Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 MIR4514-201ENST00000581410 57 ntBASIC0.45□□□□□ -2.34
ATP2A3Q93084 MIR582-201ENST00000365731 98 ntBASIC0.44□□□□□ -2.34
ATP2A3Q93084 RNU6-863P-201ENST00000515989 104 ntBASIC0.44□□□□□ -2.34
ATP2A3Q93084 RNU6-776P-201ENST00000364403 104 ntBASIC0.43□□□□□ -2.34
ATP2A3Q93084 RNU6-1022P-201ENST00000365049 104 ntBASIC0.43□□□□□ -2.34
ATP2A3Q93084 RNU6-1039P-201ENST00000383931 107 ntBASIC0.43□□□□□ -2.34
ATP2A3Q93084 MIR652-201ENST00000385278 98 ntBASIC0.43□□□□□ -2.34
ATP2A3Q93084 RNA5SP63-201ENST00000391225 112 ntBASIC0.43□□□□□ -2.34
ATP2A3Q93084 RNU6-274P-201ENST00000459566 107 ntBASIC0.43□□□□□ -2.34
ATP2A3Q93084 MIR2909-201ENST00000617113 69 ntBASIC0.43□□□□□ -2.34
ATP2A3Q93084 MIRLET7D-201ENST00000362263 87 ntBASIC0.42□□□□□ -2.34
ATP2A3Q93084 MIR760-201ENST00000390220 80 ntBASIC0.42□□□□□ -2.34
ATP2A3Q93084 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.42□□□□□ -2.34
ATP2A3Q93084 Y_RNA.125-201ENST00000363371 111 ntBASIC0.41□□□□□ -2.34
ATP2A3Q93084 Y_RNA.407-201ENST00000383986 113 ntBASIC0.41□□□□□ -2.34
ATP2A3Q93084 RNU6-807P-201ENST00000516805 107 ntBASIC0.41□□□□□ -2.34
ATP2A3Q93084 MIR6509-201ENST00000614603 85 ntBASIC0.41□□□□□ -2.34
ATP2A3Q93084 U7.4-201ENST00000614961 63 ntBASIC0.41□□□□□ -2.34
ATP2A3Q93084 MIR499B-201ENST00000636498 73 ntBASIC0.41□□□□□ -2.34
ATP2A3Q93084 MIR1297-201ENST00000637311 77 ntBASIC0.41□□□□□ -2.34
ATP2A3Q93084 SNORA2A-201ENST00000383885 135 ntBASIC0.4□□□□□ -2.35
ATP2A3Q93084 AL691482.2-201ENST00000457453 84 ntBASIC0.4□□□□□ -2.35
ATP2A3Q93084 MIR4677-201ENST00000584153 80 ntBASIC0.4□□□□□ -2.35
ATP2A3Q93084 MIR3657-201ENST00000584818 117 ntBASIC0.4□□□□□ -2.35
ATP2A3Q93084 AC090625.1-201ENST00000357130 210 ntBASIC0.39□□□□□ -2.35
ATP2A3Q93084 RNU6-681P-201ENST00000364012 104 ntBASIC0.39□□□□□ -2.35
ATP2A3Q93084 RNU6-604P-201ENST00000390917 100 ntBASIC0.39□□□□□ -2.35
ATP2A3Q93084 MIR548E-201ENST00000408287 88 ntBASIC0.39□□□□□ -2.35
ATP2A3Q93084 snoU13.13-201ENST00000458842 104 ntBASIC0.39□□□□□ -2.35
ATP2A3Q93084 RNU7-129P-201ENST00000516128 62 ntBASIC0.39□□□□□ -2.35
ATP2A3Q93084 RNU6-70P-201ENST00000516438 60 ntBASIC0.39□□□□□ -2.35
ATP2A3Q93084 RNU6-687P-201ENST00000516443 89 ntBASIC0.39□□□□□ -2.35
ATP2A3Q93084 RNA5SP147-201ENST00000516493 109 ntBASIC0.39□□□□□ -2.35
ATP2A3Q93084 RNU6-1015P-201ENST00000517121 99 ntBASIC0.39□□□□□ -2.35
