Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 RNU6-229P-201ENST00000516614 102 ntBASIC0.61□□□□□ -2.31
SLC44A3Q8N4M1 MIR5706-201ENST00000579841 80 ntBASIC0.61□□□□□ -2.31
SLC44A3Q8N4M1 MIR3657-201ENST00000584818 117 ntBASIC0.61□□□□□ -2.31
SLC44A3Q8N4M1 MIR6509-201ENST00000614603 85 ntBASIC0.61□□□□□ -2.31
SLC44A3Q8N4M1 RNU6-604P-201ENST00000390917 100 ntBASIC0.6□□□□□ -2.31
SLC44A3Q8N4M1 AC073261.1-201ENST00000429409 121 ntBASIC0.6□□□□□ -2.31
SLC44A3Q8N4M1 Y_RNA.407-201ENST00000383986 113 ntBASIC0.59□□□□□ -2.31
SLC44A3Q8N4M1 MIR4473-201ENST00000583731 91 ntBASIC0.59□□□□□ -2.31
SLC44A3Q8N4M1 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.58□□□□□ -2.32
SLC44A3Q8N4M1 SNORD45.1-201ENST00000363181 77 ntBASIC0.58□□□□□ -2.32
SLC44A3Q8N4M1 RNU6-945P-201ENST00000383947 107 ntBASIC0.58□□□□□ -2.32
SLC44A3Q8N4M1 RNU6-260P-201ENST00000384092 107 ntBASIC0.58□□□□□ -2.32
SLC44A3Q8N4M1 RNU6-540P-201ENST00000384622 101 ntBASIC0.58□□□□□ -2.32
SLC44A3Q8N4M1 MIR203A-201ENST00000384836 110 ntBASIC0.58□□□□□ -2.32
SLC44A3Q8N4M1 MIR154-201ENST00000385243 84 ntBASIC0.58□□□□□ -2.32
SLC44A3Q8N4M1 SNORD71-201ENST00000411292 86 ntBASIC0.58□□□□□ -2.32
SLC44A3Q8N4M1 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.58□□□□□ -2.32
SLC44A3Q8N4M1 SNORA2.1-201ENST00000363089 137 ntBASIC0.57□□□□□ -2.32
SLC44A3Q8N4M1 Y_RNA.125-201ENST00000363371 111 ntBASIC0.57□□□□□ -2.32
SLC44A3Q8N4M1 SNORD114-4-201ENST00000363962 75 ntBASIC0.57□□□□□ -2.32
SLC44A3Q8N4M1 SNORD45A-201ENST00000384512 84 ntBASIC0.57□□□□□ -2.32
SLC44A3Q8N4M1 MIR652-201ENST00000385278 98 ntBASIC0.57□□□□□ -2.32
SLC44A3Q8N4M1 AC139453.2-201ENST00000487255 133 ntBASIC0.57□□□□□ -2.32
SLC44A3Q8N4M1 RNU6-848P-201ENST00000515948 107 ntBASIC0.57□□□□□ -2.32
SLC44A3Q8N4M1 RNU6-617P-201ENST00000516147 107 ntBASIC0.57□□□□□ -2.32
SLC44A3Q8N4M1 RNU6-473P-201ENST00000516164 107 ntBASIC0.57□□□□□ -2.32
SLC44A3Q8N4M1 RNU6-1232P-201ENST00000516299 86 ntBASIC0.57□□□□□ -2.32
SLC44A3Q8N4M1 SCARNA17.3-201ENST00000516381 125 ntBASIC0.57□□□□□ -2.32
SLC44A3Q8N4M1 RNU6-1049P-201ENST00000516414 107 ntBASIC0.57□□□□□ -2.32
SLC44A3Q8N4M1 SNORA62.5-201ENST00000516634 120 ntBASIC0.57□□□□□ -2.32
SLC44A3Q8N4M1 MIR8053-201ENST00000613344 75 ntBASIC0.57□□□□□ -2.32
SLC44A3Q8N4M1 MIR582-201ENST00000365731 98 ntBASIC0.56□□□□□ -2.32
SLC44A3Q8N4M1 AC114801.3-201ENST00000510231 177 ntBASIC0.56□□□□□ -2.32
