Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 MIR6773-201ENST00000612812 74 ntBASIC-0.36□□□□□ -2.47
SHROOM3Q8TF72 MIR655-201ENST00000362159 97 ntBASIC-0.37□□□□□ -2.47
SHROOM3Q8TF72 SNORD115-27-201ENST00000364430 82 ntBASIC-0.37□□□□□ -2.47
SHROOM3Q8TF72 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.37□□□□□ -2.47
SHROOM3Q8TF72 AL691482.2-201ENST00000457453 84 ntBASIC-0.37□□□□□ -2.47
SHROOM3Q8TF72 RNU6-274P-201ENST00000459566 107 ntBASIC-0.37□□□□□ -2.47
SHROOM3Q8TF72 RNU6-162P-201ENST00000516228 103 ntBASIC-0.37□□□□□ -2.47
SHROOM3Q8TF72 MIR3657-201ENST00000584818 117 ntBASIC-0.37□□□□□ -2.47
SHROOM3Q8TF72 MIR8064-201ENST00000612863 90 ntBASIC-0.37□□□□□ -2.47
SHROOM3Q8TF72 AC132825.6-201ENST00000638861 357 ntBASIC-0.37□□□□□ -2.47
SHROOM3Q8TF72 RNU6-766P-201ENST00000362478 107 ntBASIC-0.37□□□□□ -2.47
SHROOM3Q8TF72 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.37□□□□□ -2.47
SHROOM3Q8TF72 RNA5SP147-201ENST00000516493 109 ntBASIC-0.37□□□□□ -2.47
SHROOM3Q8TF72 RNA5SP66-201ENST00000517178 101 ntBASIC-0.37□□□□□ -2.47
SHROOM3Q8TF72 MIR6851-201ENST00000617060 67 ntBASIC-0.37□□□□□ -2.47
SHROOM3Q8TF72 MIR6739-201ENST00000622461 75 ntBASIC-0.37□□□□□ -2.47
SHROOM3Q8TF72 snoR1.1-201ENST00000628177 80 ntBASIC-0.37□□□□□ -2.47
SHROOM3Q8TF72 SNORD114-14-201ENST00000362723 75 ntBASIC-0.38□□□□□ -2.47
SHROOM3Q8TF72 SNORA40.17-201ENST00000517256 115 ntBASIC-0.38□□□□□ -2.47
SHROOM3Q8TF72 MIR4436A-201ENST00000585278 85 ntBASIC-0.38□□□□□ -2.47
SHROOM3Q8TF72 SNORA63.6-201ENST00000364921 119 ntBASIC-0.39□□□□□ -2.47
SHROOM3Q8TF72 RNU6-900P-201ENST00000384498 102 ntBASIC-0.39□□□□□ -2.47
SHROOM3Q8TF72 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.39□□□□□ -2.47
SHROOM3Q8TF72 MTATP8P2-201ENST00000435212 202 ntBASIC-0.39□□□□□ -2.47
SHROOM3Q8TF72 AC021146.9-201ENST00000512503 156 ntBASIC-0.39□□□□□ -2.47
SHROOM3Q8TF72 SNORD22.1-201ENST00000516331 125 ntBASIC-0.39□□□□□ -2.47
SHROOM3Q8TF72 SNORA40.13-201ENST00000516379 120 ntBASIC-0.39□□□□□ -2.47
SHROOM3Q8TF72 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.39□□□□□ -2.47
SHROOM3Q8TF72 AL445193.1-201ENST00000441183 141 ntBASIC-0.39□□□□□ -2.47
SHROOM3Q8TF72 MIR8068-201ENST00000618032 68 ntBASIC-0.39□□□□□ -2.47
SHROOM3Q8TF72 SNORD115-25-201ENST00000362619 82 ntBASIC-0.4□□□□□ -2.47
SHROOM3Q8TF72 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.4□□□□□ -2.47
SHROOM3Q8TF72 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.4□□□□□ -2.47
SHROOM3Q8TF72 SNORA3B-201ENST00000391305 131 ntBASIC-0.4□□□□□ -2.47
SHROOM3Q8TF72 AL031737.1-201ENST00000450125 223 ntBASIC-0.4□□□□□ -2.47
SHROOM3Q8TF72 RNU7-55P-201ENST00000459426 62 ntBASIC-0.4□□□□□ -2.47
SHROOM3Q8TF72 MIR4280-201ENST00000582178 76 ntBASIC-0.4□□□□□ -2.47
SHROOM3Q8TF72 MIR4773-1-201ENST00000637203 78 ntBASIC-0.4□□□□□ -2.47
SHROOM3Q8TF72 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.41□□□□□ -2.47
SHROOM3Q8TF72 AL606753.1-201ENST00000427435 87 ntBASIC-0.41□□□□□ -2.47
SHROOM3Q8TF72 MIR5704-201ENST00000584029 77 ntBASIC-0.41□□□□□ -2.47
SHROOM3Q8TF72 AC104996.3-201ENST00000590718 94 ntBASIC-0.41□□□□□ -2.47
SHROOM3Q8TF72 MIR548AZ-201ENST00000616567 95 ntBASIC-0.41□□□□□ -2.47
SHROOM3Q8TF72 AP001318.4-201ENST00000616637 121 ntBASIC-0.41□□□□□ -2.47
SHROOM3Q8TF72 SNORA63.4-201ENST00000362763 126 ntBASIC-0.41□□□□□ -2.48
SHROOM3Q8TF72 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.41□□□□□ -2.48
SHROOM3Q8TF72 RNU6-990P-201ENST00000364385 104 ntBASIC-0.41□□□□□ -2.48
SHROOM3Q8TF72 RNU6-260P-201ENST00000384092 107 ntBASIC-0.41□□□□□ -2.48
SHROOM3Q8TF72 SNORA24B-201ENST00000384176 131 ntBASIC-0.41□□□□□ -2.48
SHROOM3Q8TF72 RNU6-337P-201ENST00000391243 106 ntBASIC-0.41□□□□□ -2.48
SHROOM3Q8TF72 RNU6-284P-201ENST00000411105 106 ntBASIC-0.41□□□□□ -2.48
