Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 SNORA25.18-201ENST00000607153 114 ntBASIC0.86□□□□□ -2.27
DDX11Q96FC9 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.86□□□□□ -2.27
DDX11Q96FC9 RNU6-668P-201ENST00000364180 107 ntBASIC0.84□□□□□ -2.27
DDX11Q96FC9 Y_RNA.375-201ENST00000365625 101 ntBASIC0.84□□□□□ -2.27
DDX11Q96FC9 MIR582-201ENST00000365731 98 ntBASIC0.84□□□□□ -2.27
DDX11Q96FC9 MIR652-201ENST00000385278 98 ntBASIC0.84□□□□□ -2.27
DDX11Q96FC9 AC069271.1-201ENST00000445577 156 ntBASIC0.84□□□□□ -2.27
DDX11Q96FC9 MIR4473-201ENST00000583731 91 ntBASIC0.84□□□□□ -2.27
DDX11Q96FC9 AL590095.2-201ENST00000604136 117 ntBASIC0.84□□□□□ -2.27
DDX11Q96FC9 MIR6739-201ENST00000622461 75 ntBASIC0.84□□□□□ -2.27
DDX11Q96FC9 SNORD110-201ENST00000408189 75 ntBASIC0.83□□□□□ -2.28
DDX11Q96FC9 AC006210.1-201ENST00000424882 111 ntBASIC0.83□□□□□ -2.28
DDX11Q96FC9 MTND4LP1-201ENST00000446263 157 ntBASIC0.83□□□□□ -2.28
DDX11Q96FC9 RNU4-54P-201ENST00000516428 129 ntBASIC0.83□□□□□ -2.28
DDX11Q96FC9 MIR6513-201ENST00000621188 64 ntBASIC0.83□□□□□ -2.28
DDX11Q96FC9 AC103706.3-201ENST00000636297 85 ntBASIC0.82□□□□□ -2.28
DDX11Q96FC9 SNORD118-201ENST00000363593 134 ntBASIC0.81□□□□□ -2.28
DDX11Q96FC9 Y_RNA.407-201ENST00000383986 113 ntBASIC0.81□□□□□ -2.28
DDX11Q96FC9 AC110620.1-201ENST00000416042 228 ntBASIC0.81□□□□□ -2.28
DDX11Q96FC9 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
DDX11Q96FC9 MIR548E-201ENST00000408287 88 ntBASIC0.8□□□□□ -2.28
DDX11Q96FC9 HMGN2P22-201ENST00000427588 175 ntBASIC0.8□□□□□ -2.28
DDX11Q96FC9 AL157398.1-201ENST00000452981 186 ntBASIC0.8□□□□□ -2.28
DDX11Q96FC9 SCARNA17.3-201ENST00000516381 125 ntBASIC0.8□□□□□ -2.28
DDX11Q96FC9 MIR5706-201ENST00000579841 80 ntBASIC0.8□□□□□ -2.28
DDX11Q96FC9 Y_RNA.250-201ENST00000364542 110 ntBASIC0.79□□□□□ -2.28
DDX11Q96FC9 Y_RNA.633-201ENST00000459107 95 ntBASIC0.79□□□□□ -2.28
DDX11Q96FC9 AC021146.9-201ENST00000512503 156 ntBASIC0.79□□□□□ -2.28
DDX11Q96FC9 RNU6-1232P-201ENST00000516299 86 ntBASIC0.79□□□□□ -2.28
DDX11Q96FC9 AC092634.7-201ENST00000621022 103 ntBASIC0.79□□□□□ -2.28
DDX11Q96FC9 RNU6-669P-201ENST00000365575 107 ntBASIC0.78□□□□□ -2.28
DDX11Q96FC9 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.78□□□□□ -2.28
DDX11Q96FC9 MIR936-201ENST00000401264 98 ntBASIC0.77□□□□□ -2.29
