Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AL157398.1-201ENST00000452981 186 ntBASIC0.98□□□□□ -2.25
NPAS4Q8IUM7 AC021146.9-201ENST00000512503 156 ntBASIC0.98□□□□□ -2.25
NPAS4Q8IUM7 SCARNA17.3-201ENST00000516381 125 ntBASIC0.98□□□□□ -2.25
NPAS4Q8IUM7 RNA5SP517-201ENST00000364724 117 ntBASIC0.97□□□□□ -2.25
NPAS4Q8IUM7 MIR582-201ENST00000365731 98 ntBASIC0.97□□□□□ -2.25
NPAS4Q8IUM7 MIR521-2-201ENST00000384818 87 ntBASIC0.97□□□□□ -2.25
NPAS4Q8IUM7 RPL39P28-201ENST00000465655 155 ntBASIC0.97□□□□□ -2.25
NPAS4Q8IUM7 RNA5SP436-201ENST00000516020 115 ntBASIC0.97□□□□□ -2.25
NPAS4Q8IUM7 MIR4698-201ENST00000577795 80 ntBASIC0.97□□□□□ -2.25
NPAS4Q8IUM7 Y_RNA.250-201ENST00000364542 110 ntBASIC0.96□□□□□ -2.26
NPAS4Q8IUM7 MIR548C-201ENST00000384815 97 ntBASIC0.96□□□□□ -2.26
NPAS4Q8IUM7 MIR633-201ENST00000384821 98 ntBASIC0.96□□□□□ -2.26
NPAS4Q8IUM7 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
NPAS4Q8IUM7 MTND4LP19-201ENST00000403051 166 ntBASIC0.96□□□□□ -2.26
NPAS4Q8IUM7 MIR548V-201ENST00000584165 80 ntBASIC0.96□□□□□ -2.26
NPAS4Q8IUM7 RNA5SP215-201ENST00000363440 122 ntBASIC0.95□□□□□ -2.26
NPAS4Q8IUM7 RNA5SP192-201ENST00000364404 120 ntBASIC0.95□□□□□ -2.26
NPAS4Q8IUM7 RNU6-669P-201ENST00000365575 107 ntBASIC0.95□□□□□ -2.26
NPAS4Q8IUM7 AC069271.1-201ENST00000445577 156 ntBASIC0.95□□□□□ -2.26
NPAS4Q8IUM7 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.95□□□□□ -2.26
NPAS4Q8IUM7 SNORA25.5-201ENST00000363782 126 ntBASIC0.94□□□□□ -2.26
NPAS4Q8IUM7 SNORA33.1-201ENST00000364957 130 ntBASIC0.94□□□□□ -2.26
NPAS4Q8IUM7 MIR548E-201ENST00000408287 88 ntBASIC0.94□□□□□ -2.26
NPAS4Q8IUM7 Y_RNA.633-201ENST00000459107 95 ntBASIC0.94□□□□□ -2.26
NPAS4Q8IUM7 RNU1-29P-201ENST00000606574 126 ntBASIC0.94□□□□□ -2.26
NPAS4Q8IUM7 SNORA25.18-201ENST00000607153 114 ntBASIC0.94□□□□□ -2.26
NPAS4Q8IUM7 MIR6779-201ENST00000617283 64 ntBASIC0.94□□□□□ -2.26
NPAS4Q8IUM7 SCARNA21.1-201ENST00000515996 128 ntBASIC0.93□□□□□ -2.26
NPAS4Q8IUM7 SNORA63.6-201ENST00000364921 119 ntBASIC0.92□□□□□ -2.26
NPAS4Q8IUM7 SNORA40.8-201ENST00000411034 126 ntBASIC0.92□□□□□ -2.26
NPAS4Q8IUM7 HMGN2P22-201ENST00000427588 175 ntBASIC0.92□□□□□ -2.26
NPAS4Q8IUM7 uc_338.10-201ENST00000621872 182 ntBASIC0.92□□□□□ -2.26
NPAS4Q8IUM7 SNORA15B-2-201ENST00000384058 135 ntBASIC0.91□□□□□ -2.26
