Protein–RNA interactions for Protein: Q96EE3

SEH1L, Nucleoporin SEH1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1LQ96EE3 AC099654.10-201ENST00000640395 161 ntBASIC-1.14□□□□□ -2.59
SEH1LQ96EE3 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.15□□□□□ -2.59
SEH1LQ96EE3 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.15□□□□□ -2.59
SEH1LQ96EE3 MIR548A3-201ENST00000385297 97 ntBASIC-1.15□□□□□ -2.59
SEH1LQ96EE3 MIR8485-201ENST00000401372 91 ntBASIC-1.15□□□□□ -2.59
SEH1LQ96EE3 MIR548I1-201ENST00000408810 149 ntBASIC-1.15□□□□□ -2.59
SEH1LQ96EE3 AC006254.2-201ENST00000603259 279 ntBASIC-1.15□□□□□ -2.59
SEH1LQ96EE3 RNU6-226P-201ENST00000363778 107 ntBASIC-1.16□□□□□ -2.6
SEH1LQ96EE3 RNU6-382P-201ENST00000365181 106 ntBASIC-1.16□□□□□ -2.6
SEH1LQ96EE3 SNORA62.4-201ENST00000365504 151 ntBASIC-1.16□□□□□ -2.6
SEH1LQ96EE3 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.16□□□□□ -2.6
SEH1LQ96EE3 snoU83B.1-201ENST00000517136 88 ntBASIC-1.16□□□□□ -2.6
SEH1LQ96EE3 MIR4777-201ENST00000583710 86 ntBASIC-1.16□□□□□ -2.6
SEH1LQ96EE3 AC012531.4-201ENST00000616509 177 ntBASIC-1.16□□□□□ -2.6
SEH1LQ96EE3 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.16□□□□□ -2.6
SEH1LQ96EE3 SNORD114-17-201ENST00000364699 75 ntBASIC-1.17□□□□□ -2.6
SEH1LQ96EE3 RNU7-24P-201ENST00000458867 62 ntBASIC-1.17□□□□□ -2.6
SEH1LQ96EE3 RNU6-62P-201ENST00000516526 102 ntBASIC-1.17□□□□□ -2.6
SEH1LQ96EE3 MIR5591-201ENST00000578248 65 ntBASIC-1.17□□□□□ -2.6
SEH1LQ96EE3 AC090617.8-201ENST00000623339 167 ntBASIC-1.17□□□□□ -2.6
SEH1LQ96EE3 RNU5F-1-201ENST00000362507 117 ntBASIC-1.18□□□□□ -2.6
SEH1LQ96EE3 RNU7-134P-201ENST00000458997 64 ntBASIC-1.18□□□□□ -2.6
SEH1LQ96EE3 RNU7-200P-201ENST00000516105 62 ntBASIC-1.18□□□□□ -2.6
SEH1LQ96EE3 RNU6-346P-201ENST00000516288 111 ntBASIC-1.18□□□□□ -2.6
SEH1LQ96EE3 RNU6-479P-201ENST00000516348 105 ntBASIC-1.18□□□□□ -2.6
SEH1LQ96EE3 YWHAEP3-201ENST00000582767 121 ntBASIC-1.18□□□□□ -2.6
SEH1LQ96EE3 AL353803.5-201ENST00000599815 141 ntBASIC-1.18□□□□□ -2.6
SEH1LQ96EE3 AC132825.6-201ENST00000638861 357 ntBASIC-1.18□□□□□ -2.6
SEH1LQ96EE3 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.19□□□□□ -2.6
SEH1LQ96EE3 MIR1468-201ENST00000410600 86 ntBASIC-1.19□□□□□ -2.6
SEH1LQ96EE3 MIR6509-201ENST00000614603 85 ntBASIC-1.19□□□□□ -2.6
SEH1LQ96EE3 MIR6129-201ENST00000616087 109 ntBASIC-1.19□□□□□ -2.6
SEH1LQ96EE3 MIR3914-2-201ENST00000637339 95 ntBASIC-1.19□□□□□ -2.6
SEH1LQ96EE3 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.2□□□□□ -2.6
SEH1LQ96EE3 RNU6-260P-201ENST00000384092 107 ntBASIC-1.2□□□□□ -2.6
SEH1LQ96EE3 snoU13.17-201ENST00000458802 104 ntBASIC-1.2□□□□□ -2.6
SEH1LQ96EE3 RNA5SP180-201ENST00000516181 101 ntBASIC-1.2□□□□□ -2.6
SEH1LQ96EE3 MIR601-201ENST00000385256 79 ntBASIC-1.21□□□□□ -2.6
SEH1LQ96EE3 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.21□□□□□ -2.6
SEH1LQ96EE3 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.21□□□□□ -2.6
SEH1LQ96EE3 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.21□□□□□ -2.6
SEH1LQ96EE3 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.21□□□□□ -2.6
SEH1LQ96EE3 SNORA33.1-201ENST00000364957 130 ntBASIC-1.22□□□□□ -2.6
SEH1LQ96EE3 SNORA19.1-201ENST00000410656 129 ntBASIC-1.22□□□□□ -2.6
SEH1LQ96EE3 AL691482.2-201ENST00000457453 84 ntBASIC-1.22□□□□□ -2.6
SEH1LQ96EE3 RNU6-824P-201ENST00000363724 104 ntBASIC-1.23□□□□□ -2.61
SEH1LQ96EE3 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.23□□□□□ -2.61
SEH1LQ96EE3 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.23□□□□□ -2.61
SEH1LQ96EE3 MIR1255B2-201ENST00000408618 67 ntBASIC-1.23□□□□□ -2.61
SEH1LQ96EE3 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.23□□□□□ -2.61