DDX11Q96FC9 SNORA40.8-201ENST00000411034 126 ntBASIC0.77□□□□□ -2.29
DDX11Q96FC9 RNU6-1089P-201ENST00000516473 104 ntBASIC0.77□□□□□ -2.29
DDX11Q96FC9 SNORA33.1-201ENST00000364957 130 ntBASIC0.76□□□□□ -2.29
DDX11Q96FC9 MIR521-2-201ENST00000384818 87 ntBASIC0.76□□□□□ -2.29
DDX11Q96FC9 MIR193B-201ENST00000384907 83 ntBASIC0.76□□□□□ -2.29
DDX11Q96FC9 RNA5SP299-201ENST00000391203 116 ntBASIC0.76□□□□□ -2.29
DDX11Q96FC9 RNU6-542P-201ENST00000516405 103 ntBASIC0.76□□□□□ -2.29
DDX11Q96FC9 MIR6755-201ENST00000619993 66 ntBASIC0.76□□□□□ -2.29
DDX11Q96FC9 SNORA63.6-201ENST00000364921 119 ntBASIC0.75□□□□□ -2.29
DDX11Q96FC9 MIR518A1-201ENST00000385068 85 ntBASIC0.75□□□□□ -2.29
DDX11Q96FC9 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
DDX11Q96FC9 SCARNA21.1-201ENST00000515996 128 ntBASIC0.75□□□□□ -2.29
DDX11Q96FC9 RNA5SP347-201ENST00000362445 119 ntBASIC0.74□□□□□ -2.29
DDX11Q96FC9 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
DDX11Q96FC9 Y_RNA.125-201ENST00000363371 111 ntBASIC0.73□□□□□ -2.29
DDX11Q96FC9 RNU6-1162P-201ENST00000384443 104 ntBASIC0.73□□□□□ -2.29
DDX11Q96FC9 MIR633-201ENST00000384821 98 ntBASIC0.73□□□□□ -2.29
DDX11Q96FC9 MIR1273G-201ENST00000577677 100 ntBASIC0.73□□□□□ -2.29
DDX11Q96FC9 U2.7-201ENST00000619197 100 ntBASIC0.73□□□□□ -2.29
DDX11Q96FC9 uc_338.10-201ENST00000621872 182 ntBASIC0.73□□□□□ -2.29
DDX11Q96FC9 RNA5SP192-201ENST00000364404 120 ntBASIC0.72□□□□□ -2.29
DDX11Q96FC9 Y_RNA.374-201ENST00000365606 101 ntBASIC0.72□□□□□ -2.29
DDX11Q96FC9 RNU6-499P-201ENST00000365615 107 ntBASIC0.72□□□□□ -2.29
DDX11Q96FC9 Y_RNA.423-201ENST00000384057 113 ntBASIC0.72□□□□□ -2.29
DDX11Q96FC9 RNU6-848P-201ENST00000515948 107 ntBASIC0.72□□□□□ -2.29
DDX11Q96FC9 RNU6-617P-201ENST00000516147 107 ntBASIC0.72□□□□□ -2.29
DDX11Q96FC9 RNU6-473P-201ENST00000516164 107 ntBASIC0.72□□□□□ -2.29
DDX11Q96FC9 RNU6-1049P-201ENST00000516414 107 ntBASIC0.72□□□□□ -2.29
DDX11Q96FC9 RNA5SP121-201ENST00000516537 101 ntBASIC0.72□□□□□ -2.29
DDX11Q96FC9 MIR548V-201ENST00000584165 80 ntBASIC0.72□□□□□ -2.29
DDX11Q96FC9 AC090617.8-201ENST00000623339 167 ntBASIC0.72□□□□□ -2.29
DDX11Q96FC9 RNA5SP215-201ENST00000363440 122 ntBASIC0.71□□□□□ -2.3
DDX11Q96FC9 SNORA75.1-201ENST00000391130 148 ntBASIC0.71□□□□□ -2.3