SLC44A3Q8N4M1 RNU6-871P-201ENST00000516122 100 ntBASIC0.56□□□□□ -2.32
SLC44A3Q8N4M1 MIR6086-201ENST00000638065 55 ntBASIC0.56□□□□□ -2.32
SLC44A3Q8N4M1 MIR501-201ENST00000390204 84 ntBASIC0.55□□□□□ -2.32
SLC44A3Q8N4M1 SNORD113.1-201ENST00000363280 73 ntBASIC0.54□□□□□ -2.32
SLC44A3Q8N4M1 SNORA2A-201ENST00000383885 135 ntBASIC0.54□□□□□ -2.32
SLC44A3Q8N4M1 Y_RNA.423-201ENST00000384057 113 ntBASIC0.54□□□□□ -2.32
SLC44A3Q8N4M1 MIR92A1-201ENST00000385233 78 ntBASIC0.54□□□□□ -2.32
SLC44A3Q8N4M1 MIR548E-201ENST00000408287 88 ntBASIC0.54□□□□□ -2.32
SLC44A3Q8N4M1 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.54□□□□□ -2.32
SLC44A3Q8N4M1 RNA5SP285-201ENST00000516619 119 ntBASIC0.54□□□□□ -2.32
SLC44A3Q8N4M1 RNU6-539P-201ENST00000516665 103 ntBASIC0.54□□□□□ -2.32
SLC44A3Q8N4M1 AC243829.6-201ENST00000612652 106 ntBASIC0.54□□□□□ -2.32
SLC44A3Q8N4M1 SNORD44.1-201ENST00000363202 61 ntBASIC0.53□□□□□ -2.32
SLC44A3Q8N4M1 SNORD116-24-201ENST00000384549 92 ntBASIC0.53□□□□□ -2.32
SLC44A3Q8N4M1 SNORA68.3-201ENST00000515906 83 ntBASIC0.53□□□□□ -2.32
SLC44A3Q8N4M1 RNU6-982P-201ENST00000516216 102 ntBASIC0.53□□□□□ -2.32
SLC44A3Q8N4M1 RNU6-881P-201ENST00000516813 102 ntBASIC0.53□□□□□ -2.32
SLC44A3Q8N4M1 MIR2909-201ENST00000617113 69 ntBASIC0.53□□□□□ -2.32
SLC44A3Q8N4M1 AC114737.2-201ENST00000421583 173 ntBASIC0.52□□□□□ -2.33
SLC44A3Q8N4M1 MIR6739-201ENST00000622461 75 ntBASIC0.52□□□□□ -2.33
SLC44A3Q8N4M1 Y_RNA.633-201ENST00000459107 95 ntBASIC0.51□□□□□ -2.33
SLC44A3Q8N4M1 RNU6-863P-201ENST00000515989 104 ntBASIC0.51□□□□□ -2.33
SLC44A3Q8N4M1 MIR4677-201ENST00000584153 80 ntBASIC0.51□□□□□ -2.33
SLC44A3Q8N4M1 MIR548AD-201ENST00000584780 82 ntBASIC0.51□□□□□ -2.33
SLC44A3Q8N4M1 uc_338.17-201ENST00000619633 179 ntBASIC0.51□□□□□ -2.33
SLC44A3Q8N4M1 Y_RNA.250-201ENST00000364542 110 ntBASIC0.5□□□□□ -2.33
SLC44A3Q8N4M1 VTRNA1-3-201ENST00000365645 89 ntBASIC0.5□□□□□ -2.33
SLC44A3Q8N4M1 RNA5SP147-201ENST00000516493 109 ntBASIC0.5□□□□□ -2.33
SLC44A3Q8N4M1 U7.6-201ENST00000610841 64 ntBASIC0.5□□□□□ -2.33
SLC44A3Q8N4M1 uc_338.10-201ENST00000621872 182 ntBASIC0.5□□□□□ -2.33
SLC44A3Q8N4M1 SNORA63.6-201ENST00000364921 119 ntBASIC0.49□□□□□ -2.33
SLC44A3Q8N4M1 MIR760-201ENST00000390220 80 ntBASIC0.49□□□□□ -2.33
SLC44A3Q8N4M1 RNU6-663P-201ENST00000391105 106 ntBASIC0.49□□□□□ -2.33
SLC44A3Q8N4M1 RNA5SP63-201ENST00000391225 112 ntBASIC0.49□□□□□ -2.33