SHROOM3Q8TF72 RNU6-681P-201ENST00000364012 104 ntBASIC-0.42□□□□□ -2.48
SHROOM3Q8TF72 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.42□□□□□ -2.48
SHROOM3Q8TF72 RNU6-382P-201ENST00000365181 106 ntBASIC-0.43□□□□□ -2.48
SHROOM3Q8TF72 AL035461.1-201ENST00000421490 332 ntBASIC-0.43□□□□□ -2.48
SHROOM3Q8TF72 AC145423.2-201ENST00000610631 239 ntBASIC-0.43□□□□□ -2.48
SHROOM3Q8TF72 RNU6-208P-201ENST00000362431 107 ntBASIC-0.43□□□□□ -2.48
SHROOM3Q8TF72 RNU6-824P-201ENST00000363724 104 ntBASIC-0.43□□□□□ -2.48
SHROOM3Q8TF72 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.43□□□□□ -2.48
SHROOM3Q8TF72 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.43□□□□□ -2.48
SHROOM3Q8TF72 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.43□□□□□ -2.48
SHROOM3Q8TF72 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.43□□□□□ -2.48
SHROOM3Q8TF72 RNU6-479P-201ENST00000516348 105 ntBASIC-0.43□□□□□ -2.48
SHROOM3Q8TF72 SNORD38.3-201ENST00000516599 73 ntBASIC-0.43□□□□□ -2.48
SHROOM3Q8TF72 MIR3179-1-201ENST00000578940 84 ntBASIC-0.43□□□□□ -2.48
SHROOM3Q8TF72 MIR3179-2-201ENST00000579107 84 ntBASIC-0.43□□□□□ -2.48
SHROOM3Q8TF72 MIR3179-3-201ENST00000579566 84 ntBASIC-0.43□□□□□ -2.48
SHROOM3Q8TF72 MIR3179-4-201ENST00000617599 84 ntBASIC-0.43□□□□□ -2.48
SHROOM3Q8TF72 AC090617.8-201ENST00000623339 167 ntBASIC-0.43□□□□□ -2.48
SHROOM3Q8TF72 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.44□□□□□ -2.48
SHROOM3Q8TF72 SNORA33.1-201ENST00000364957 130 ntBASIC-0.44□□□□□ -2.48
SHROOM3Q8TF72 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.44□□□□□ -2.48
SHROOM3Q8TF72 MIR1236-201ENST00000408340 102 ntBASIC-0.44□□□□□ -2.48
SHROOM3Q8TF72 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.44□□□□□ -2.48
SHROOM3Q8TF72 AC026421.1-201ENST00000519101 163 ntBASIC-0.44□□□□□ -2.48
SHROOM3Q8TF72 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.44□□□□□ -2.48
SHROOM3Q8TF72 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.44□□□□□ -2.48
SHROOM3Q8TF72 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.44□□□□□ -2.48
SHROOM3Q8TF72 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.45□□□□□ -2.48
SHROOM3Q8TF72 SNORD115-23-201ENST00000364461 82 ntBASIC-0.45□□□□□ -2.48
SHROOM3Q8TF72 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.45□□□□□ -2.48
SHROOM3Q8TF72 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.45□□□□□ -2.48
SHROOM3Q8TF72 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.45□□□□□ -2.48
SHROOM3Q8TF72 SNORA13-201ENST00000458790 133 ntBASIC-0.45□□□□□ -2.48
SHROOM3Q8TF72 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.45□□□□□ -2.48
SHROOM3Q8TF72 RNU6-624P-201ENST00000363411 107 ntBASIC-0.45□□□□□ -2.48
SHROOM3Q8TF72 RNU6-109P-201ENST00000516364 107 ntBASIC-0.45□□□□□ -2.48
SHROOM3Q8TF72 RNU6-184P-201ENST00000516514 107 ntBASIC-0.45□□□□□ -2.48
SHROOM3Q8TF72 SNORD116-22-201ENST00000384430 92 ntBASIC-0.46□□□□□ -2.48
SHROOM3Q8TF72 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.46□□□□□ -2.48
SHROOM3Q8TF72 MIR204-201ENST00000385200 110 ntBASIC-0.46□□□□□ -2.48
SHROOM3Q8TF72 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.46□□□□□ -2.48
SHROOM3Q8TF72 MIR1302-5-201ENST00000408164 150 ntBASIC-0.46□□□□□ -2.48
SHROOM3Q8TF72 SNORD75.1-201ENST00000408373 60 ntBASIC-0.46□□□□□ -2.48
SHROOM3Q8TF72 YWHAEP3-201ENST00000582767 121 ntBASIC-0.46□□□□□ -2.48
SHROOM3Q8TF72 AC006254.2-201ENST00000603259 279 ntBASIC-0.46□□□□□ -2.48
SHROOM3Q8TF72 SNORD114-3-201ENST00000364969 75 ntBASIC-0.46□□□□□ -2.48
SHROOM3Q8TF72 RNU6-81P-201ENST00000365608 104 ntBASIC-0.46□□□□□ -2.48
SHROOM3Q8TF72 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.46□□□□□ -2.48
SHROOM3Q8TF72 AC006160.2-201ENST00000637708 154 ntBASIC-0.46□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 287.9 ms