DDX11Q96FC9 SNORD71-201ENST00000411292 86 ntBASIC0.71□□□□□ -2.3
DDX11Q96FC9 AC098934.3-201ENST00000430450 190 ntBASIC0.71□□□□□ -2.3
DDX11Q96FC9 SNORA25.5-201ENST00000363782 126 ntBASIC0.7□□□□□ -2.3
DDX11Q96FC9 SNORA2A-201ENST00000383885 135 ntBASIC0.7□□□□□ -2.3
DDX11Q96FC9 RNU6-945P-201ENST00000383947 107 ntBASIC0.7□□□□□ -2.3
DDX11Q96FC9 RNU7-174P-201ENST00000516248 59 ntBASIC0.7□□□□□ -2.3
DDX11Q96FC9 SNORD114-23-201ENST00000363536 72 ntBASIC0.69□□□□□ -2.3
DDX11Q96FC9 SNORA15B-2-201ENST00000384058 135 ntBASIC0.69□□□□□ -2.3
DDX11Q96FC9 SNORA15B-1-201ENST00000384334 135 ntBASIC0.69□□□□□ -2.3
DDX11Q96FC9 MIR548C-201ENST00000384815 97 ntBASIC0.69□□□□□ -2.3
DDX11Q96FC9 MIR630-201ENST00000384957 97 ntBASIC0.69□□□□□ -2.3
DDX11Q96FC9 U4.4-201ENST00000620626 117 ntBASIC0.69□□□□□ -2.3
DDX11Q96FC9 MIR516B1-201ENST00000385211 90 ntBASIC0.68□□□□□ -2.3
DDX11Q96FC9 SNORA49-201ENST00000386157 136 ntBASIC0.68□□□□□ -2.3
DDX11Q96FC9 MIR501-201ENST00000390204 84 ntBASIC0.68□□□□□ -2.3
DDX11Q96FC9 AC079150.2-201ENST00000443733 78 ntBASIC0.68□□□□□ -2.3
DDX11Q96FC9 RNU6-229P-201ENST00000516614 102 ntBASIC0.68□□□□□ -2.3
DDX11Q96FC9 U7.6-201ENST00000610841 64 ntBASIC0.68□□□□□ -2.3
DDX11Q96FC9 AC010487.4-201ENST00000637027 61 ntBASIC0.68□□□□□ -2.3
DDX11Q96FC9 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
DDX11Q96FC9 RNA5SP457-201ENST00000363657 124 ntBASIC0.67□□□□□ -2.3
DDX11Q96FC9 MIR92A1-201ENST00000385233 78 ntBASIC0.67□□□□□ -2.3
DDX11Q96FC9 RNA5SP193-201ENST00000410353 107 ntBASIC0.67□□□□□ -2.3
DDX11Q96FC9 AC244090.1-201ENST00000441884 93 ntBASIC0.67□□□□□ -2.3
DDX11Q96FC9 MIR4711-201ENST00000578274 70 ntBASIC0.67□□□□□ -2.3
DDX11Q96FC9 AC243829.3-201ENST00000622177 108 ntBASIC0.67□□□□□ -2.3
DDX11Q96FC9 MIR924-201ENST00000638017 53 ntBASIC0.67□□□□□ -2.3
DDX11Q96FC9 MIR20A-201ENST00000362279 71 ntBASIC0.66□□□□□ -2.3
DDX11Q96FC9 RNU6-1079P-201ENST00000362861 110 ntBASIC0.66□□□□□ -2.3
DDX11Q96FC9 RNA5SP499-201ENST00000363982 119 ntBASIC0.66□□□□□ -2.3
DDX11Q96FC9 MTND4LP19-201ENST00000403051 166 ntBASIC0.66□□□□□ -2.3
DDX11Q96FC9 SNORA68.3-201ENST00000515906 83 ntBASIC0.66□□□□□ -2.3
DDX11Q96FC9 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.66□□□□□ -2.3
DDX11Q96FC9 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 219.3 ms