NPAS4Q8IUM7 SNORA15B-1-201ENST00000384334 135 ntBASIC0.91□□□□□ -2.26
NPAS4Q8IUM7 MIR630-201ENST00000384957 97 ntBASIC0.91□□□□□ -2.26
NPAS4Q8IUM7 AC103810.9-201ENST00000606688 112 ntBASIC0.9□□□□□ -2.27
NPAS4Q8IUM7 U2.7-201ENST00000619197 100 ntBASIC0.9□□□□□ -2.27
NPAS4Q8IUM7 Y_RNA.125-201ENST00000363371 111 ntBASIC0.89□□□□□ -2.27
NPAS4Q8IUM7 MIR466-201ENST00000580653 84 ntBASIC0.89□□□□□ -2.27
NPAS4Q8IUM7 MIR4714-201ENST00000580728 77 ntBASIC0.89□□□□□ -2.27
NPAS4Q8IUM7 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.89□□□□□ -2.27
NPAS4Q8IUM7 SNORA75.1-201ENST00000391130 148 ntBASIC0.88□□□□□ -2.27
NPAS4Q8IUM7 RNA5SP121-201ENST00000516537 101 ntBASIC0.88□□□□□ -2.27
NPAS4Q8IUM7 RNU6-1079P-201ENST00000362861 110 ntBASIC0.87□□□□□ -2.27
NPAS4Q8IUM7 SNORD118-201ENST00000363593 134 ntBASIC0.87□□□□□ -2.27
NPAS4Q8IUM7 RNU6-1232P-201ENST00000516299 86 ntBASIC0.87□□□□□ -2.27
NPAS4Q8IUM7 RNU4-54P-201ENST00000516428 129 ntBASIC0.87□□□□□ -2.27
NPAS4Q8IUM7 RN7SL793P-201ENST00000583259 296 ntBASIC0.87□□□□□ -2.27
NPAS4Q8IUM7 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
NPAS4Q8IUM7 RNU6-302P-201ENST00000365249 107 ntBASIC0.86□□□□□ -2.27
NPAS4Q8IUM7 MIR517B-201ENST00000385102 67 ntBASIC0.86□□□□□ -2.27
NPAS4Q8IUM7 AC079150.2-201ENST00000443733 78 ntBASIC0.86□□□□□ -2.27
NPAS4Q8IUM7 RNU7-174P-201ENST00000516248 59 ntBASIC0.86□□□□□ -2.27
NPAS4Q8IUM7 MIR5706-201ENST00000579841 80 ntBASIC0.86□□□□□ -2.27
NPAS4Q8IUM7 RNU6-940P-201ENST00000363433 104 ntBASIC0.85□□□□□ -2.27
NPAS4Q8IUM7 SNORD114-2-201ENST00000363953 78 ntBASIC0.85□□□□□ -2.27
NPAS4Q8IUM7 RNU6-945P-201ENST00000383947 107 ntBASIC0.85□□□□□ -2.27
NPAS4Q8IUM7 Y_RNA.423-201ENST00000384057 113 ntBASIC0.85□□□□□ -2.27
NPAS4Q8IUM7 MIR216A-201ENST00000385063 110 ntBASIC0.85□□□□□ -2.27
NPAS4Q8IUM7 MIR516B1-201ENST00000385211 90 ntBASIC0.85□□□□□ -2.27
NPAS4Q8IUM7 RNU6-92P-201ENST00000605893 104 ntBASIC0.85□□□□□ -2.27
NPAS4Q8IUM7 U6.96-201ENST00000636425 70 ntBASIC0.85□□□□□ -2.27
NPAS4Q8IUM7 MIR518A1-201ENST00000385068 85 ntBASIC0.84□□□□□ -2.27
NPAS4Q8IUM7 RNU4-37P-201ENST00000410214 84 ntBASIC0.84□□□□□ -2.27
NPAS4Q8IUM7 RNU6-351P-201ENST00000516097 100 ntBASIC0.84□□□□□ -2.27
NPAS4Q8IUM7 AC090617.8-201ENST00000623339 167 ntBASIC0.84□□□□□ -2.27
NPAS4Q8IUM7 SNORA2A-201ENST00000383885 135 ntBASIC0.83□□□□□ -2.28
