Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
HIPK4Q8NE63 RNU6-70P-201ENST00000516438 60 ntBASIC0.38□□□□□ -2.35
HIPK4Q8NE63 AC084368.1-201ENST00000620935 65 ntBASIC0.38□□□□□ -2.35
HIPK4Q8NE63 AC243829.3-201ENST00000622177 108 ntBASIC0.38□□□□□ -2.35
HIPK4Q8NE63 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.38□□□□□ -2.35
HIPK4Q8NE63 MIR20A-201ENST00000362279 71 ntBASIC0.37□□□□□ -2.35
HIPK4Q8NE63 SNORD114-29-201ENST00000364819 70 ntBASIC0.37□□□□□ -2.35
HIPK4Q8NE63 MIR876-201ENST00000401147 81 ntBASIC0.37□□□□□ -2.35
HIPK4Q8NE63 AC244090.1-201ENST00000441884 93 ntBASIC0.37□□□□□ -2.35
HIPK4Q8NE63 MIR4662A-201ENST00000637499 67 ntBASIC0.37□□□□□ -2.35
HIPK4Q8NE63 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.36□□□□□ -2.35
HIPK4Q8NE63 AC022709.1-201ENST00000615967 87 ntBASIC0.36□□□□□ -2.35
HIPK4Q8NE63 RNU6-523P-201ENST00000516304 54 ntBASIC0.35□□□□□ -2.35
HIPK4Q8NE63 RNA5SP147-201ENST00000516493 109 ntBASIC0.35□□□□□ -2.35
HIPK4Q8NE63 RNU6-175P-201ENST00000516896 107 ntBASIC0.35□□□□□ -2.35
HIPK4Q8NE63 MIR6515-201ENST00000619843 57 ntBASIC0.35□□□□□ -2.35
HIPK4Q8NE63 SNORD45.1-201ENST00000363181 77 ntBASIC0.34□□□□□ -2.36
HIPK4Q8NE63 SNORA63.6-201ENST00000364921 119 ntBASIC0.34□□□□□ -2.36
HIPK4Q8NE63 RNU6-411P-201ENST00000384451 107 ntBASIC0.34□□□□□ -2.36
HIPK4Q8NE63 RNU6-1241P-201ENST00000384536 107 ntBASIC0.34□□□□□ -2.36
HIPK4Q8NE63 RNU6-604P-201ENST00000390917 100 ntBASIC0.34□□□□□ -2.36
HIPK4Q8NE63 RNU6-687P-201ENST00000516443 89 ntBASIC0.34□□□□□ -2.36
HIPK4Q8NE63 RNU6-782P-201ENST00000516852 104 ntBASIC0.34□□□□□ -2.36
HIPK4Q8NE63 AC243829.6-201ENST00000612652 106 ntBASIC0.34□□□□□ -2.36
HIPK4Q8NE63 RN7SL660P-201ENST00000614852 299 ntBASIC0.34□□□□□ -2.36
HIPK4Q8NE63 RNU6-587P-201ENST00000391282 106 ntBASIC0.33□□□□□ -2.36
HIPK4Q8NE63 MIR936-201ENST00000401264 98 ntBASIC0.33□□□□□ -2.36
HIPK4Q8NE63 snoU13.13-201ENST00000458842 104 ntBASIC0.33□□□□□ -2.36
HIPK4Q8NE63 snoU13.18-201ENST00000459483 104 ntBASIC0.33□□□□□ -2.36
HIPK4Q8NE63 RNA5SP134-201ENST00000516492 96 ntBASIC0.33□□□□□ -2.36
HIPK4Q8NE63 SCARNA11.2-201ENST00000517183 154 ntBASIC0.33□□□□□ -2.36
HIPK4Q8NE63 SNORA75.1-201ENST00000391130 148 ntBASIC0.32□□□□□ -2.36
HIPK4Q8NE63 Y_RNA.633-201ENST00000459107 95 ntBASIC0.32□□□□□ -2.36
HIPK4Q8NE63 AC021146.9-201ENST00000512503 156 ntBASIC0.32□□□□□ -2.36
