250 MIR3179-4-201ENST00000617599 84 ntBASIC-0.62□□□□□ -2.51
SCN2AQ99250 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.62□□□□□ -2.51
SCN2AQ99250 MIR601-201ENST00000385256 79 ntBASIC-0.62□□□□□ -2.51
SCN2AQ99250 MIR1236-201ENST00000408340 102 ntBASIC-0.62□□□□□ -2.51
SCN2AQ99250 FGF7P7-201ENST00000514120 227 ntBASIC-0.62□□□□□ -2.51
SCN2AQ99250 AC145423.2-201ENST00000610631 239 ntBASIC-0.62□□□□□ -2.51
SCN2AQ99250 AP001318.4-201ENST00000616637 121 ntBASIC-0.62□□□□□ -2.51
SCN2AQ99250 MIR8068-201ENST00000618032 68 ntBASIC-0.62□□□□□ -2.51
SCN2AQ99250 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.63□□□□□ -2.51
SCN2AQ99250 AC021146.9-201ENST00000512503 156 ntBASIC-0.63□□□□□ -2.51
SCN2AQ99250 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.63□□□□□ -2.51
SCN2AQ99250 RNY1P9-201ENST00000532431 109 ntBASIC-0.63□□□□□ -2.51
SCN2AQ99250 SNORD115-27-201ENST00000364430 82 ntBASIC-0.64□□□□□ -2.51
SCN2AQ99250 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.64□□□□□ -2.51
SCN2AQ99250 AC104996.3-201ENST00000590718 94 ntBASIC-0.64□□□□□ -2.51
SCN2AQ99250 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.64□□□□□ -2.51
SCN2AQ99250 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.64□□□□□ -2.51
SCN2AQ99250 RNU6-158P-201ENST00000517104 100 ntBASIC-0.64□□□□□ -2.51
SCN2AQ99250 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.65□□□□□ -2.51
SCN2AQ99250 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.65□□□□□ -2.51
SCN2AQ99250 AL035461.1-201ENST00000421490 332 ntBASIC-0.65□□□□□ -2.51
SCN2AQ99250 AL031737.1-201ENST00000450125 223 ntBASIC-0.65□□□□□ -2.51
SCN2AQ99250 AC006254.2-201ENST00000603259 279 ntBASIC-0.65□□□□□ -2.51
SCN2AQ99250 MIR204-201ENST00000385200 110 ntBASIC-0.65□□□□□ -2.51
SCN2AQ99250 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.65□□□□□ -2.51
SCN2AQ99250 RNU7-154P-201ENST00000516194 62 ntBASIC-0.65□□□□□ -2.51
SCN2AQ99250 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.65□□□□□ -2.51
SCN2AQ99250 MIR198-201ENST00000637333 62 ntBASIC-0.65□□□□□ -2.51
SCN2AQ99250 RNU6-208P-201ENST00000362431 107 ntBASIC-0.66□□□□□ -2.52
SCN2AQ99250 RNU6-973P-201ENST00000364690 107 ntBASIC-0.66□□□□□ -2.52
SCN2AQ99250 RNU6-81P-201ENST00000365608 104 ntBASIC-0.66□□□□□ -2.52
SCN2AQ99250 SNORD116-22-201ENST00000384430 92 ntBASIC-0.66□□□□□ -2.52
SCN2AQ99250 MIR196A1-201ENST00000388006 70 ntBASIC-0.66□□□□□ -2.52
SCN2AQ99250 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.66□□□□□ -2.52
SCN2AQ99250 RNU6-479P-201ENST00000516348 105 ntBASIC-0.66□□□□□ -2.52
SCN2AQ99250 RNA5SP147-201ENST00000516493 109 ntBASIC-0.66□□□□□ -2.52
SCN2AQ99250 AL365222.1-201ENST00000614661 98 ntBASIC-0.66□□□□□ -2.52
SCN2AQ99250 MIR450A1-201ENST00000362262 91 ntBASIC-0.67□□□□□ -2.52
SCN2AQ99250 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.67□□□□□ -2.52
SCN2AQ99250 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.67□□□□□ -2.52
SCN2AQ99250 RNU6-382P-201ENST00000365181 106 ntBASIC-0.67□□□□□ -2.52
SCN2AQ99250 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.67□□□□□ -2.52
SCN2AQ99250 RNU6-752P-201ENST00000516376 102 ntBASIC-0.67□□□□□ -2.52
SCN2AQ99250 SNORD38.3-201ENST00000516599 73 ntBASIC-0.67□□□□□ -2.52
SCN2AQ99250 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.67□□□□□ -2.52
SCN2AQ99250 RNU6-834P-201ENST00000362367 110 ntBASIC-0.67□□□□□ -2.52
SCN2AQ99250 RNU6-824P-201ENST00000363724 104 ntBASIC-0.67□□□□□ -2.52
SCN2AQ99250 MIR4773-1-201ENST00000637203 78 ntBASIC-0.67□□□□□ -2.52
SCN2AQ99250 AC006160.2-201ENST00000637708 154 ntBASIC-0.67□□□□□ -2.52
SCN2AQ99250 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.68□□□□□ -2.52
SCN2AQ99250 MIR518B-201ENST00000385127 83 ntBASIC-0.68□□□□□ -2.52
SCN2AQ99250 CYP3A54P-201ENST00000566950 75 ntBASIC-0.69□□□□□ -2.52
SCN2AQ99250 MIR5704-201ENST00000584029 77 ntBASIC-0.69□□□□□ -2.52
SCN2AQ99250 AC090617.8-201ENST00000623339 167 ntBASIC-0.69□□□□□ -2.52
SCN2AQ99250 RNU6-990P-201ENST00000364385 104 ntBASIC-0.69□□□□□ -2.52
SCN2AQ99250 AL445193.1-201ENST00000441183 141 ntBASIC-0.69□□□□□ -2.52
SCN2AQ99250 MIR521-2-201ENST00000384818 87 ntBASIC-0.7□□□□□ -2.52
SCN2AQ99250 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.7□□□□□ -2.52
SCN2AQ99250 RNU6-592P-201ENST00000411333 103 ntBASIC-0.7□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms