Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 MIR521-2-201ENST00000384818 87 ntBASIC0.6□□□□□ -2.31
KRT78Q8N1N4 AC069271.1-201ENST00000445577 156 ntBASIC0.6□□□□□ -2.31
KRT78Q8N1N4 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
KRT78Q8N1N4 RNA5SP215-201ENST00000363440 122 ntBASIC0.59□□□□□ -2.31
KRT78Q8N1N4 Y_RNA.250-201ENST00000364542 110 ntBASIC0.59□□□□□ -2.31
KRT78Q8N1N4 RNU6-669P-201ENST00000365575 107 ntBASIC0.59□□□□□ -2.31
KRT78Q8N1N4 MIR630-201ENST00000384957 97 ntBASIC0.59□□□□□ -2.31
KRT78Q8N1N4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
KRT78Q8N1N4 MIR548E-201ENST00000408287 88 ntBASIC0.59□□□□□ -2.31
KRT78Q8N1N4 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.59□□□□□ -2.31
KRT78Q8N1N4 SNORA40.8-201ENST00000411034 126 ntBASIC0.59□□□□□ -2.31
KRT78Q8N1N4 SCARNA21.1-201ENST00000515996 128 ntBASIC0.59□□□□□ -2.31
KRT78Q8N1N4 Y_RNA.676-201ENST00000516393 96 ntBASIC0.59□□□□□ -2.31
KRT78Q8N1N4 uc_338.17-201ENST00000619633 179 ntBASIC0.59□□□□□ -2.31
KRT78Q8N1N4 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.59□□□□□ -2.31
KRT78Q8N1N4 MIR499A-201ENST00000384903 122 ntBASIC0.58□□□□□ -2.32
KRT78Q8N1N4 HMGN2P22-201ENST00000427588 175 ntBASIC0.58□□□□□ -2.32
KRT78Q8N1N4 Y_RNA.633-201ENST00000459107 95 ntBASIC0.58□□□□□ -2.32
KRT78Q8N1N4 MIR466-201ENST00000580653 84 ntBASIC0.58□□□□□ -2.32
KRT78Q8N1N4 RNU1-29P-201ENST00000606574 126 ntBASIC0.58□□□□□ -2.32
KRT78Q8N1N4 SNORA25.18-201ENST00000607153 114 ntBASIC0.58□□□□□ -2.32
KRT78Q8N1N4 uc_338.10-201ENST00000621872 182 ntBASIC0.58□□□□□ -2.32
KRT78Q8N1N4 Y_RNA.125-201ENST00000363371 111 ntBASIC0.57□□□□□ -2.32
KRT78Q8N1N4 SNORA63.6-201ENST00000364921 119 ntBASIC0.57□□□□□ -2.32
KRT78Q8N1N4 MIR92A1-201ENST00000385233 78 ntBASIC0.57□□□□□ -2.32
KRT78Q8N1N4 SNORA75.1-201ENST00000391130 148 ntBASIC0.57□□□□□ -2.32
KRT78Q8N1N4 MIR6788-201ENST00000618842 66 ntBASIC0.57□□□□□ -2.32
KRT78Q8N1N4 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.57□□□□□ -2.32
KRT78Q8N1N4 RNU6-1079P-201ENST00000362861 110 ntBASIC0.56□□□□□ -2.32
KRT78Q8N1N4 SNORA15B-2-201ENST00000384058 135 ntBASIC0.56□□□□□ -2.32
KRT78Q8N1N4 SNORA15B-1-201ENST00000384334 135 ntBASIC0.56□□□□□ -2.32
KRT78Q8N1N4 U2.7-201ENST00000619197 100 ntBASIC0.56□□□□□ -2.32
KRT78Q8N1N4 RNU6-987P-201ENST00000384759 104 ntBASIC0.55□□□□□ -2.32
