Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 SNORA9.1-201ENST00000362412 131 ntBASIC0.42□□□□□ -2.34
ERCC4Q92889 Y_RNA.374-201ENST00000365606 101 ntBASIC0.42□□□□□ -2.34
ERCC4Q92889 RNU6-815P-201ENST00000384080 113 ntBASIC0.42□□□□□ -2.34
ERCC4Q92889 AL691482.2-201ENST00000457453 84 ntBASIC0.42□□□□□ -2.34
ERCC4Q92889 RNA5SP330-201ENST00000517096 96 ntBASIC0.42□□□□□ -2.34
ERCC4Q92889 MIR4484-201ENST00000582855 83 ntBASIC0.42□□□□□ -2.34
ERCC4Q92889 Y_RNA.788-201ENST00000622394 112 ntBASIC0.42□□□□□ -2.34
ERCC4Q92889 AC069113.3-201ENST00000521019 150 ntBASIC0.41□□□□□ -2.34
ERCC4Q92889 MIR3925-201ENST00000584674 77 ntBASIC0.41□□□□□ -2.34
ERCC4Q92889 MIR6509-201ENST00000614603 85 ntBASIC0.41□□□□□ -2.34
ERCC4Q92889 RNU6-260P-201ENST00000384092 107 ntBASIC0.4□□□□□ -2.35
ERCC4Q92889 RNU6-638P-201ENST00000516582 104 ntBASIC0.4□□□□□ -2.35
ERCC4Q92889 MIR3675-201ENST00000583661 73 ntBASIC0.4□□□□□ -2.35
ERCC4Q92889 AC145423.2-201ENST00000610631 239 ntBASIC0.4□□□□□ -2.35
ERCC4Q92889 AL109933.3-201ENST00000619095 188 ntBASIC0.4□□□□□ -2.35
ERCC4Q92889 MIR499B-201ENST00000636498 73 ntBASIC0.4□□□□□ -2.35
ERCC4Q92889 RNA5SP62-201ENST00000363457 110 ntBASIC0.39□□□□□ -2.35
ERCC4Q92889 RNU6-990P-201ENST00000364385 104 ntBASIC0.39□□□□□ -2.35
ERCC4Q92889 SNORA8.1-201ENST00000384250 140 ntBASIC0.39□□□□□ -2.35
ERCC4Q92889 MIR876-201ENST00000401147 81 ntBASIC0.39□□□□□ -2.35
ERCC4Q92889 AC073261.1-201ENST00000429409 121 ntBASIC0.39□□□□□ -2.35
ERCC4Q92889 MIR3657-201ENST00000584818 117 ntBASIC0.39□□□□□ -2.35
ERCC4Q92889 Y_RNA.244-201ENST00000364484 109 ntBASIC0.38□□□□□ -2.35
ERCC4Q92889 MIR516B1-201ENST00000385211 90 ntBASIC0.38□□□□□ -2.35
ERCC4Q92889 RNU6-782P-201ENST00000516852 104 ntBASIC0.38□□□□□ -2.35
ERCC4Q92889 U7.4-201ENST00000614961 63 ntBASIC0.38□□□□□ -2.35
ERCC4Q92889 MIR582-201ENST00000365731 98 ntBASIC0.37□□□□□ -2.35
ERCC4Q92889 RNU6-127P-201ENST00000390897 107 ntBASIC0.37□□□□□ -2.35
ERCC4Q92889 MIR548E-201ENST00000408287 88 ntBASIC0.37□□□□□ -2.35
ERCC4Q92889 AC244090.1-201ENST00000441884 93 ntBASIC0.37□□□□□ -2.35
ERCC4Q92889 MIR20A-201ENST00000362279 71 ntBASIC0.36□□□□□ -2.35
ERCC4Q92889 Y_RNA.30-201ENST00000362572 97 ntBASIC0.36□□□□□ -2.35
ERCC4Q92889 RNA5SP257-201ENST00000363023 116 ntBASIC0.36□□□□□ -2.35
ERCC4Q92889 SNORA2.1-201ENST00000363089 137 ntBASIC0.36□□□□□ -2.35
