Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 MIR4514-201ENST00000581410 57 ntBASIC0.45□□□□□ -2.34
ATP2A3Q93084 MIR582-201ENST00000365731 98 ntBASIC0.44□□□□□ -2.34
ATP2A3Q93084 RNU6-863P-201ENST00000515989 104 ntBASIC0.44□□□□□ -2.34
ATP2A3Q93084 RNU6-776P-201ENST00000364403 104 ntBASIC0.43□□□□□ -2.34
ATP2A3Q93084 RNU6-1022P-201ENST00000365049 104 ntBASIC0.43□□□□□ -2.34
ATP2A3Q93084 RNU6-1039P-201ENST00000383931 107 ntBASIC0.43□□□□□ -2.34
ATP2A3Q93084 MIR652-201ENST00000385278 98 ntBASIC0.43□□□□□ -2.34
ATP2A3Q93084 RNA5SP63-201ENST00000391225 112 ntBASIC0.43□□□□□ -2.34
ATP2A3Q93084 RNU6-274P-201ENST00000459566 107 ntBASIC0.43□□□□□ -2.34
ATP2A3Q93084 MIR2909-201ENST00000617113 69 ntBASIC0.43□□□□□ -2.34
ATP2A3Q93084 MIRLET7D-201ENST00000362263 87 ntBASIC0.42□□□□□ -2.34
ATP2A3Q93084 MIR760-201ENST00000390220 80 ntBASIC0.42□□□□□ -2.34
ATP2A3Q93084 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.42□□□□□ -2.34
ATP2A3Q93084 Y_RNA.125-201ENST00000363371 111 ntBASIC0.41□□□□□ -2.34
ATP2A3Q93084 Y_RNA.407-201ENST00000383986 113 ntBASIC0.41□□□□□ -2.34
ATP2A3Q93084 RNU6-807P-201ENST00000516805 107 ntBASIC0.41□□□□□ -2.34
ATP2A3Q93084 MIR6509-201ENST00000614603 85 ntBASIC0.41□□□□□ -2.34
ATP2A3Q93084 U7.4-201ENST00000614961 63 ntBASIC0.41□□□□□ -2.34
ATP2A3Q93084 MIR499B-201ENST00000636498 73 ntBASIC0.41□□□□□ -2.34
ATP2A3Q93084 MIR1297-201ENST00000637311 77 ntBASIC0.41□□□□□ -2.34
ATP2A3Q93084 SNORA2A-201ENST00000383885 135 ntBASIC0.4□□□□□ -2.35
ATP2A3Q93084 AL691482.2-201ENST00000457453 84 ntBASIC0.4□□□□□ -2.35
ATP2A3Q93084 MIR4677-201ENST00000584153 80 ntBASIC0.4□□□□□ -2.35
ATP2A3Q93084 MIR3657-201ENST00000584818 117 ntBASIC0.4□□□□□ -2.35
ATP2A3Q93084 AC090625.1-201ENST00000357130 210 ntBASIC0.39□□□□□ -2.35
ATP2A3Q93084 RNU6-681P-201ENST00000364012 104 ntBASIC0.39□□□□□ -2.35
ATP2A3Q93084 RNU6-604P-201ENST00000390917 100 ntBASIC0.39□□□□□ -2.35
ATP2A3Q93084 MIR548E-201ENST00000408287 88 ntBASIC0.39□□□□□ -2.35
ATP2A3Q93084 snoU13.13-201ENST00000458842 104 ntBASIC0.39□□□□□ -2.35
ATP2A3Q93084 RNU7-129P-201ENST00000516128 62 ntBASIC0.39□□□□□ -2.35
ATP2A3Q93084 RNU6-70P-201ENST00000516438 60 ntBASIC0.39□□□□□ -2.35
ATP2A3Q93084 RNU6-687P-201ENST00000516443 89 ntBASIC0.39□□□□□ -2.35
ATP2A3Q93084 RNA5SP147-201ENST00000516493 109 ntBASIC0.39□□□□□ -2.35