ATP2A3Q93084 MIR5706-201ENST00000579841 80 ntBASIC0.39□□□□□ -2.35
ATP2A3Q93084 MIR3675-201ENST00000583661 73 ntBASIC0.39□□□□□ -2.35
ATP2A3Q93084 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.39□□□□□ -2.35
ATP2A3Q93084 RNU6-815P-201ENST00000384080 113 ntBASIC0.38□□□□□ -2.35
ATP2A3Q93084 Y_RNA.565-201ENST00000384719 101 ntBASIC0.38□□□□□ -2.35
ATP2A3Q93084 RNU6-380P-201ENST00000410207 107 ntBASIC0.38□□□□□ -2.35
ATP2A3Q93084 SCARNA17.3-201ENST00000516381 125 ntBASIC0.38□□□□□ -2.35
ATP2A3Q93084 RNA5SP128-201ENST00000365305 116 ntBASIC0.37□□□□□ -2.35
ATP2A3Q93084 SNORD115-31-201ENST00000365318 82 ntBASIC0.37□□□□□ -2.35
ATP2A3Q93084 RNU6-1241P-201ENST00000384536 107 ntBASIC0.37□□□□□ -2.35
ATP2A3Q93084 RNU6-848P-201ENST00000515948 107 ntBASIC0.37□□□□□ -2.35
ATP2A3Q93084 RNU6-617P-201ENST00000516147 107 ntBASIC0.37□□□□□ -2.35
ATP2A3Q93084 RNU6-473P-201ENST00000516164 107 ntBASIC0.37□□□□□ -2.35
ATP2A3Q93084 RNU6-752P-201ENST00000516376 102 ntBASIC0.37□□□□□ -2.35
ATP2A3Q93084 RNU6-1049P-201ENST00000516414 107 ntBASIC0.37□□□□□ -2.35
ATP2A3Q93084 RNA5SP134-201ENST00000516492 96 ntBASIC0.37□□□□□ -2.35
ATP2A3Q93084 MIR3925-201ENST00000584674 77 ntBASIC0.37□□□□□ -2.35
ATP2A3Q93084 MIR548AD-201ENST00000584780 82 ntBASIC0.37□□□□□ -2.35
ATP2A3Q93084 SNORD115-22-201ENST00000364456 82 ntBASIC0.36□□□□□ -2.35
ATP2A3Q93084 RNU6-260P-201ENST00000384092 107 ntBASIC0.36□□□□□ -2.35
ATP2A3Q93084 SNORD45A-201ENST00000384512 84 ntBASIC0.36□□□□□ -2.35
ATP2A3Q93084 Y_RNA.545-201ENST00000384652 105 ntBASIC0.36□□□□□ -2.35
ATP2A3Q93084 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.36□□□□□ -2.35
ATP2A3Q93084 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
ATP2A3Q93084 MIR1265-201ENST00000408444 86 ntBASIC0.36□□□□□ -2.35
ATP2A3Q93084 RNU7-188P-201ENST00000517063 64 ntBASIC0.36□□□□□ -2.35
ATP2A3Q93084 AC023932.2-201ENST00000603176 175 ntBASIC0.36□□□□□ -2.35
ATP2A3Q93084 SNORD45.1-201ENST00000363181 77 ntBASIC0.35□□□□□ -2.35
ATP2A3Q93084 MIR516B1-201ENST00000385211 90 ntBASIC0.35□□□□□ -2.35
ATP2A3Q93084 SNORA49-201ENST00000386157 136 ntBASIC0.35□□□□□ -2.35
ATP2A3Q93084 RNU6-982P-201ENST00000516216 102 ntBASIC0.35□□□□□ -2.35
ATP2A3Q93084 RNU6-175P-201ENST00000516896 107 ntBASIC0.35□□□□□ -2.35
ATP2A3Q93084 MIR4662A-201ENST00000637499 67 ntBASIC0.35□□□□□ -2.35