ERCC4Q92889 RNU7-129P-201ENST00000516128 62 ntBASIC0.36□□□□□ -2.35
ERCC4Q92889 RNU7-188P-201ENST00000517063 64 ntBASIC0.36□□□□□ -2.35
ERCC4Q92889 SNORD114-29-201ENST00000364819 70 ntBASIC0.35□□□□□ -2.35
ERCC4Q92889 RNA5SP134-201ENST00000516492 96 ntBASIC0.35□□□□□ -2.35
ERCC4Q92889 MIR3134-201ENST00000579433 74 ntBASIC0.35□□□□□ -2.35
ERCC4Q92889 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.35□□□□□ -2.35
ERCC4Q92889 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
ERCC4Q92889 MIR203A-201ENST00000384836 110 ntBASIC0.34□□□□□ -2.36
ERCC4Q92889 RNU6-175P-201ENST00000516896 107 ntBASIC0.34□□□□□ -2.36
ERCC4Q92889 AC084368.1-201ENST00000620935 65 ntBASIC0.34□□□□□ -2.36
ERCC4Q92889 MIR4315-1-201ENST00000636800 73 ntBASIC0.34□□□□□ -2.36
ERCC4Q92889 MIR4315-2-201ENST00000640925 73 ntBASIC0.34□□□□□ -2.36
ERCC4Q92889 Y_RNA.250-201ENST00000364542 110 ntBASIC0.33□□□□□ -2.36
ERCC4Q92889 MIR548H2-201ENST00000408874 88 ntBASIC0.33□□□□□ -2.36
ERCC4Q92889 Y_RNA.633-201ENST00000459107 95 ntBASIC0.33□□□□□ -2.36
ERCC4Q92889 Y_RNA.681-201ENST00000516445 113 ntBASIC0.33□□□□□ -2.36
ERCC4Q92889 MIR664A-201ENST00000626086 82 ntBASIC0.33□□□□□ -2.36
ERCC4Q92889 SNORA75.1-201ENST00000391130 148 ntBASIC0.32□□□□□ -2.36
ERCC4Q92889 MIR1197-201ENST00000408818 88 ntBASIC0.32□□□□□ -2.36
ERCC4Q92889 Y_RNA.68-201ENST00000362881 102 ntBASIC0.31□□□□□ -2.36
ERCC4Q92889 SNORA63.6-201ENST00000364921 119 ntBASIC0.31□□□□□ -2.36
ERCC4Q92889 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
ERCC4Q92889 RNU6-523P-201ENST00000516304 54 ntBASIC0.31□□□□□ -2.36
ERCC4Q92889 RNU6-70P-201ENST00000516438 60 ntBASIC0.31□□□□□ -2.36
ERCC4Q92889 AC023932.2-201ENST00000603176 175 ntBASIC0.31□□□□□ -2.36
ERCC4Q92889 RN7SL660P-201ENST00000614852 299 ntBASIC0.31□□□□□ -2.36
ERCC4Q92889 MIR4662A-201ENST00000637499 67 ntBASIC0.31□□□□□ -2.36
ERCC4Q92889 SCARNA11.2-201ENST00000517183 154 ntBASIC0.3□□□□□ -2.36
ERCC4Q92889 MIR4514-201ENST00000581410 57 ntBASIC0.3□□□□□ -2.36
ERCC4Q92889 MIR6739-201ENST00000622461 75 ntBASIC0.3□□□□□ -2.36
ERCC4Q92889 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.3□□□□□ -2.36
ERCC4Q92889 SNORA42.1-201ENST00000363515 137 ntBASIC0.29□□□□□ -2.36
ERCC4Q92889 RNU6-776P-201ENST00000364403 104 ntBASIC0.29□□□□□ -2.36
