Protein–RNA interactions for Protein: Q96PE6

ZIM3, Zinc finger imprinted 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3Q96PE6 MIR6514-201ENST00000622549 70 ntBASIC0.03□□□□□ -2.4
ZIM3Q96PE6 MIR20A-201ENST00000362279 71 ntBASIC0.02□□□□□ -2.41
ZIM3Q96PE6 RNU6-315P-201ENST00000362666 107 ntBASIC0.02□□□□□ -2.41
ZIM3Q96PE6 RNU6-228P-201ENST00000362700 106 ntBASIC0.02□□□□□ -2.41
ZIM3Q96PE6 RNU6-652P-201ENST00000365488 107 ntBASIC0.02□□□□□ -2.41
ZIM3Q96PE6 MIR203A-201ENST00000384836 110 ntBASIC0.02□□□□□ -2.41
ZIM3Q96PE6 RNU6-337P-201ENST00000391243 106 ntBASIC0.02□□□□□ -2.41
ZIM3Q96PE6 SCARNA18B-201ENST00000458806 135 ntBASIC0.02□□□□□ -2.41
ZIM3Q96PE6 MIR6718-201ENST00000616153 80 ntBASIC0.02□□□□□ -2.41
ZIM3Q96PE6 AC090617.8-201ENST00000623339 167 ntBASIC0.02□□□□□ -2.41
ZIM3Q96PE6 MIR1245B-201ENST00000636115 69 ntBASIC0.02□□□□□ -2.41
ZIM3Q96PE6 Y_RNA.36-201ENST00000362602 112 ntBASIC0.01□□□□□ -2.41
ZIM3Q96PE6 SNORD114-16-201ENST00000363044 70 ntBASIC0.01□□□□□ -2.41
ZIM3Q96PE6 Y_RNA.264-201ENST00000364665 102 ntBASIC0.01□□□□□ -2.41
ZIM3Q96PE6 RNU6-1036P-201ENST00000383959 104 ntBASIC0.01□□□□□ -2.41
ZIM3Q96PE6 RNU6-929P-201ENST00000384429 107 ntBASIC0.01□□□□□ -2.41
ZIM3Q96PE6 MIR1302-4-201ENST00000408701 150 ntBASIC0.01□□□□□ -2.41
ZIM3Q96PE6 snoU13.13-201ENST00000458842 104 ntBASIC0.01□□□□□ -2.41
ZIM3Q96PE6 RNU6-303P-201ENST00000517091 106 ntBASIC0.01□□□□□ -2.41
ZIM3Q96PE6 CR383656.4-201ENST00000546909 122 ntBASIC0.01□□□□□ -2.41
ZIM3Q96PE6 MIR148A-201ENST00000362215 68 ntBASIC0□□□□□ -2.41
ZIM3Q96PE6 SNORA63.6-201ENST00000364921 119 ntBASIC0□□□□□ -2.41
ZIM3Q96PE6 RNU6-260P-201ENST00000384092 107 ntBASIC0□□□□□ -2.41
ZIM3Q96PE6 MIR610-201ENST00000385139 96 ntBASIC0□□□□□ -2.41
ZIM3Q96PE6 SNORA26.2-201ENST00000390922 122 ntBASIC0□□□□□ -2.41
ZIM3Q96PE6 AC244250.2-201ENST00000418731 148 ntBASIC0□□□□□ -2.41
ZIM3Q96PE6 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0□□□□□ -2.41
ZIM3Q96PE6 MIR4667-201ENST00000578933 66 ntBASIC0□□□□□ -2.41
ZIM3Q96PE6 MIR6509-201ENST00000614603 85 ntBASIC0□□□□□ -2.41
ZIM3Q96PE6 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0□□□□□ -2.41
ZIM3Q96PE6 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0□□□□□ -2.41
ZIM3Q96PE6 RNU6-502P-201ENST00000362419 108 ntBASIC-0.01□□□□□ -2.41
ZIM3Q96PE6 SNORA2.1-201ENST00000363089 137 ntBASIC-0.01□□□□□ -2.41