NPAS4Q8IUM7 RNU6-987P-201ENST00000384759 104 ntBASIC0.83□□□□□ -2.28
NPAS4Q8IUM7 RNU6-229P-201ENST00000516614 102 ntBASIC0.83□□□□□ -2.28
NPAS4Q8IUM7 U4.4-201ENST00000620626 117 ntBASIC0.83□□□□□ -2.28
NPAS4Q8IUM7 MIR6835-201ENST00000621552 64 ntBASIC0.83□□□□□ -2.28
NPAS4Q8IUM7 RNU6-829P-201ENST00000363700 112 ntBASIC0.82□□□□□ -2.28
NPAS4Q8IUM7 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.82□□□□□ -2.28
NPAS4Q8IUM7 CYP3A54P-201ENST00000566950 75 ntBASIC0.82□□□□□ -2.28
NPAS4Q8IUM7 MIR6513-201ENST00000621188 64 ntBASIC0.82□□□□□ -2.28
NPAS4Q8IUM7 MIR6866-201ENST00000638146 69 ntBASIC0.82□□□□□ -2.28
NPAS4Q8IUM7 MIR20A-201ENST00000362279 71 ntBASIC0.81□□□□□ -2.28
NPAS4Q8IUM7 SNORD60.1-201ENST00000362451 73 ntBASIC0.81□□□□□ -2.28
NPAS4Q8IUM7 RNU6-698P-201ENST00000363523 107 ntBASIC0.81□□□□□ -2.28
NPAS4Q8IUM7 RNU6-34P-201ENST00000364874 107 ntBASIC0.81□□□□□ -2.28
NPAS4Q8IUM7 MIR508-201ENST00000384857 115 ntBASIC0.81□□□□□ -2.28
NPAS4Q8IUM7 AC244090.1-201ENST00000441884 93 ntBASIC0.81□□□□□ -2.28
NPAS4Q8IUM7 RNU6-863P-201ENST00000515989 104 ntBASIC0.81□□□□□ -2.28
NPAS4Q8IUM7 AC243829.6-201ENST00000612652 106 ntBASIC0.81□□□□□ -2.28
NPAS4Q8IUM7 MIR6755-201ENST00000619993 66 ntBASIC0.81□□□□□ -2.28
NPAS4Q8IUM7 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.8□□□□□ -2.28
NPAS4Q8IUM7 RNA5SP325-201ENST00000363756 130 ntBASIC0.8□□□□□ -2.28
NPAS4Q8IUM7 RNU6-122P-201ENST00000516818 107 ntBASIC0.8□□□□□ -2.28
NPAS4Q8IUM7 RNU6-614P-201ENST00000384369 107 ntBASIC0.79□□□□□ -2.28
NPAS4Q8IUM7 SNORD113-2-201ENST00000391082 72 ntBASIC0.79□□□□□ -2.28
NPAS4Q8IUM7 RNU7-188P-201ENST00000517063 64 ntBASIC0.79□□□□□ -2.28
NPAS4Q8IUM7 U6.59-201ENST00000615686 107 ntBASIC0.79□□□□□ -2.28
NPAS4Q8IUM7 MIR146A-201ENST00000385201 99 ntBASIC0.78□□□□□ -2.28
NPAS4Q8IUM7 MIR3938-201ENST00000582157 103 ntBASIC0.78□□□□□ -2.28
NPAS4Q8IUM7 RNU6-446P-201ENST00000362827 106 ntBASIC0.77□□□□□ -2.29
NPAS4Q8IUM7 MIR501-201ENST00000390204 84 ntBASIC0.77□□□□□ -2.29
NPAS4Q8IUM7 U7.6-201ENST00000610841 64 ntBASIC0.77□□□□□ -2.29
NPAS4Q8IUM7 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
NPAS4Q8IUM7 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.76□□□□□ -2.29
NPAS4Q8IUM7 SNORA9.1-201ENST00000362412 131 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 225.7 ms