ATP2A3Q93084 RNU6-1015P-201ENST00000517121 99 ntBASIC0.39□□□□□ -2.35
ATP2A3Q93084 MIR5706-201ENST00000579841 80 ntBASIC0.39□□□□□ -2.35
ATP2A3Q93084 MIR3675-201ENST00000583661 73 ntBASIC0.39□□□□□ -2.35
ATP2A3Q93084 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
ATP2A3Q93084 RNU6-815P-201ENST00000384080 113 ntBASIC0.38□□□□□ -2.35
ATP2A3Q93084 Y_RNA.565-201ENST00000384719 101 ntBASIC0.38□□□□□ -2.35
ATP2A3Q93084 RNU6-380P-201ENST00000410207 107 ntBASIC0.38□□□□□ -2.35
ATP2A3Q93084 SCARNA17.3-201ENST00000516381 125 ntBASIC0.38□□□□□ -2.35
ATP2A3Q93084 RNA5SP128-201ENST00000365305 116 ntBASIC0.37□□□□□ -2.35
ATP2A3Q93084 SNORD115-31-201ENST00000365318 82 ntBASIC0.37□□□□□ -2.35
ATP2A3Q93084 RNU6-1241P-201ENST00000384536 107 ntBASIC0.37□□□□□ -2.35
ATP2A3Q93084 RNU6-848P-201ENST00000515948 107 ntBASIC0.37□□□□□ -2.35
ATP2A3Q93084 RNU6-617P-201ENST00000516147 107 ntBASIC0.37□□□□□ -2.35
ATP2A3Q93084 RNU6-473P-201ENST00000516164 107 ntBASIC0.37□□□□□ -2.35
ATP2A3Q93084 RNU6-752P-201ENST00000516376 102 ntBASIC0.37□□□□□ -2.35
ATP2A3Q93084 RNU6-1049P-201ENST00000516414 107 ntBASIC0.37□□□□□ -2.35
ATP2A3Q93084 RNA5SP134-201ENST00000516492 96 ntBASIC0.37□□□□□ -2.35
ATP2A3Q93084 MIR3925-201ENST00000584674 77 ntBASIC0.37□□□□□ -2.35
ATP2A3Q93084 MIR548AD-201ENST00000584780 82 ntBASIC0.37□□□□□ -2.35
ATP2A3Q93084 SNORD115-22-201ENST00000364456 82 ntBASIC0.36□□□□□ -2.35
ATP2A3Q93084 RNU6-260P-201ENST00000384092 107 ntBASIC0.36□□□□□ -2.35
ATP2A3Q93084 SNORD45A-201ENST00000384512 84 ntBASIC0.36□□□□□ -2.35
ATP2A3Q93084 Y_RNA.545-201ENST00000384652 105 ntBASIC0.36□□□□□ -2.35
ATP2A3Q93084 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.36□□□□□ -2.35
ATP2A3Q93084 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
ATP2A3Q93084 MIR1265-201ENST00000408444 86 ntBASIC0.36□□□□□ -2.35
ATP2A3Q93084 RNU7-188P-201ENST00000517063 64 ntBASIC0.36□□□□□ -2.35
ATP2A3Q93084 AC023932.2-201ENST00000603176 175 ntBASIC0.36□□□□□ -2.35
ATP2A3Q93084 SNORD45.1-201ENST00000363181 77 ntBASIC0.35□□□□□ -2.35
ATP2A3Q93084 MIR516B1-201ENST00000385211 90 ntBASIC0.35□□□□□ -2.35
ATP2A3Q93084 SNORA49-201ENST00000386157 136 ntBASIC0.35□□□□□ -2.35
ATP2A3Q93084 RNU6-982P-201ENST00000516216 102 ntBASIC0.35□□□□□ -2.35
ATP2A3Q93084 RNU6-175P-201ENST00000516896 107 ntBASIC0.35□□□□□ -2.35
ATP2A3Q93084 MIR4662A-201ENST00000637499 67 ntBASIC0.35□□□□□ -2.35