KRT78Q8N1N4 MIR518A1-201ENST00000385068 85 ntBASIC0.55□□□□□ -2.32
KRT78Q8N1N4 RNU4-37P-201ENST00000410214 84 ntBASIC0.55□□□□□ -2.32
KRT78Q8N1N4 AC079150.2-201ENST00000443733 78 ntBASIC0.55□□□□□ -2.32
KRT78Q8N1N4 RNU6-1232P-201ENST00000516299 86 ntBASIC0.55□□□□□ -2.32
KRT78Q8N1N4 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
KRT78Q8N1N4 RNU6-940P-201ENST00000363433 104 ntBASIC0.54□□□□□ -2.32
KRT78Q8N1N4 SNORD118-201ENST00000363593 134 ntBASIC0.54□□□□□ -2.32
KRT78Q8N1N4 Y_RNA.423-201ENST00000384057 113 ntBASIC0.54□□□□□ -2.32
KRT78Q8N1N4 MIR517B-201ENST00000385102 67 ntBASIC0.54□□□□□ -2.32
KRT78Q8N1N4 MIR516B1-201ENST00000385211 90 ntBASIC0.54□□□□□ -2.32
KRT78Q8N1N4 MIR548J-201ENST00000408833 112 ntBASIC0.54□□□□□ -2.32
KRT78Q8N1N4 RNU7-174P-201ENST00000516248 59 ntBASIC0.54□□□□□ -2.32
KRT78Q8N1N4 MIR4714-201ENST00000580728 77 ntBASIC0.54□□□□□ -2.32
KRT78Q8N1N4 MIR151B-201ENST00000584249 96 ntBASIC0.54□□□□□ -2.32
KRT78Q8N1N4 RNU6-92P-201ENST00000605893 104 ntBASIC0.54□□□□□ -2.32
KRT78Q8N1N4 AC090617.8-201ENST00000623339 167 ntBASIC0.54□□□□□ -2.32
KRT78Q8N1N4 RNU6-829P-201ENST00000363700 112 ntBASIC0.53□□□□□ -2.32
KRT78Q8N1N4 Y_RNA.226-201ENST00000364337 114 ntBASIC0.53□□□□□ -2.32
KRT78Q8N1N4 RNU6-302P-201ENST00000365249 107 ntBASIC0.53□□□□□ -2.32
KRT78Q8N1N4 RNA5SP247-201ENST00000411181 105 ntBASIC0.53□□□□□ -2.32
KRT78Q8N1N4 RNU6-229P-201ENST00000516614 102 ntBASIC0.53□□□□□ -2.32
KRT78Q8N1N4 CYP3A54P-201ENST00000566950 75 ntBASIC0.53□□□□□ -2.32
KRT78Q8N1N4 MIR5706-201ENST00000579841 80 ntBASIC0.53□□□□□ -2.32
KRT78Q8N1N4 U6.96-201ENST00000636425 70 ntBASIC0.53□□□□□ -2.32
KRT78Q8N1N4 U4.4-201ENST00000620626 117 ntBASIC0.52□□□□□ -2.33
KRT78Q8N1N4 MIR20A-201ENST00000362279 71 ntBASIC0.51□□□□□ -2.33
KRT78Q8N1N4 SNORD60.1-201ENST00000362451 73 ntBASIC0.51□□□□□ -2.33
KRT78Q8N1N4 RNU6-446P-201ENST00000362827 106 ntBASIC0.51□□□□□ -2.33
KRT78Q8N1N4 RNU6-698P-201ENST00000363523 107 ntBASIC0.51□□□□□ -2.33
KRT78Q8N1N4 Y_RNA.224-201ENST00000364308 111 ntBASIC0.51□□□□□ -2.33
KRT78Q8N1N4 RNU6-34P-201ENST00000364874 107 ntBASIC0.51□□□□□ -2.33
KRT78Q8N1N4 SNORA2A-201ENST00000383885 135 ntBASIC0.51□□□□□ -2.33
KRT78Q8N1N4 RNU6-614P-201ENST00000384369 107 ntBASIC0.51□□□□□ -2.33
KRT78Q8N1N4 MIR1287-201ENST00000408492 90 ntBASIC0.51□□□□□ -2.33