ZIM3Q96PE6 SNORD114-4-201ENST00000363962 75 ntBASIC-0.01□□□□□ -2.41
ZIM3Q96PE6 MIR598-201ENST00000384868 97 ntBASIC-0.01□□□□□ -2.41
ZIM3Q96PE6 RNU6-274P-201ENST00000459566 107 ntBASIC-0.01□□□□□ -2.41
ZIM3Q96PE6 SNORA62.5-201ENST00000516634 120 ntBASIC-0.01□□□□□ -2.41
ZIM3Q96PE6 MIR4514-201ENST00000581410 57 ntBASIC-0.01□□□□□ -2.41
ZIM3Q96PE6 AC010487.4-201ENST00000637027 61 ntBASIC-0.01□□□□□ -2.41
ZIM3Q96PE6 MIR9-2-201ENST00000384838 87 ntBASIC-0.02□□□□□ -2.41
ZIM3Q96PE6 RNU6-752P-201ENST00000516376 102 ntBASIC-0.02□□□□□ -2.41
ZIM3Q96PE6 RNA5SP147-201ENST00000516493 109 ntBASIC-0.02□□□□□ -2.41
ZIM3Q96PE6 MIR664A-201ENST00000626086 82 ntBASIC-0.02□□□□□ -2.41
ZIM3Q96PE6 RNU6-242P-201ENST00000384359 107 ntBASIC-0.03□□□□□ -2.41
ZIM3Q96PE6 MIR892B-201ENST00000401279 77 ntBASIC-0.03□□□□□ -2.41
ZIM3Q96PE6 AL691482.2-201ENST00000457453 84 ntBASIC-0.03□□□□□ -2.41
ZIM3Q96PE6 MIR4484-201ENST00000582855 83 ntBASIC-0.03□□□□□ -2.41
ZIM3Q96PE6 RNU7-159P-201ENST00000459284 62 ntBASIC-0.04□□□□□ -2.42
ZIM3Q96PE6 AC021146.9-201ENST00000512503 156 ntBASIC-0.04□□□□□ -2.42
ZIM3Q96PE6 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.04□□□□□ -2.42
ZIM3Q96PE6 AC023932.2-201ENST00000603176 175 ntBASIC-0.04□□□□□ -2.42
ZIM3Q96PE6 MIR6739-201ENST00000622461 75 ntBASIC-0.04□□□□□ -2.42
ZIM3Q96PE6 SNORD115-25-201ENST00000362619 82 ntBASIC-0.05□□□□□ -2.42
ZIM3Q96PE6 RNA5SP98-201ENST00000363158 137 ntBASIC-0.05□□□□□ -2.42
ZIM3Q96PE6 SNORA33.1-201ENST00000364957 130 ntBASIC-0.05□□□□□ -2.42
ZIM3Q96PE6 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.05□□□□□ -2.42
ZIM3Q96PE6 SNORA8.1-201ENST00000384250 140 ntBASIC-0.05□□□□□ -2.42
ZIM3Q96PE6 MIR1255A-201ENST00000408338 113 ntBASIC-0.05□□□□□ -2.42
ZIM3Q96PE6 MIR6773-201ENST00000612812 74 ntBASIC-0.05□□□□□ -2.42
ZIM3Q96PE6 MIR371B-201ENST00000638082 66 ntBASIC-0.05□□□□□ -2.42
ZIM3Q96PE6 RNU6-681P-201ENST00000364012 104 ntBASIC-0.06□□□□□ -2.42
ZIM3Q96PE6 MIR7-2-201ENST00000384970 110 ntBASIC-0.06□□□□□ -2.42
ZIM3Q96PE6 MIRLET7B-201ENST00000385140 83 ntBASIC-0.06□□□□□ -2.42
ZIM3Q96PE6 RNU6-279P-201ENST00000391297 101 ntBASIC-0.06□□□□□ -2.42
ZIM3Q96PE6 RNU7-55P-201ENST00000459426 62 ntBASIC-0.06□□□□□ -2.42
ZIM3Q96PE6 snoU13.18-201ENST00000459483 104 ntBASIC-0.06□□□□□ -2.42
ZIM3Q96PE6 RNU6-656P-201ENST00000516785 107 ntBASIC-0.06□□□□□ -2.42