HIPK4Q8NE63 RNU6-1015P-201ENST00000517121 99 ntBASIC0.32□□□□□ -2.36
HIPK4Q8NE63 SNORD115-22-201ENST00000364456 82 ntBASIC0.31□□□□□ -2.36
HIPK4Q8NE63 Y_RNA.250-201ENST00000364542 110 ntBASIC0.31□□□□□ -2.36
HIPK4Q8NE63 MIR643-201ENST00000385267 97 ntBASIC0.31□□□□□ -2.36
HIPK4Q8NE63 MIR548H2-201ENST00000408874 88 ntBASIC0.31□□□□□ -2.36
HIPK4Q8NE63 MIR4711-201ENST00000578274 70 ntBASIC0.31□□□□□ -2.36
HIPK4Q8NE63 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.31□□□□□ -2.36
HIPK4Q8NE63 MIR4315-1-201ENST00000636800 73 ntBASIC0.31□□□□□ -2.36
HIPK4Q8NE63 MIR4315-2-201ENST00000640925 73 ntBASIC0.31□□□□□ -2.36
HIPK4Q8NE63 SNORA49-201ENST00000386157 136 ntBASIC0.3□□□□□ -2.36
HIPK4Q8NE63 RNA5SP436-201ENST00000516020 115 ntBASIC0.3□□□□□ -2.36
HIPK4Q8NE63 Y_RNA.355-201ENST00000365462 98 ntBASIC0.29□□□□□ -2.36
HIPK4Q8NE63 Y_RNA.545-201ENST00000384652 105 ntBASIC0.29□□□□□ -2.36
HIPK4Q8NE63 MIR8053-201ENST00000613344 75 ntBASIC0.29□□□□□ -2.36
HIPK4Q8NE63 MIR6739-201ENST00000622461 75 ntBASIC0.29□□□□□ -2.36
HIPK4Q8NE63 VTRNA1-3-201ENST00000365645 89 ntBASIC0.28□□□□□ -2.36
HIPK4Q8NE63 RNU6-1296P-201ENST00000383879 107 ntBASIC0.28□□□□□ -2.36
HIPK4Q8NE63 MIR598-201ENST00000384868 97 ntBASIC0.28□□□□□ -2.36
HIPK4Q8NE63 MIR154-201ENST00000385243 84 ntBASIC0.28□□□□□ -2.36
HIPK4Q8NE63 SNORD115-31-201ENST00000365318 82 ntBASIC0.27□□□□□ -2.37
HIPK4Q8NE63 SNORD45A-201ENST00000384512 84 ntBASIC0.27□□□□□ -2.37
HIPK4Q8NE63 Y_RNA.565-201ENST00000384719 101 ntBASIC0.27□□□□□ -2.37
HIPK4Q8NE63 RNU6-1036P-201ENST00000383959 104 ntBASIC0.26□□□□□ -2.37
HIPK4Q8NE63 RNA5SP193-201ENST00000410353 107 ntBASIC0.26□□□□□ -2.37
HIPK4Q8NE63 SNORA42.1-201ENST00000363515 137 ntBASIC0.25□□□□□ -2.37
HIPK4Q8NE63 MIR106A-201ENST00000384870 81 ntBASIC0.25□□□□□ -2.37
HIPK4Q8NE63 RNU6-634P-201ENST00000459134 106 ntBASIC0.25□□□□□ -2.37
HIPK4Q8NE63 RNU6-982P-201ENST00000516216 102 ntBASIC0.25□□□□□ -2.37
HIPK4Q8NE63 SNORD113.1-201ENST00000363280 73 ntBASIC0.24□□□□□ -2.37
HIPK4Q8NE63 SNORD114-23-201ENST00000363536 72 ntBASIC0.24□□□□□ -2.37
HIPK4Q8NE63 RNA5SP325-201ENST00000363756 130 ntBASIC0.24□□□□□ -2.37
HIPK4Q8NE63 SNORA15B-2-201ENST00000384058 135 ntBASIC0.24□□□□□ -2.37
HIPK4Q8NE63 SNORA15B-1-201ENST00000384334 135 ntBASIC0.24□□□□□ -2.37