SLC44A3Q8N4M1 MIR4514-201ENST00000581410 57 ntBASIC0.49□□□□□ -2.33
SLC44A3Q8N4M1 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.48□□□□□ -2.33
SLC44A3Q8N4M1 MIR103A1-201ENST00000362165 78 ntBASIC0.48□□□□□ -2.33
SLC44A3Q8N4M1 MIRLET7D-201ENST00000362263 87 ntBASIC0.48□□□□□ -2.33
SLC44A3Q8N4M1 RNU6-645P-201ENST00000364649 106 ntBASIC0.48□□□□□ -2.33
SLC44A3Q8N4M1 RNA5SP128-201ENST00000365305 116 ntBASIC0.48□□□□□ -2.33
SLC44A3Q8N4M1 Y_RNA.386-201ENST00000383913 105 ntBASIC0.48□□□□□ -2.33
SLC44A3Q8N4M1 AL157398.1-201ENST00000452981 186 ntBASIC0.48□□□□□ -2.33
SLC44A3Q8N4M1 AC021146.9-201ENST00000512503 156 ntBASIC0.48□□□□□ -2.33
SLC44A3Q8N4M1 RNU6-656P-201ENST00000516785 107 ntBASIC0.48□□□□□ -2.33
SLC44A3Q8N4M1 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.48□□□□□ -2.33
SLC44A3Q8N4M1 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
SLC44A3Q8N4M1 RNU6-649P-201ENST00000384463 107 ntBASIC0.47□□□□□ -2.33
SLC44A3Q8N4M1 snoU13.13-201ENST00000458842 104 ntBASIC0.47□□□□□ -2.33
SLC44A3Q8N4M1 U6.111-201ENST00000636093 83 ntBASIC0.47□□□□□ -2.33
SLC44A3Q8N4M1 RNU6-1216P-201ENST00000362590 107 ntBASIC0.46□□□□□ -2.34
SLC44A3Q8N4M1 RNU6-895P-201ENST00000384125 103 ntBASIC0.46□□□□□ -2.34
SLC44A3Q8N4M1 SNORA49-201ENST00000386157 136 ntBASIC0.46□□□□□ -2.34
SLC44A3Q8N4M1 SNORD30.1-201ENST00000391309 70 ntBASIC0.46□□□□□ -2.34
SLC44A3Q8N4M1 AC244090.1-201ENST00000441884 93 ntBASIC0.46□□□□□ -2.34
SLC44A3Q8N4M1 SNORA50A-201ENST00000384225 134 ntBASIC0.45□□□□□ -2.34
SLC44A3Q8N4M1 MIR521-2-201ENST00000384818 87 ntBASIC0.45□□□□□ -2.34
SLC44A3Q8N4M1 MIR516B1-201ENST00000385211 90 ntBASIC0.45□□□□□ -2.34
SLC44A3Q8N4M1 MIR876-201ENST00000401147 81 ntBASIC0.45□□□□□ -2.34
SLC44A3Q8N4M1 RNU6-175P-201ENST00000516896 107 ntBASIC0.45□□□□□ -2.34
SLC44A3Q8N4M1 RNU7-188P-201ENST00000517063 64 ntBASIC0.45□□□□□ -2.34
SLC44A3Q8N4M1 MIR3925-201ENST00000584674 77 ntBASIC0.45□□□□□ -2.34
SLC44A3Q8N4M1 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
SLC44A3Q8N4M1 MIR20A-201ENST00000362279 71 ntBASIC0.44□□□□□ -2.34
SLC44A3Q8N4M1 RNU6-590P-201ENST00000365039 107 ntBASIC0.44□□□□□ -2.34
SLC44A3Q8N4M1 Y_RNA.443-201ENST00000384135 111 ntBASIC0.44□□□□□ -2.34
SLC44A3Q8N4M1 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.44□□□□□ -2.34
SLC44A3Q8N4M1 SNORD114-29-201ENST00000364819 70 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 163.1 ms