ZIM3Q96PE6 RNU6-881P-201ENST00000516813 102 ntBASIC-0.06□□□□□ -2.42
ZIM3Q96PE6 MIR4768-201ENST00000585270 74 ntBASIC-0.06□□□□□ -2.42
ZIM3Q96PE6 SNORD114-26-201ENST00000363543 72 ntBASIC-0.07□□□□□ -2.42
ZIM3Q96PE6 SNORD115-22-201ENST00000364456 82 ntBASIC-0.07□□□□□ -2.42
ZIM3Q96PE6 SNORD115-23-201ENST00000364461 82 ntBASIC-0.07□□□□□ -2.42
ZIM3Q96PE6 SNORD78.1-201ENST00000390866 65 ntBASIC-0.07□□□□□ -2.42
ZIM3Q96PE6 RNA5SP225-201ENST00000410874 135 ntBASIC-0.07□□□□□ -2.42
ZIM3Q96PE6 RNU6-523P-201ENST00000516304 54 ntBASIC-0.07□□□□□ -2.42
ZIM3Q96PE6 AP000676.1-201ENST00000533307 52 ntBASIC-0.07□□□□□ -2.42
ZIM3Q96PE6 MIR3675-201ENST00000583661 73 ntBASIC-0.07□□□□□ -2.42
ZIM3Q96PE6 MIR3202-2-201ENST00000635980 79 ntBASIC-0.07□□□□□ -2.42
ZIM3Q96PE6 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.08□□□□□ -2.42
ZIM3Q96PE6 SNORD56B-201ENST00000384713 71 ntBASIC-0.08□□□□□ -2.42
ZIM3Q96PE6 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
ZIM3Q96PE6 MIR3134-201ENST00000579433 74 ntBASIC-0.08□□□□□ -2.42
ZIM3Q96PE6 RN7SL793P-201ENST00000583259 296 ntBASIC-0.08□□□□□ -2.42
ZIM3Q96PE6 AL590491.3-201ENST00000610731 82 ntBASIC-0.08□□□□□ -2.42
ZIM3Q96PE6 MIR521-2-201ENST00000384818 87 ntBASIC-0.09□□□□□ -2.42
ZIM3Q96PE6 RNU6-604P-201ENST00000390917 100 ntBASIC-0.09□□□□□ -2.42
ZIM3Q96PE6 RNU6-1275P-201ENST00000391087 107 ntBASIC-0.09□□□□□ -2.42
ZIM3Q96PE6 RNU6-857P-201ENST00000515893 110 ntBASIC-0.09□□□□□ -2.42
ZIM3Q96PE6 RNU6-982P-201ENST00000516216 102 ntBASIC-0.09□□□□□ -2.42
ZIM3Q96PE6 MIR1297-201ENST00000637311 77 ntBASIC-0.09□□□□□ -2.42
ZIM3Q96PE6 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.1□□□□□ -2.43
ZIM3Q96PE6 RNU6-302P-201ENST00000365249 107 ntBASIC-0.1□□□□□ -2.43
ZIM3Q96PE6 RNU6-46P-201ENST00000383860 107 ntBASIC-0.1□□□□□ -2.43
ZIM3Q96PE6 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.1□□□□□ -2.43
ZIM3Q96PE6 SNORD49B-201ENST00000365172 72 ntBASIC-0.11□□□□□ -2.43
ZIM3Q96PE6 RNU6-900P-201ENST00000384498 102 ntBASIC-0.11□□□□□ -2.43
ZIM3Q96PE6 RNU6-455P-201ENST00000384681 107 ntBASIC-0.11□□□□□ -2.43
ZIM3Q96PE6 SNORD2-201ENST00000459163 69 ntBASIC-0.11□□□□□ -2.43
ZIM3Q96PE6 RNU6-645P-201ENST00000364649 106 ntBASIC-0.12□□□□□ -2.43
ZIM3Q96PE6 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.12□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 169.3 ms