Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 SNORA26.4-201ENST00000391188 123 ntBASIC-1.18□□□□□ -2.6
ZIC4Q8N9L1 SNORD63.1-201ENST00000516178 80 ntBASIC-1.18□□□□□ -2.6
ZIC4Q8N9L1 RNA5SP147-201ENST00000516493 109 ntBASIC-1.18□□□□□ -2.6
ZIC4Q8N9L1 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.18□□□□□ -2.6
ZIC4Q8N9L1 CYP3A54P-201ENST00000566950 75 ntBASIC-1.18□□□□□ -2.6
ZIC4Q8N9L1 MIR3657-201ENST00000584818 117 ntBASIC-1.18□□□□□ -2.6
ZIC4Q8N9L1 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.18□□□□□ -2.6
ZIC4Q8N9L1 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.19□□□□□ -2.6
ZIC4Q8N9L1 SNORD45B-201ENST00000364617 72 ntBASIC-1.19□□□□□ -2.6
ZIC4Q8N9L1 SNORD114-3-201ENST00000364969 75 ntBASIC-1.19□□□□□ -2.6
ZIC4Q8N9L1 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.19□□□□□ -2.6
ZIC4Q8N9L1 MIR203A-201ENST00000384836 110 ntBASIC-1.19□□□□□ -2.6
ZIC4Q8N9L1 MIR889-201ENST00000401280 79 ntBASIC-1.19□□□□□ -2.6
ZIC4Q8N9L1 AL118496.2-201ENST00000448300 230 ntBASIC-1.19□□□□□ -2.6
ZIC4Q8N9L1 RNA5SP272-201ENST00000516095 111 ntBASIC-1.19□□□□□ -2.6
ZIC4Q8N9L1 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-1.19□□□□□ -2.6
ZIC4Q8N9L1 MIR4520-1-201ENST00000582609 70 ntBASIC-1.19□□□□□ -2.6
ZIC4Q8N9L1 MIR4777-201ENST00000583710 86 ntBASIC-1.19□□□□□ -2.6
ZIC4Q8N9L1 MIR548Z-201ENST00000584743 97 ntBASIC-1.19□□□□□ -2.6
ZIC4Q8N9L1 SNORD115-33-201ENST00000363723 82 ntBASIC-1.2□□□□□ -2.6
ZIC4Q8N9L1 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.2□□□□□ -2.6
ZIC4Q8N9L1 MIR548I1-201ENST00000408810 149 ntBASIC-1.2□□□□□ -2.6
ZIC4Q8N9L1 RNU6-519P-201ENST00000410590 108 ntBASIC-1.2□□□□□ -2.6
ZIC4Q8N9L1 MIR6509-201ENST00000614603 85 ntBASIC-1.2□□□□□ -2.6
ZIC4Q8N9L1 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.2□□□□□ -2.6
ZIC4Q8N9L1 MIR6818-201ENST00000621576 65 ntBASIC-1.2□□□□□ -2.6
ZIC4Q8N9L1 RNU6-924P-201ENST00000362926 108 ntBASIC-1.21□□□□□ -2.6
ZIC4Q8N9L1 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.21□□□□□ -2.6
ZIC4Q8N9L1 SNORD115-22-201ENST00000364456 82 ntBASIC-1.21□□□□□ -2.6
ZIC4Q8N9L1 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.21□□□□□ -2.6
ZIC4Q8N9L1 MTATP6P29-201ENST00000415057 132 ntBASIC-1.21□□□□□ -2.6
ZIC4Q8N9L1 MTND3P2-201ENST00000438452 342 ntBASIC-1.21□□□□□ -2.6
ZIC4Q8N9L1 RNU6-983P-201ENST00000516004 103 ntBASIC-1.21□□□□□ -2.6
ZIC4Q8N9L1 MIR4503-201ENST00000582187 83 ntBASIC-1.21□□□□□ -2.6
ZIC4Q8N9L1 MIR4773-1-201ENST00000637203 78 ntBASIC-1.21□□□□□ -2.6
ZIC4Q8N9L1 RNY4P27-201ENST00000363341 96 ntBASIC-1.22□□□□□ -2.6
ZIC4Q8N9L1 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.22□□□□□ -2.6
ZIC4Q8N9L1 RNU6-772P-201ENST00000516042 105 ntBASIC-1.22□□□□□ -2.6
ZIC4Q8N9L1 AP001094.1-201ENST00000579805 193 ntBASIC-1.22□□□□□ -2.6
ZIC4Q8N9L1 U6.81-201ENST00000612550 106 ntBASIC-1.22□□□□□ -2.6
ZIC4Q8N9L1 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.22□□□□□ -2.6
ZIC4Q8N9L1 MIR6502-201ENST00000617296 76 ntBASIC-1.22□□□□□ -2.6
ZIC4Q8N9L1 RNU6-804P-201ENST00000384286 107 ntBASIC-1.23□□□□□ -2.61
ZIC4Q8N9L1 RNU7-154P-201ENST00000516194 62 ntBASIC-1.23□□□□□ -2.61
ZIC4Q8N9L1 MIR5009-201ENST00000578736 100 ntBASIC-1.23□□□□□ -2.61
ZIC4Q8N9L1 RNU6-200P-201ENST00000364743 107 ntBASIC-1.24□□□□□ -2.61
ZIC4Q8N9L1 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.24□□□□□ -2.61
ZIC4Q8N9L1 MIR521-2-201ENST00000384818 87 ntBASIC-1.24□□□□□ -2.61
ZIC4Q8N9L1 AC012531.4-201ENST00000616509 177 ntBASIC-1.24□□□□□ -2.61
ZIC4Q8N9L1 RNA5SP26-201ENST00000362406 119 ntBASIC-1.25□□□□□ -2.61
ZIC4Q8N9L1 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.25□□□□□ -2.61
