Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 SNORD71-201ENST00000411292 86 ntBASIC1.11□□□□□ -2.23
CCDC85AQ96PX6 SNORA70.25-201ENST00000612741 95 ntBASIC1.11□□□□□ -2.23
CCDC85AQ96PX6 MIR6779-201ENST00000617283 64 ntBASIC1.11□□□□□ -2.23
CCDC85AQ96PX6 SNORA40.8-201ENST00000411034 126 ntBASIC1.1□□□□□ -2.23
CCDC85AQ96PX6 CYP3A137P-201ENST00000562436 69 ntBASIC1.1□□□□□ -2.23
CCDC85AQ96PX6 MIR548AE1-201ENST00000583292 70 ntBASIC1.1□□□□□ -2.23
CCDC85AQ96PX6 SNORD118-201ENST00000363593 134 ntBASIC1.09□□□□□ -2.23
CCDC85AQ96PX6 Y_RNA.633-201ENST00000459107 95 ntBASIC1.09□□□□□ -2.23
CCDC85AQ96PX6 RPL39P28-201ENST00000465655 155 ntBASIC1.09□□□□□ -2.23
CCDC85AQ96PX6 RNA5SP325-201ENST00000363756 130 ntBASIC1.08□□□□□ -2.24
CCDC85AQ96PX6 RNY1P8-201ENST00000383970 114 ntBASIC1.08□□□□□ -2.24
CCDC85AQ96PX6 MIR5000-201ENST00000577717 103 ntBASIC1.08□□□□□ -2.24
CCDC85AQ96PX6 MIR4752-201ENST00000579672 72 ntBASIC1.08□□□□□ -2.24
CCDC85AQ96PX6 MIR598-201ENST00000384868 97 ntBASIC1.07□□□□□ -2.24
CCDC85AQ96PX6 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.07□□□□□ -2.24
CCDC85AQ96PX6 AC069271.1-201ENST00000445577 156 ntBASIC1.07□□□□□ -2.24
CCDC85AQ96PX6 AL157398.1-201ENST00000452981 186 ntBASIC1.07□□□□□ -2.24
CCDC85AQ96PX6 snoU13.13-201ENST00000458842 104 ntBASIC1.07□□□□□ -2.24
CCDC85AQ96PX6 MIR6857-201ENST00000613267 93 ntBASIC1.07□□□□□ -2.24
CCDC85AQ96PX6 SNORA2A-201ENST00000383885 135 ntBASIC1.06□□□□□ -2.24
CCDC85AQ96PX6 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
CCDC85AQ96PX6 RNA5SP299-201ENST00000391203 116 ntBASIC1.06□□□□□ -2.24
CCDC85AQ96PX6 PSMC1P5-201ENST00000512850 177 ntBASIC1.06□□□□□ -2.24
CCDC85AQ96PX6 RNU6-848P-201ENST00000515948 107 ntBASIC1.06□□□□□ -2.24
CCDC85AQ96PX6 RNU6-617P-201ENST00000516147 107 ntBASIC1.06□□□□□ -2.24
CCDC85AQ96PX6 RNU6-473P-201ENST00000516164 107 ntBASIC1.06□□□□□ -2.24
CCDC85AQ96PX6 RNU6-1049P-201ENST00000516414 107 ntBASIC1.06□□□□□ -2.24
CCDC85AQ96PX6 SNORA25.18-201ENST00000607153 114 ntBASIC1.06□□□□□ -2.24
CCDC85AQ96PX6 Y_RNA.125-201ENST00000363371 111 ntBASIC1.05□□□□□ -2.24
CCDC85AQ96PX6 MIR548E-201ENST00000408287 88 ntBASIC1.05□□□□□ -2.24
CCDC85AQ96PX6 HMGN2P22-201ENST00000427588 175 ntBASIC1.05□□□□□ -2.24
CCDC85AQ96PX6 SNORD2-201ENST00000459163 69 ntBASIC1.05□□□□□ -2.24
CCDC85AQ96PX6 AC103810.9-201ENST00000606688 112 ntBASIC1.05□□□□□ -2.24