HIPK4Q8NE63 MIR521-2-201ENST00000384818 87 ntBASIC0.24□□□□□ -2.37
HIPK4Q8NE63 SNORD2-201ENST00000459163 69 ntBASIC0.24□□□□□ -2.37
HIPK4Q8NE63 RNU6-656P-201ENST00000516785 107 ntBASIC0.24□□□□□ -2.37
HIPK4Q8NE63 RNU6-645P-201ENST00000364649 106 ntBASIC0.23□□□□□ -2.37
HIPK4Q8NE63 SNORA33.1-201ENST00000364957 130 ntBASIC0.23□□□□□ -2.37
HIPK4Q8NE63 RNU6-881P-201ENST00000516813 102 ntBASIC0.23□□□□□ -2.37
HIPK4Q8NE63 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
HIPK4Q8NE63 AC104408.1-201ENST00000605241 170 ntBASIC0.23□□□□□ -2.37
HIPK4Q8NE63 Y_RNA.118-201ENST00000363300 101 ntBASIC0.22□□□□□ -2.37
HIPK4Q8NE63 RNU6-1162P-201ENST00000384443 104 ntBASIC0.22□□□□□ -2.37
HIPK4Q8NE63 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.22□□□□□ -2.37
HIPK4Q8NE63 MIR6514-201ENST00000622549 70 ntBASIC0.21□□□□□ -2.38
HIPK4Q8NE63 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
HIPK4Q8NE63 RNA5SP214-201ENST00000363378 118 ntBASIC0.2□□□□□ -2.38
HIPK4Q8NE63 MIR610-201ENST00000385139 96 ntBASIC0.2□□□□□ -2.38
HIPK4Q8NE63 RNA5SP163-201ENST00000410304 99 ntBASIC0.2□□□□□ -2.38
HIPK4Q8NE63 RNU6-180P-201ENST00000516697 61 ntBASIC0.2□□□□□ -2.38
HIPK4Q8NE63 MIR4743-201ENST00000584576 69 ntBASIC0.2□□□□□ -2.38
HIPK4Q8NE63 RNU6-540P-201ENST00000384622 101 ntBASIC0.19□□□□□ -2.38
HIPK4Q8NE63 MIR593-201ENST00000384856 100 ntBASIC0.19□□□□□ -2.38
HIPK4Q8NE63 MIR892B-201ENST00000401279 77 ntBASIC0.19□□□□□ -2.38
HIPK4Q8NE63 CR383656.4-201ENST00000546909 122 ntBASIC0.19□□□□□ -2.38
HIPK4Q8NE63 SNORD114-9-201ENST00000364370 72 ntBASIC0.18□□□□□ -2.38
HIPK4Q8NE63 MIR145-201ENST00000384967 88 ntBASIC0.18□□□□□ -2.38
HIPK4Q8NE63 RNU6-871P-201ENST00000516122 100 ntBASIC0.18□□□□□ -2.38
HIPK4Q8NE63 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.18□□□□□ -2.38
HIPK4Q8NE63 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.18□□□□□ -2.38
HIPK4Q8NE63 AC090617.8-201ENST00000623339 167 ntBASIC0.18□□□□□ -2.38
HIPK4Q8NE63 U6.96-201ENST00000636425 70 ntBASIC0.18□□□□□ -2.38
HIPK4Q8NE63 AC010487.4-201ENST00000637027 61 ntBASIC0.18□□□□□ -2.38
HIPK4Q8NE63 SNORD115-25-201ENST00000362619 82 ntBASIC0.17□□□□□ -2.38
HIPK4Q8NE63 RNU6-895P-201ENST00000384125 103 ntBASIC0.17□□□□□ -2.38
HIPK4Q8NE63 SNORD116-24-201ENST00000384549 92 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 412 ms