SEH1LQ96EE3 MIR1246-201ENST00000636535 73 ntBASIC-1.23□□□□□ -2.61
SEH1LQ96EE3 U6.95-201ENST00000636931 70 ntBASIC-1.23□□□□□ -2.61
SEH1LQ96EE3 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.24□□□□□ -2.61
SEH1LQ96EE3 MIR889-201ENST00000401280 79 ntBASIC-1.24□□□□□ -2.61
SEH1LQ96EE3 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.24□□□□□ -2.61
SEH1LQ96EE3 MIR4770-201ENST00000579149 58 ntBASIC-1.24□□□□□ -2.61
SEH1LQ96EE3 MIR4719-201ENST00000585233 84 ntBASIC-1.24□□□□□ -2.61
SEH1LQ96EE3 SNORD58A-201ENST00000383875 65 ntBASIC-1.25□□□□□ -2.61
SEH1LQ96EE3 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.25□□□□□ -2.61
SEH1LQ96EE3 RNU6-80P-201ENST00000384195 107 ntBASIC-1.25□□□□□ -2.61
SEH1LQ96EE3 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.25□□□□□ -2.61
SEH1LQ96EE3 RNU6-972P-201ENST00000391208 107 ntBASIC-1.25□□□□□ -2.61
SEH1LQ96EE3 RNU6-887P-201ENST00000410660 100 ntBASIC-1.25□□□□□ -2.61
SEH1LQ96EE3 SCARNA23-201ENST00000516060 130 ntBASIC-1.25□□□□□ -2.61
SEH1LQ96EE3 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.25□□□□□ -2.61
SEH1LQ96EE3 MIR1285-2-201ENST00000408311 88 ntBASIC-1.26□□□□□ -2.61
SEH1LQ96EE3 MIR4520-1-201ENST00000582609 70 ntBASIC-1.26□□□□□ -2.61
SEH1LQ96EE3 MIR3657-201ENST00000584818 117 ntBASIC-1.26□□□□□ -2.61
SEH1LQ96EE3 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.27□□□□□ -2.61
SEH1LQ96EE3 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.27□□□□□ -2.61
SEH1LQ96EE3 RNU6-907P-201ENST00000390924 102 ntBASIC-1.27□□□□□ -2.61
SEH1LQ96EE3 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.27□□□□□ -2.61
SEH1LQ96EE3 RNU6-158P-201ENST00000517104 100 ntBASIC-1.27□□□□□ -2.61
SEH1LQ96EE3 MIR4464-201ENST00000580818 92 ntBASIC-1.27□□□□□ -2.61
SEH1LQ96EE3 MIR6888-201ENST00000621977 67 ntBASIC-1.27□□□□□ -2.61
SEH1LQ96EE3 SNORA2.1-201ENST00000363089 137 ntBASIC-1.28□□□□□ -2.61
SEH1LQ96EE3 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.28□□□□□ -2.61
SEH1LQ96EE3 RNU6-412P-201ENST00000516434 106 ntBASIC-1.28□□□□□ -2.61
SEH1LQ96EE3 CYP3A54P-201ENST00000566950 75 ntBASIC-1.28□□□□□ -2.61
SEH1LQ96EE3 MIR4796-201ENST00000580742 81 ntBASIC-1.28□□□□□ -2.61
SEH1LQ96EE3 AL445584.3-201ENST00000617173 78 ntBASIC-1.28□□□□□ -2.61
SEH1LQ96EE3 MIR198-201ENST00000637333 62 ntBASIC-1.28□□□□□ -2.61
SEH1LQ96EE3 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.29□□□□□ -2.62
SEH1LQ96EE3 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.29□□□□□ -2.62
SEH1LQ96EE3 RNU6-880P-201ENST00000384526 107 ntBASIC-1.29□□□□□ -2.62
SEH1LQ96EE3 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.29□□□□□ -2.62
SEH1LQ96EE3 MIR527-201ENST00000385244 85 ntBASIC-1.29□□□□□ -2.62
SEH1LQ96EE3 RNU6-255P-201ENST00000516957 105 ntBASIC-1.29□□□□□ -2.62
SEH1LQ96EE3 MIR4723-201ENST00000585070 81 ntBASIC-1.29□□□□□ -2.62
SEH1LQ96EE3 AC090425.1-201ENST00000610007 140 ntBASIC-1.29□□□□□ -2.62
SEH1LQ96EE3 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.3□□□□□ -2.62
SEH1LQ96EE3 SNORD116-21-201ENST00000384507 92 ntBASIC-1.3□□□□□ -2.62
SEH1LQ96EE3 RNU6-659P-201ENST00000516454 104 ntBASIC-1.3□□□□□ -2.62
SEH1LQ96EE3 MIR6502-201ENST00000617296 76 ntBASIC-1.3□□□□□ -2.62
SEH1LQ96EE3 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.3□□□□□ -2.62
SEH1LQ96EE3 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.31□□□□□ -2.62
SEH1LQ96EE3 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.31□□□□□ -2.62
SEH1LQ96EE3 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.31□□□□□ -2.62
SEH1LQ96EE3 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.31□□□□□ -2.62
SEH1LQ96EE3 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.31□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 189.5 ms