ATP2A3Q93084 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.35□□□□□ -2.35
ATP2A3Q93084 RNU6-1327P-201ENST00000365302 105 ntBASIC0.34□□□□□ -2.36
ATP2A3Q93084 RNU6-1296P-201ENST00000383879 107 ntBASIC0.34□□□□□ -2.36
ATP2A3Q93084 RNU6-411P-201ENST00000384451 107 ntBASIC0.34□□□□□ -2.36
ATP2A3Q93084 RNU6-127P-201ENST00000390897 107 ntBASIC0.34□□□□□ -2.36
ATP2A3Q93084 RNU6-587P-201ENST00000391282 106 ntBASIC0.34□□□□□ -2.36
ATP2A3Q93084 SNORA2.1-201ENST00000363089 137 ntBASIC0.33□□□□□ -2.36
ATP2A3Q93084 MIR329-2-201ENST00000385029 84 ntBASIC0.33□□□□□ -2.36
ATP2A3Q93084 AC073261.1-201ENST00000429409 121 ntBASIC0.33□□□□□ -2.36
ATP2A3Q93084 U7.6-201ENST00000610841 64 ntBASIC0.33□□□□□ -2.36
ATP2A3Q93084 RN7SL660P-201ENST00000614852 299 ntBASIC0.33□□□□□ -2.36
ATP2A3Q93084 uc_338.10-201ENST00000621872 182 ntBASIC0.33□□□□□ -2.36
ATP2A3Q93084 MIR548H2-201ENST00000408874 88 ntBASIC0.32□□□□□ -2.36
ATP2A3Q93084 AC108740.1-201ENST00000498629 225 ntBASIC0.31□□□□□ -2.36
ATP2A3Q93084 AC021146.9-201ENST00000512503 156 ntBASIC0.31□□□□□ -2.36
ATP2A3Q93084 SNORA9.1-201ENST00000362412 131 ntBASIC0.3□□□□□ -2.36
ATP2A3Q93084 SNORD114-4-201ENST00000363962 75 ntBASIC0.3□□□□□ -2.36
ATP2A3Q93084 SNORA63.6-201ENST00000364921 119 ntBASIC0.3□□□□□ -2.36
ATP2A3Q93084 MIR154-201ENST00000385243 84 ntBASIC0.3□□□□□ -2.36
ATP2A3Q93084 MIR876-201ENST00000401147 81 ntBASIC0.3□□□□□ -2.36
ATP2A3Q93084 Y_RNA.633-201ENST00000459107 95 ntBASIC0.3□□□□□ -2.36
ATP2A3Q93084 RNU6-634P-201ENST00000459134 106 ntBASIC0.3□□□□□ -2.36
ATP2A3Q93084 AC069113.3-201ENST00000521019 150 ntBASIC0.3□□□□□ -2.36
ATP2A3Q93084 SNORD113.1-201ENST00000363280 73 ntBASIC0.29□□□□□ -2.36
ATP2A3Q93084 SNORD116-24-201ENST00000384549 92 ntBASIC0.29□□□□□ -2.36
ATP2A3Q93084 RNU6-540P-201ENST00000384622 101 ntBASIC0.29□□□□□ -2.36
ATP2A3Q93084 MIR643-201ENST00000385267 97 ntBASIC0.29□□□□□ -2.36
ATP2A3Q93084 AC090617.8-201ENST00000623339 167 ntBASIC0.29□□□□□ -2.36
ATP2A3Q93084 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.29□□□□□ -2.36
ATP2A3Q93084 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.28□□□□□ -2.36
ATP2A3Q93084 RNU6-656P-201ENST00000516785 107 ntBASIC0.28□□□□□ -2.36
ATP2A3Q93084 SCARNA11.2-201ENST00000517183 154 ntBASIC0.28□□□□□ -2.36
ATP2A3Q93084 MIR4636-201ENST00000582271 80 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 205.7 ms