ATP2A3Q93084 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.35□□□□□ -2.35
ATP2A3Q93084 RNU6-1327P-201ENST00000365302 105 ntBASIC0.34□□□□□ -2.36
ATP2A3Q93084 RNU6-1296P-201ENST00000383879 107 ntBASIC0.34□□□□□ -2.36
ATP2A3Q93084 RNU6-411P-201ENST00000384451 107 ntBASIC0.34□□□□□ -2.36
ATP2A3Q93084 RNU6-127P-201ENST00000390897 107 ntBASIC0.34□□□□□ -2.36
ATP2A3Q93084 RNU6-587P-201ENST00000391282 106 ntBASIC0.34□□□□□ -2.36
ATP2A3Q93084 SNORA2.1-201ENST00000363089 137 ntBASIC0.33□□□□□ -2.36
ATP2A3Q93084 MIR329-2-201ENST00000385029 84 ntBASIC0.33□□□□□ -2.36
ATP2A3Q93084 AC073261.1-201ENST00000429409 121 ntBASIC0.33□□□□□ -2.36
ATP2A3Q93084 U7.6-201ENST00000610841 64 ntBASIC0.33□□□□□ -2.36
ATP2A3Q93084 RN7SL660P-201ENST00000614852 299 ntBASIC0.33□□□□□ -2.36
ATP2A3Q93084 uc_338.10-201ENST00000621872 182 ntBASIC0.33□□□□□ -2.36
ATP2A3Q93084 MIR548H2-201ENST00000408874 88 ntBASIC0.32□□□□□ -2.36
ATP2A3Q93084 AC108740.1-201ENST00000498629 225 ntBASIC0.31□□□□□ -2.36
ATP2A3Q93084 AC021146.9-201ENST00000512503 156 ntBASIC0.31□□□□□ -2.36
ATP2A3Q93084 SNORA9.1-201ENST00000362412 131 ntBASIC0.3□□□□□ -2.36
ATP2A3Q93084 SNORD114-4-201ENST00000363962 75 ntBASIC0.3□□□□□ -2.36
ATP2A3Q93084 SNORA63.6-201ENST00000364921 119 ntBASIC0.3□□□□□ -2.36
ATP2A3Q93084 MIR154-201ENST00000385243 84 ntBASIC0.3□□□□□ -2.36
ATP2A3Q93084 MIR876-201ENST00000401147 81 ntBASIC0.3□□□□□ -2.36
ATP2A3Q93084 Y_RNA.633-201ENST00000459107 95 ntBASIC0.3□□□□□ -2.36
ATP2A3Q93084 RNU6-634P-201ENST00000459134 106 ntBASIC0.3□□□□□ -2.36
ATP2A3Q93084 AC069113.3-201ENST00000521019 150 ntBASIC0.3□□□□□ -2.36
ATP2A3Q93084 SNORD113.1-201ENST00000363280 73 ntBASIC0.29□□□□□ -2.36
ATP2A3Q93084 SNORD116-24-201ENST00000384549 92 ntBASIC0.29□□□□□ -2.36
ATP2A3Q93084 RNU6-540P-201ENST00000384622 101 ntBASIC0.29□□□□□ -2.36
ATP2A3Q93084 MIR643-201ENST00000385267 97 ntBASIC0.29□□□□□ -2.36
ATP2A3Q93084 AC090617.8-201ENST00000623339 167 ntBASIC0.29□□□□□ -2.36
ATP2A3Q93084 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.29□□□□□ -2.36
ATP2A3Q93084 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.28□□□□□ -2.36
ATP2A3Q93084 RNU6-656P-201ENST00000516785 107 ntBASIC0.28□□□□□ -2.36
ATP2A3Q93084 SCARNA11.2-201ENST00000517183 154 ntBASIC0.28□□□□□ -2.36
ATP2A3Q93084 MIR4636-201ENST00000582271 80 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 181.5 ms