ERCC4Q92889 RNU6-1022P-201ENST00000365049 104 ntBASIC0.29□□□□□ -2.36
ERCC4Q92889 RNA5SP63-201ENST00000391225 112 ntBASIC0.29□□□□□ -2.36
ERCC4Q92889 RNU6-687P-201ENST00000516443 89 ntBASIC0.29□□□□□ -2.36
ERCC4Q92889 RNU6-411P-201ENST00000384451 107 ntBASIC0.28□□□□□ -2.36
ERCC4Q92889 MIR106A-201ENST00000384870 81 ntBASIC0.28□□□□□ -2.36
ERCC4Q92889 SNORA49-201ENST00000386157 136 ntBASIC0.28□□□□□ -2.36
ERCC4Q92889 SNORD45.1-201ENST00000363181 77 ntBASIC0.27□□□□□ -2.37
ERCC4Q92889 RNU6-1241P-201ENST00000384536 107 ntBASIC0.27□□□□□ -2.37
ERCC4Q92889 RNU6-587P-201ENST00000391282 106 ntBASIC0.27□□□□□ -2.37
ERCC4Q92889 SNORD2-201ENST00000459163 69 ntBASIC0.27□□□□□ -2.37
ERCC4Q92889 MIR5093-201ENST00000583199 100 ntBASIC0.27□□□□□ -2.37
ERCC4Q92889 MIR4743-201ENST00000584576 69 ntBASIC0.27□□□□□ -2.37
ERCC4Q92889 SNORD115-22-201ENST00000364456 82 ntBASIC0.26□□□□□ -2.37
ERCC4Q92889 AC021146.9-201ENST00000512503 156 ntBASIC0.26□□□□□ -2.37
ERCC4Q92889 MIR8053-201ENST00000613344 75 ntBASIC0.26□□□□□ -2.37
ERCC4Q92889 MIR643-201ENST00000385267 97 ntBASIC0.25□□□□□ -2.37
ERCC4Q92889 RNU6-604P-201ENST00000390917 100 ntBASIC0.25□□□□□ -2.37
ERCC4Q92889 RNA5SP147-201ENST00000516493 109 ntBASIC0.25□□□□□ -2.37
ERCC4Q92889 RNU6-1015P-201ENST00000517121 99 ntBASIC0.25□□□□□ -2.37
ERCC4Q92889 SNORA15B-2-201ENST00000384058 135 ntBASIC0.24□□□□□ -2.37
ERCC4Q92889 SNORA15B-1-201ENST00000384334 135 ntBASIC0.24□□□□□ -2.37
ERCC4Q92889 snoU13.13-201ENST00000458842 104 ntBASIC0.24□□□□□ -2.37
ERCC4Q92889 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.24□□□□□ -2.37
ERCC4Q92889 Y_RNA.545-201ENST00000384652 105 ntBASIC0.23□□□□□ -2.37
ERCC4Q92889 MIR889-201ENST00000401280 79 ntBASIC0.23□□□□□ -2.37
ERCC4Q92889 RNU6-180P-201ENST00000516697 61 ntBASIC0.23□□□□□ -2.37
ERCC4Q92889 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.23□□□□□ -2.37
ERCC4Q92889 RNU6-1296P-201ENST00000383879 107 ntBASIC0.22□□□□□ -2.37
ERCC4Q92889 MIR521-2-201ENST00000384818 87 ntBASIC0.22□□□□□ -2.37
ERCC4Q92889 MIR892B-201ENST00000401279 77 ntBASIC0.22□□□□□ -2.37
ERCC4Q92889 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.22□□□□□ -2.37
ERCC4Q92889 RNU6-1036P-201ENST00000383959 104 ntBASIC0.21□□□□□ -2.38
ERCC4Q92889 Y_RNA.433-201ENST00000384089 102 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 221.2 ms