CCDC85AQ96PX6 MIR20A-201ENST00000362279 71 ntBASIC1.04□□□□□ -2.24
CCDC85AQ96PX6 AC244090.1-201ENST00000441884 93 ntBASIC1.04□□□□□ -2.24
CCDC85AQ96PX6 SCARNA21.1-201ENST00000515996 128 ntBASIC1.04□□□□□ -2.24
CCDC85AQ96PX6 MIR4714-201ENST00000580728 77 ntBASIC1.04□□□□□ -2.24
CCDC85AQ96PX6 AL590095.2-201ENST00000604136 117 ntBASIC1.04□□□□□ -2.24
CCDC85AQ96PX6 MIR548C-201ENST00000384815 97 ntBASIC1.03□□□□□ -2.24
CCDC85AQ96PX6 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.03□□□□□ -2.24
CCDC85AQ96PX6 RNU1-29P-201ENST00000606574 126 ntBASIC1.03□□□□□ -2.24
CCDC85AQ96PX6 SNORA25.5-201ENST00000363782 126 ntBASIC1.02□□□□□ -2.25
CCDC85AQ96PX6 RNU6-499P-201ENST00000365615 107 ntBASIC1.02□□□□□ -2.25
CCDC85AQ96PX6 MIR518A1-201ENST00000385068 85 ntBASIC1.02□□□□□ -2.25
CCDC85AQ96PX6 RNU6-229P-201ENST00000516614 102 ntBASIC1.02□□□□□ -2.25
CCDC85AQ96PX6 SNORA33.1-201ENST00000364957 130 ntBASIC1.01□□□□□ -2.25
CCDC85AQ96PX6 MIR582-201ENST00000365731 98 ntBASIC1.01□□□□□ -2.25
CCDC85AQ96PX6 SNORD114-29-201ENST00000364819 70 ntBASIC1□□□□□ -2.25
CCDC85AQ96PX6 MIR4653-201ENST00000585107 83 ntBASIC1□□□□□ -2.25
CCDC85AQ96PX6 RNU6-940P-201ENST00000363433 104 ntBASIC0.99□□□□□ -2.25
CCDC85AQ96PX6 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.98□□□□□ -2.25
CCDC85AQ96PX6 MIR517B-201ENST00000385102 67 ntBASIC0.98□□□□□ -2.25
CCDC85AQ96PX6 SNORD114-2-201ENST00000363953 78 ntBASIC0.97□□□□□ -2.25
CCDC85AQ96PX6 RNU6-863P-201ENST00000515989 104 ntBASIC0.97□□□□□ -2.25
CCDC85AQ96PX6 MIR548V-201ENST00000584165 80 ntBASIC0.97□□□□□ -2.25
CCDC85AQ96PX6 U2.7-201ENST00000619197 100 ntBASIC0.97□□□□□ -2.25
CCDC85AQ96PX6 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
CCDC85AQ96PX6 Y_RNA.423-201ENST00000384057 113 ntBASIC0.96□□□□□ -2.26
CCDC85AQ96PX6 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
CCDC85AQ96PX6 SNORD113-2-201ENST00000391082 72 ntBASIC0.96□□□□□ -2.26
CCDC85AQ96PX6 U6.96-201ENST00000636425 70 ntBASIC0.96□□□□□ -2.26
CCDC85AQ96PX6 RNU6-698P-201ENST00000363523 107 ntBASIC0.95□□□□□ -2.26
CCDC85AQ96PX6 RNU6-34P-201ENST00000364874 107 ntBASIC0.95□□□□□ -2.26
CCDC85AQ96PX6 MIR516B1-201ENST00000385211 90 ntBASIC0.95□□□□□ -2.26
CCDC85AQ96PX6 AC098934.3-201ENST00000430450 190 ntBASIC0.95□□□□□ -2.26
CCDC85AQ96PX6 RNU6-92P-201ENST00000605893 104 ntBASIC0.95□□□□□ -2.26
CCDC85AQ96PX6 MIR6835-201ENST00000621552 64 ntBASIC0.95□□□□□ -2.26