KRT78Q8N1N4 RNU6-122P-201ENST00000516818 107 ntBASIC0.51□□□□□ -2.33
KRT78Q8N1N4 MIR5000-201ENST00000577717 103 ntBASIC0.51□□□□□ -2.33
KRT78Q8N1N4 AC243829.6-201ENST00000612652 106 ntBASIC0.51□□□□□ -2.33
KRT78Q8N1N4 U6.59-201ENST00000615686 107 ntBASIC0.51□□□□□ -2.33
KRT78Q8N1N4 RNU6-1246P-201ENST00000391064 107 ntBASIC0.5□□□□□ -2.33
KRT78Q8N1N4 SNORD113-2-201ENST00000391082 72 ntBASIC0.5□□□□□ -2.33
KRT78Q8N1N4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.5□□□□□ -2.33
KRT78Q8N1N4 AC244090.1-201ENST00000441884 93 ntBASIC0.5□□□□□ -2.33
KRT78Q8N1N4 SNORA68.3-201ENST00000515906 83 ntBASIC0.5□□□□□ -2.33
KRT78Q8N1N4 RNU7-188P-201ENST00000517063 64 ntBASIC0.5□□□□□ -2.33
KRT78Q8N1N4 MIR6755-201ENST00000619993 66 ntBASIC0.5□□□□□ -2.33
KRT78Q8N1N4 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.5□□□□□ -2.33
KRT78Q8N1N4 SNORA9.1-201ENST00000362412 131 ntBASIC0.49□□□□□ -2.33
KRT78Q8N1N4 RNA5SP347-201ENST00000362445 119 ntBASIC0.49□□□□□ -2.33
KRT78Q8N1N4 Y_RNA.236-201ENST00000364427 111 ntBASIC0.49□□□□□ -2.33
KRT78Q8N1N4 Y_RNA.325-201ENST00000365171 122 ntBASIC0.49□□□□□ -2.33
KRT78Q8N1N4 MIR3938-201ENST00000582157 103 ntBASIC0.49□□□□□ -2.33
KRT78Q8N1N4 Y_RNA.246-201ENST00000364495 108 ntBASIC0.48□□□□□ -2.33
KRT78Q8N1N4 MIR501-201ENST00000390204 84 ntBASIC0.48□□□□□ -2.33
KRT78Q8N1N4 MIR1255B2-201ENST00000408618 67 ntBASIC0.48□□□□□ -2.33
KRT78Q8N1N4 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.48□□□□□ -2.33
KRT78Q8N1N4 RNU6-518P-201ENST00000516056 96 ntBASIC0.48□□□□□ -2.33
KRT78Q8N1N4 MIR4677-201ENST00000584153 80 ntBASIC0.48□□□□□ -2.33
KRT78Q8N1N4 SNORD114-29-201ENST00000364819 70 ntBASIC0.47□□□□□ -2.33
KRT78Q8N1N4 SNORA41B-201ENST00000384785 128 ntBASIC0.47□□□□□ -2.33
KRT78Q8N1N4 SNORA49-201ENST00000386157 136 ntBASIC0.47□□□□□ -2.33
KRT78Q8N1N4 RNU6-337P-201ENST00000391243 106 ntBASIC0.47□□□□□ -2.33
KRT78Q8N1N4 AC098934.3-201ENST00000430450 190 ntBASIC0.47□□□□□ -2.33
KRT78Q8N1N4 RNU6-175P-201ENST00000516896 107 ntBASIC0.47□□□□□ -2.33
KRT78Q8N1N4 RNU6-1223P-201ENST00000517124 104 ntBASIC0.47□□□□□ -2.33
KRT78Q8N1N4 MIRLET7D-201ENST00000362263 87 ntBASIC0.46□□□□□ -2.34
KRT78Q8N1N4 MIR519A2-201ENST00000384990 87 ntBASIC0.46□□□□□ -2.34
KRT78Q8N1N4 MIR760-201ENST00000390220 80 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 179.5 ms