ZIC4Q8N9L1 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.25□□□□□ -2.61
ZIC4Q8N9L1 SNORA63-201ENST00000363450 132 ntBASIC-1.25□□□□□ -2.61
ZIC4Q8N9L1 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.25□□□□□ -2.61
ZIC4Q8N9L1 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.25□□□□□ -2.61
ZIC4Q8N9L1 MIR519A2-201ENST00000384990 87 ntBASIC-1.25□□□□□ -2.61
ZIC4Q8N9L1 MIR527-201ENST00000385244 85 ntBASIC-1.25□□□□□ -2.61
ZIC4Q8N9L1 Y_RNA.604-201ENST00000410574 102 ntBASIC-1.25□□□□□ -2.61
ZIC4Q8N9L1 RNU2-51P-201ENST00000410708 197 ntBASIC-1.25□□□□□ -2.61
ZIC4Q8N9L1 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.25□□□□□ -2.61
ZIC4Q8N9L1 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.25□□□□□ -2.61
ZIC4Q8N9L1 RNU6-732P-201ENST00000516033 103 ntBASIC-1.25□□□□□ -2.61
ZIC4Q8N9L1 RNU6-795P-201ENST00000516323 103 ntBASIC-1.25□□□□□ -2.61
ZIC4Q8N9L1 MIR3144-201ENST00000579460 79 ntBASIC-1.25□□□□□ -2.61
ZIC4Q8N9L1 MIR4723-201ENST00000585070 81 ntBASIC-1.25□□□□□ -2.61
ZIC4Q8N9L1 RNU5F-1-201ENST00000362507 117 ntBASIC-1.26□□□□□ -2.61
ZIC4Q8N9L1 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.26□□□□□ -2.61
ZIC4Q8N9L1 MTND4LP9-201ENST00000427694 174 ntBASIC-1.26□□□□□ -2.61
ZIC4Q8N9L1 AL691482.2-201ENST00000457453 84 ntBASIC-1.26□□□□□ -2.61
ZIC4Q8N9L1 RNU6-426P-201ENST00000516464 97 ntBASIC-1.26□□□□□ -2.61
ZIC4Q8N9L1 AL157777.2-201ENST00000258070 137 ntBASIC-1.27□□□□□ -2.61
ZIC4Q8N9L1 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.27□□□□□ -2.61
ZIC4Q8N9L1 SNORD18.1-201ENST00000363807 70 ntBASIC-1.27□□□□□ -2.61
ZIC4Q8N9L1 RNU6-574P-201ENST00000384265 107 ntBASIC-1.27□□□□□ -2.61
ZIC4Q8N9L1 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.27□□□□□ -2.61
ZIC4Q8N9L1 AC004792.1-201ENST00000614523 137 ntBASIC-1.27□□□□□ -2.61
ZIC4Q8N9L1 MIR6739-201ENST00000622461 75 ntBASIC-1.27□□□□□ -2.61
ZIC4Q8N9L1 SNORD58A-201ENST00000383875 65 ntBASIC-1.28□□□□□ -2.61
ZIC4Q8N9L1 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.28□□□□□ -2.61
ZIC4Q8N9L1 RNA5SP86-201ENST00000390869 98 ntBASIC-1.28□□□□□ -2.61
ZIC4Q8N9L1 RNU6-327P-201ENST00000516270 127 ntBASIC-1.28□□□□□ -2.61
ZIC4Q8N9L1 MTND5P41-201ENST00000517498 206 ntBASIC-1.28□□□□□ -2.61
ZIC4Q8N9L1 MIR548AG1-201ENST00000579932 66 ntBASIC-1.28□□□□□ -2.61
ZIC4Q8N9L1 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.29□□□□□ -2.62
ZIC4Q8N9L1 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.29□□□□□ -2.62
ZIC4Q8N9L1 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.29□□□□□ -2.62
ZIC4Q8N9L1 RNU6-880P-201ENST00000384526 107 ntBASIC-1.29□□□□□ -2.62
ZIC4Q8N9L1 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.29□□□□□ -2.62
ZIC4Q8N9L1 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.29□□□□□ -2.62
ZIC4Q8N9L1 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.3□□□□□ -2.62
ZIC4Q8N9L1 RNU6-196P-201ENST00000384315 107 ntBASIC-1.3□□□□□ -2.62
ZIC4Q8N9L1 RNU6-576P-201ENST00000390854 102 ntBASIC-1.3□□□□□ -2.62
ZIC4Q8N9L1 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.3□□□□□ -2.62
ZIC4Q8N9L1 AL353691.2-201ENST00000443795 59 ntBASIC-1.3□□□□□ -2.62
ZIC4Q8N9L1 RNU7-107P-201ENST00000459121 61 ntBASIC-1.3□□□□□ -2.62
ZIC4Q8N9L1 RNU6-518P-201ENST00000516056 96 ntBASIC-1.3□□□□□ -2.62
ZIC4Q8N9L1 RNU6-412P-201ENST00000516434 106 ntBASIC-1.3□□□□□ -2.62
ZIC4Q8N9L1 AP002795.1-201ENST00000534879 84 ntBASIC-1.3□□□□□ -2.62
ZIC4Q8N9L1 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.31□□□□□ -2.62
ZIC4Q8N9L1 RNU6-80P-201ENST00000384195 107 ntBASIC-1.31□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 202.9 ms