CCDC85AQ96PX6 MIR508-201ENST00000384857 115 ntBASIC0.94□□□□□ -2.26
CCDC85AQ96PX6 AC243829.6-201ENST00000612652 106 ntBASIC0.94□□□□□ -2.26
CCDC85AQ96PX6 RNA5SP192-201ENST00000364404 120 ntBASIC0.93□□□□□ -2.26
CCDC85AQ96PX6 RNU6-351P-201ENST00000516097 100 ntBASIC0.93□□□□□ -2.26
CCDC85AQ96PX6 RNU7-174P-201ENST00000516248 59 ntBASIC0.93□□□□□ -2.26
CCDC85AQ96PX6 MIR146A-201ENST00000385201 99 ntBASIC0.91□□□□□ -2.26
CCDC85AQ96PX6 MIR4677-201ENST00000584153 80 ntBASIC0.91□□□□□ -2.26
CCDC85AQ96PX6 MIR6866-201ENST00000638146 69 ntBASIC0.91□□□□□ -2.26
CCDC85AQ96PX6 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
CCDC85AQ96PX6 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.9□□□□□ -2.26
CCDC85AQ96PX6 MIR630-201ENST00000384957 97 ntBASIC0.9□□□□□ -2.27
CCDC85AQ96PX6 RNU4-54P-201ENST00000516428 129 ntBASIC0.9□□□□□ -2.27
CCDC85AQ96PX6 CYP3A54P-201ENST00000566950 75 ntBASIC0.9□□□□□ -2.27
CCDC85AQ96PX6 MIR466-201ENST00000580653 84 ntBASIC0.9□□□□□ -2.27
CCDC85AQ96PX6 MIR6755-201ENST00000619993 66 ntBASIC0.9□□□□□ -2.27
CCDC85AQ96PX6 MIR760-201ENST00000390220 80 ntBASIC0.89□□□□□ -2.27
CCDC85AQ96PX6 RNU7-188P-201ENST00000517063 64 ntBASIC0.89□□□□□ -2.27
CCDC85AQ96PX6 RN7SL793P-201ENST00000583259 296 ntBASIC0.89□□□□□ -2.27
CCDC85AQ96PX6 MIR548AD-201ENST00000584780 82 ntBASIC0.89□□□□□ -2.27
CCDC85AQ96PX6 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
CCDC85AQ96PX6 MTND4LP19-201ENST00000403051 166 ntBASIC0.88□□□□□ -2.27
CCDC85AQ96PX6 AL021921.1-201ENST00000442774 93 ntBASIC0.88□□□□□ -2.27
CCDC85AQ96PX6 RNU6-122P-201ENST00000516818 107 ntBASIC0.88□□□□□ -2.27
CCDC85AQ96PX6 AC084368.1-201ENST00000620935 65 ntBASIC0.88□□□□□ -2.27
CCDC85AQ96PX6 Y_RNA.374-201ENST00000365606 101 ntBASIC0.87□□□□□ -2.27
CCDC85AQ96PX6 MIR501-201ENST00000390204 84 ntBASIC0.87□□□□□ -2.27
CCDC85AQ96PX6 RNA5SP128-201ENST00000365305 116 ntBASIC0.86□□□□□ -2.27
CCDC85AQ96PX6 RNU6-1232P-201ENST00000516299 86 ntBASIC0.85□□□□□ -2.27
CCDC85AQ96PX6 MIR633-201ENST00000384821 98 ntBASIC0.84□□□□□ -2.27
CCDC85AQ96PX6 MIR216A-201ENST00000385063 110 ntBASIC0.84□□□□□ -2.27
CCDC85AQ96PX6 AC079150.2-201ENST00000443733 78 ntBASIC0.84□□□□□ -2.27
CCDC85AQ96PX6 AC243829.3-201ENST00000622177 108 ntBASIC0.84□□□□□ -2.27
CCDC85AQ96PX6 Y_RNA.246-201ENST00000364495 108 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms